RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
MSH2-204ENST00000461394 FAT2Q9NYQ8 4349 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 Q5VSD8 79 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
MSH2-204ENST00000461394 SPINK1P00995 79 aa3.93□□□□□ -1.78
MSH2-204ENST00000461394 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
MSH2-204ENST00000461394 KRTAP29-1A8MX34 341 aaPredicted RBP3.92□□□□□ -1.78
MSH2-204ENST00000461394 MP68P56378 58 aa3.92□□□□□ -1.78
MSH2-204ENST00000461394 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
MSH2-204ENST00000461394 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
MSH2-204ENST00000461394 C8orf87E5RJ46 101 aa3.91□□□□□ -1.78
MSH2-204ENST00000461394 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
MSH2-204ENST00000461394 C1orf195Q5TG92 126 aa3.91□□□□□ -1.78
MSH2-204ENST00000461394 Q5XG85 94 aa3.91□□□□□ -1.78
MSH2-204ENST00000461394 H0Y9P7 68 aa3.9□□□□□ -1.79
MSH2-204ENST00000461394 LINC00313P59037 77 aa3.9□□□□□ -1.79
MSH2-204ENST00000461394 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
MSH2-204ENST00000461394 MRPL34Q9BQ48 92 aaKnown RBP3.9□□□□□ -1.79
MSH2-204ENST00000461394 RYR2Q92736 4967 aa3.89□□□□□ -1.79
MSH2-204ENST00000461394 TMEM258P61165 79 aa3.89□□□□□ -1.79
MSH2-204ENST00000461394 KLKP1Q107X0 134 aa3.89□□□□□ -1.79
MSH2-204ENST00000461394 CYSTM1Q9H1C7 97 aa3.89□□□□□ -1.79
MSH2-204ENST00000461394 TP53AIP1Q9HCN2 124 aa3.89□□□□□ -1.79
MSH2-204ENST00000461394 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
MSH2-204ENST00000461394 NDUFC1O43677 76 aa3.88□□□□□ -1.79
MSH2-204ENST00000461394 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
MSH2-204ENST00000461394 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
MSH2-204ENST00000461394 TRAV22A0A0B4J277 110 aa3.87□□□□□ -1.79
MSH2-204ENST00000461394 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
MSH2-204ENST00000461394 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
MSH2-204ENST00000461394 RPS29P62273 56 aaKnown RBP3.87□□□□□ -1.79
MSH2-204ENST00000461394 DYNC1H1Q14204 4646 aaKnown RBP3.85□□□□□ -1.79
MSH2-204ENST00000461394 H3BPC8 53 aa3.85□□□□□ -1.79
MSH2-204ENST00000461394 H7BZZ5 65 aa3.85□□□□□ -1.79
MSH2-204ENST00000461394 C1orf64Q8NEQ6 169 aa3.85□□□□□ -1.79
MSH2-204ENST00000461394 Q8N1X5 172 aa3.84□□□□□ -1.79
MSH2-204ENST00000461394 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
MSH2-204ENST00000461394 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.8
MSH2-204ENST00000461394 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
MSH2-204ENST00000461394 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
MSH2-204ENST00000461394 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
MSH2-204ENST00000461394 PCOTHQ58A44 107 aa3.81□□□□□ -1.8
MSH2-204ENST00000461394 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
MSH2-204ENST00000461394 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
MSH2-204ENST00000461394 PRR4Q16378 134 aa3.8□□□□□ -1.8
MSH2-204ENST00000461394 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
MSH2-204ENST00000461394 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
MSH2-204ENST00000461394 KMT2CQ8NEZ4 4911 aaKnown RBP3.79□□□□□ -1.8
MSH2-204ENST00000461394 LOC101927531A0A1B0GV80 90 aa3.79□□□□□ -1.8
MSH2-204ENST00000461394 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
MSH2-204ENST00000461394 Q5W150 140 aa3.78□□□□□ -1.8
MSH2-204ENST00000461394 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
MSH2-204ENST00000461394 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
MSH2-204ENST00000461394 PKHD1L1Q86WI1 4243 aa3.76□□□□□ -1.81
MSH2-204ENST00000461394 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
MSH2-204ENST00000461394 IGKV2-30P06310 120 aa3.76□□□□□ -1.81
MSH2-204ENST00000461394 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
MSH2-204ENST00000461394 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
MSH2-204ENST00000461394 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
MSH2-204ENST00000461394 OXTP01178 125 aa3.74□□□□□ -1.81
MSH2-204ENST00000461394 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
MSH2-204ENST00000461394 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
MSH2-204ENST00000461394 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
MSH2-204ENST00000461394 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
MSH2-204ENST00000461394 CYP4F30PQ9H0H9 118 aa3.73□□□□□ -1.81
MSH2-204ENST00000461394 RYR3Q15413 4870 aa3.73□□□□□ -1.81
MSH2-204ENST00000461394 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
MSH2-204ENST00000461394 A8MUU9 505 aa3.71□□□□□ -1.82
MSH2-204ENST00000461394 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
MSH2-204ENST00000461394 FAT1Q14517 4588 aa3.7□□□□□ -1.82
MSH2-204ENST00000461394 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
MSH2-204ENST00000461394 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
MSH2-204ENST00000461394 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
MSH2-204ENST00000461394 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
MSH2-204ENST00000461394 HRES1P13985 223 aa3.69□□□□□ -1.82
MSH2-204ENST00000461394 ATP11AUNQ6ZP68 121 aa3.69□□□□□ -1.82
MSH2-204ENST00000461394 HSPG2P98160 4391 aa3.69□□□□□ -1.82
MSH2-204ENST00000461394 COA5Q86WW8 74 aa3.68□□□□□ -1.82
MSH2-204ENST00000461394 FLG2Q5D862 2391 aaPredicted RBP3.68□□□□□ -1.82
MSH2-204ENST00000461394 RYR1P21817 5038 aa3.67□□□□□ -1.82
MSH2-204ENST00000461394 XP32Q5T750 250 aa3.67□□□□□ -1.82
MSH2-204ENST00000461394 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
MSH2-204ENST00000461394 ACYP2P14621 99 aa3.66□□□□□ -1.82
MSH2-204ENST00000461394 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
MSH2-204ENST00000461394 SPINK7P58062 85 aa3.63□□□□□ -1.83
MSH2-204ENST00000461394 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
MSH2-204ENST00000461394 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
MSH2-204ENST00000461394 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
MSH2-204ENST00000461394 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
MSH2-204ENST00000461394 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
MSH2-204ENST00000461394 V9GYY9 64 aa3.6□□□□□ -1.83
MSH2-204ENST00000461394 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
MSH2-204ENST00000461394 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
MSH2-204ENST00000461394 TNXBP22105 4242 aa3.58□□□□□ -1.84
MSH2-204ENST00000461394 DMBT1Q9UGM3 2413 aaPredicted RBP3.58□□□□□ -1.84
MSH2-204ENST00000461394 A8MUN3 132 aa3.58□□□□□ -1.84
MSH2-204ENST00000461394 PSPHP1O15172 72 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms