RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 BPY2O14599 106 aa5.59□□□□□ -1.51
UPF2-204ENST00000460569 A0A1B0GVX0 72 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 A8MWP4 228 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 J3QR89 54 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 NDUFB1O75438 58 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 DSCR10P59022 87 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 LPAP08519 4548 aa5.58□□□□□ -1.52
UPF2-204ENST00000460569 XP32Q5T750 250 aa5.57□□□□□ -1.52
UPF2-204ENST00000460569 IGKV3D-7A0A0C4DH55 119 aa5.56□□□□□ -1.52
UPF2-204ENST00000460569 C8orf87E5RJ46 101 aa5.55□□□□□ -1.52
UPF2-204ENST00000460569 K7EQZ3 153 aa5.55□□□□□ -1.52
UPF2-204ENST00000460569 LINC00313P59037 77 aa5.55□□□□□ -1.52
UPF2-204ENST00000460569 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
UPF2-204ENST00000460569 PRR15Q8IV56 129 aa5.54□□□□□ -1.52
UPF2-204ENST00000460569 Q8N9L7 120 aa5.53□□□□□ -1.52
UPF2-204ENST00000460569 LRP2P98164 4655 aa5.53□□□□□ -1.52
UPF2-204ENST00000460569 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
UPF2-204ENST00000460569 CXCL6P80162 114 aa5.51□□□□□ -1.53
UPF2-204ENST00000460569 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
UPF2-204ENST00000460569 K7ERU9 68 aa5.5□□□□□ -1.53
UPF2-204ENST00000460569 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
UPF2-204ENST00000460569 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
UPF2-204ENST00000460569 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
UPF2-204ENST00000460569 LINC00643Q86TS7 51 aa5.49□□□□□ -1.53
UPF2-204ENST00000460569 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
UPF2-204ENST00000460569 Q75L30 129 aa5.48□□□□□ -1.53
UPF2-204ENST00000460569 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
UPF2-204ENST00000460569 A8MUU9 505 aa5.47□□□□□ -1.53
UPF2-204ENST00000460569 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
UPF2-204ENST00000460569 WFDC13Q8IUB5 93 aa5.46□□□□□ -1.54
UPF2-204ENST00000460569 TMEM254Q8TBM7 123 aa5.46□□□□□ -1.54
UPF2-204ENST00000460569 PCOTHQ58A44 107 aa5.45□□□□□ -1.54
UPF2-204ENST00000460569 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
UPF2-204ENST00000460569 HCG22E2RYF7 251 aa5.44□□□□□ -1.54
UPF2-204ENST00000460569 HIST1H4AP62805 103 aaKnown RBP5.44□□□□□ -1.54
UPF2-204ENST00000460569 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
UPF2-204ENST00000460569 ATP11AUNQ6ZP68 121 aa5.43□□□□□ -1.54
UPF2-204ENST00000460569 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
UPF2-204ENST00000460569 NDUFS5O43920 106 aa5.41□□□□□ -1.54
UPF2-204ENST00000460569 LCE2BO14633 110 aa5.4□□□□□ -1.54
UPF2-204ENST00000460569 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
UPF2-204ENST00000460569 A0A087WVE0 104 aa5.39□□□□□ -1.55
UPF2-204ENST00000460569 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
UPF2-204ENST00000460569 ZCCHC13Q8WW36 166 aaKnown RBP5.37□□□□□ -1.55
UPF2-204ENST00000460569 MT-ATP8P03928 68 aa5.36□□□□□ -1.55
UPF2-204ENST00000460569 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
UPF2-204ENST00000460569 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
UPF2-204ENST00000460569 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
UPF2-204ENST00000460569 Q5W150 140 aa5.3□□□□□ -1.56
UPF2-204ENST00000460569 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
UPF2-204ENST00000460569 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
UPF2-204ENST00000460569 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
UPF2-204ENST00000460569 SPINK7P58062 85 aa5.26□□□□□ -1.57
UPF2-204ENST00000460569 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
UPF2-204ENST00000460569 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
UPF2-204ENST00000460569 UQCRQO14949 82 aa5.25□□□□□ -1.57
UPF2-204ENST00000460569 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
UPF2-204ENST00000460569 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
UPF2-204ENST00000460569 A0A0U1RQV1 116 aa5.24□□□□□ -1.57
UPF2-204ENST00000460569 C7orf65Q6ZTY9 151 aa5.24□□□□□ -1.57
UPF2-204ENST00000460569 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
UPF2-204ENST00000460569 HRES1P13985 223 aa5.22□□□□□ -1.57
UPF2-204ENST00000460569 MUC2Q02817 5179 aa5.22□□□□□ -1.57
UPF2-204ENST00000460569 H0Y9P7 68 aa5.21□□□□□ -1.58
UPF2-204ENST00000460569 ATOX1O00244 68 aa5.19□□□□□ -1.58
UPF2-204ENST00000460569 COX6B2Q6YFQ2 88 aa5.19□□□□□ -1.58
UPF2-204ENST00000460569 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
UPF2-204ENST00000460569 LOC101927531A0A1B0GV80 90 aa5.18□□□□□ -1.58
UPF2-204ENST00000460569 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 MP68P56378 58 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 KRTAP19-2Q3LHN2 52 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
UPF2-204ENST00000460569 C5orf47Q569G3 176 aa5.16□□□□□ -1.58
UPF2-204ENST00000460569 MPLKIPQ8TAP9 179 aa5.16□□□□□ -1.58
UPF2-204ENST00000460569 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
UPF2-204ENST00000460569 LINC00208Q96KT6 92 aa5.15□□□□□ -1.59
UPF2-204ENST00000460569 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
UPF2-204ENST00000460569 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
UPF2-204ENST00000460569 H3BPC8 53 aa5.12□□□□□ -1.59
UPF2-204ENST00000460569 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
UPF2-204ENST00000460569 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
UPF2-204ENST00000460569 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
UPF2-204ENST00000460569 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
UPF2-204ENST00000460569 MT1HP80294 61 aa5.07□□□□□ -1.6
UPF2-204ENST00000460569 LORP23490 312 aaPredicted RBP5.06□□□□□ -1.6
UPF2-204ENST00000460569 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
UPF2-204ENST00000460569 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
UPF2-204ENST00000460569 M0R2T5 61 aa5.04□□□□□ -1.6
UPF2-204ENST00000460569 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
UPF2-204ENST00000460569 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
UPF2-204ENST00000460569 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
UPF2-204ENST00000460569 COX7CP15954 63 aa5.02□□□□□ -1.61
UPF2-204ENST00000460569 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
UPF2-204ENST00000460569 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
UPF2-204ENST00000460569 A8MUN3 132 aa4.96□□□□□ -1.62
UPF2-204ENST00000460569 S4R3F8 94 aa4.96□□□□□ -1.62
UPF2-204ENST00000460569 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
UPF2-204ENST00000460569 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms