RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 A0A1B0GVX0 72 aa12.77□□□□□ -0.37
PBRM1-218ENST00000458294 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
PBRM1-218ENST00000458294 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.37
PBRM1-218ENST00000458294 SPINK7P58062 85 aa12.75□□□□□ -0.37
PBRM1-218ENST00000458294 FXYD2P54710 66 aa12.73□□□□□ -0.37
PBRM1-218ENST00000458294 A8MWP4 228 aa12.72□□□□□ -0.37
PBRM1-218ENST00000458294 UBE2V1Q13404 147 aa12.68□□□□□ -0.38
PBRM1-218ENST00000458294 VAMP8Q9BV40 100 aa12.68□□□□□ -0.38
PBRM1-218ENST00000458294 PSMB2P49721 201 aa12.66□□□□□ -0.38
PBRM1-218ENST00000458294 S100A1P23297 94 aa12.65□□□□□ -0.38
PBRM1-218ENST00000458294 VPS25Q9BRG1 176 aa12.64□□□□□ -0.39
PBRM1-218ENST00000458294 J3KT08 172 aa12.63□□□□□ -0.39
PBRM1-218ENST00000458294 COX6CP09669 75 aa12.63□□□□□ -0.39
PBRM1-218ENST00000458294 Q8N9P0 234 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-218ENST00000458294 WFDC13Q8IUB5 93 aa12.59□□□□□ -0.39
PBRM1-218ENST00000458294 RBM3P98179 157 aaKnown RBP12.57□□□□□ -0.4
PBRM1-218ENST00000458294 C21orf62-AS1Q17RA5 79 aa12.57□□□□□ -0.4
PBRM1-218ENST00000458294 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
PBRM1-218ENST00000458294 K7ERJ3 54 aa12.55□□□□□ -0.4
PBRM1-218ENST00000458294 KRTAP6-3Q3LI67 103 aa12.55□□□□□ -0.4
PBRM1-218ENST00000458294 NDUFB1O75438 58 aa12.53□□□□□ -0.4
PBRM1-218ENST00000458294 HSD52Q0P140 79 aa12.52□□□□□ -0.41
PBRM1-218ENST00000458294 LYRM7Q5U5X0 104 aa12.49□□□□□ -0.41
PBRM1-218ENST00000458294 Q6ZQT0 140 aa12.48□□□□□ -0.41
PBRM1-218ENST00000458294 C9JAW5 83 aa12.46□□□□□ -0.41
PBRM1-218ENST00000458294 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
PBRM1-218ENST00000458294 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
PBRM1-218ENST00000458294 IGKV3D-7A0A0C4DH55 119 aa12.36□□□□□ -0.43
PBRM1-218ENST00000458294 H1FX-AS1Q4G0G2 97 aa12.36□□□□□ -0.43
PBRM1-218ENST00000458294 Q6ZVQ6 151 aa12.36□□□□□ -0.43
PBRM1-218ENST00000458294 BAALC-AS2P0C853 105 aa12.35□□□□□ -0.43
PBRM1-218ENST00000458294 A0A1B0GW54 56 aa12.33□□□□□ -0.44
PBRM1-218ENST00000458294 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
PBRM1-218ENST00000458294 PRR15Q8IV56 129 aa12.25□□□□□ -0.45
PBRM1-218ENST00000458294 LOC110117498A0A087WWA1 95 aa12.24□□□□□ -0.45
PBRM1-218ENST00000458294 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
PBRM1-218ENST00000458294 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
PBRM1-218ENST00000458294 MRPL34Q9BQ48 92 aaKnown RBP12.23□□□□□ -0.45
PBRM1-218ENST00000458294 NEBP20929 6669 aa12.22□□□□□ -0.45
PBRM1-218ENST00000458294 UQCR10Q9UDW1 63 aa12.22□□□□□ -0.45
PBRM1-218ENST00000458294 MMP24-AS1A0A0U1RRL7 71 aa12.19□□□□□ -0.46
PBRM1-218ENST00000458294 PDE6GP18545 87 aa12.19□□□□□ -0.46
PBRM1-218ENST00000458294 MUC12Q9UKN1 5478 aa12.13□□□□□ -0.47
PBRM1-218ENST00000458294 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
PBRM1-218ENST00000458294 NREPQ16612 68 aa12.13□□□□□ -0.47
PBRM1-218ENST00000458294 hDV103S1A0JD37 113 aa12.11□□□□□ -0.47
PBRM1-218ENST00000458294 NDUFS5O43920 106 aa12.11□□□□□ -0.47
PBRM1-218ENST00000458294 IGKV2D-30A0A075B6S6 120 aa12.09□□□□□ -0.47
PBRM1-218ENST00000458294 IGKV2-30P06310 120 aa12.09□□□□□ -0.47
PBRM1-218ENST00000458294 C7orf65Q6ZTY9 151 aa12.09□□□□□ -0.47
PBRM1-218ENST00000458294 C14orf132Q9NPU4 83 aa12.09□□□□□ -0.47
PBRM1-218ENST00000458294 A6NN06 94 aa12.05□□□□□ -0.48
PBRM1-218ENST00000458294 K7EQZ3 153 aa12.03□□□□□ -0.48
PBRM1-218ENST00000458294 Q5W150 140 aa12□□□□□ -0.49
PBRM1-218ENST00000458294 NAA38Q9BRA0 125 aaKnown RBP11.97□□□□□ -0.49
PBRM1-218ENST00000458294 FAM236AA0A1B0GUQ0 79 aa11.95□□□□□ -0.5
PBRM1-218ENST00000458294 FAM236BA0A1B0GV22 79 aa11.95□□□□□ -0.5
PBRM1-218ENST00000458294 MT1BP07438 61 aa11.95□□□□□ -0.5
PBRM1-218ENST00000458294 C4orf26Q17RF5 130 aa11.94□□□□□ -0.5
PBRM1-218ENST00000458294 Q5VV11 94 aa11.94□□□□□ -0.5
PBRM1-218ENST00000458294 C5orf47Q569G3 176 aa11.92□□□□□ -0.5
PBRM1-218ENST00000458294 M0R143 59 aa11.88□□□□□ -0.51
PBRM1-218ENST00000458294 KRTAP19-8Q3LI54 63 aa11.87□□□□□ -0.51
PBRM1-218ENST00000458294 KRTAP20-1Q3LI63 56 aa11.87□□□□□ -0.51
PBRM1-218ENST00000458294 BPY2O14599 106 aa11.86□□□□□ -0.51
PBRM1-218ENST00000458294 SPRR2GQ9BYE4 73 aa11.86□□□□□ -0.51
PBRM1-218ENST00000458294 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
PBRM1-218ENST00000458294 KRTAP10-5P60370 271 aa11.81□□□□□ -0.52
PBRM1-218ENST00000458294 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
PBRM1-218ENST00000458294 S4R3F8 94 aa11.79□□□□□ -0.52
PBRM1-218ENST00000458294 CXCL6P80162 114 aa11.78□□□□□ -0.52
PBRM1-218ENST00000458294 KRTAP5-9P26371 169 aa11.77□□□□□ -0.53
PBRM1-218ENST00000458294 CSAG1Q6PB30 78 aa11.77□□□□□ -0.53
PBRM1-218ENST00000458294 KRTAP3-1Q9BYR8 98 aa11.74□□□□□ -0.53
PBRM1-218ENST00000458294 Q8N9L7 120 aa11.73□□□□□ -0.53
PBRM1-218ENST00000458294 MDN1Q9NU22 5596 aa11.73□□□□□ -0.53
PBRM1-218ENST00000458294 H3BT86 120 aa11.71□□□□□ -0.53
PBRM1-218ENST00000458294 KMT2DO14686 5537 aa11.7□□□□□ -0.54
PBRM1-218ENST00000458294 LCA10Q71F78 164 aa11.69□□□□□ -0.54
PBRM1-218ENST00000458294 TMA7Q9Y2S6 64 aaKnown RBP11.67□□□□□ -0.54
PBRM1-218ENST00000458294 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
PBRM1-218ENST00000458294 C1orf64Q8NEQ6 169 aa11.66□□□□□ -0.54
PBRM1-218ENST00000458294 TSTD3H0UI37 97 aa11.59□□□□□ -0.55
PBRM1-218ENST00000458294 IMUPQ9GZP8 106 aa11.52□□□□□ -0.57
PBRM1-218ENST00000458294 BATFQ16520 125 aa11.49□□□□□ -0.57
PBRM1-218ENST00000458294 C9orf118A6NHY6 69 aa11.48□□□□□ -0.57
PBRM1-218ENST00000458294 CRIPTQ9P021 101 aa11.48□□□□□ -0.57
PBRM1-218ENST00000458294 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
PBRM1-218ENST00000458294 A0A1W2PPM0 123 aa11.45□□□□□ -0.58
PBRM1-218ENST00000458294 KRTAP2-3P0C7H8 128 aa11.43□□□□□ -0.58
PBRM1-218ENST00000458294 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-218ENST00000458294 KRTAP2-4Q9BYR9 128 aa11.43□□□□□ -0.58
PBRM1-218ENST00000458294 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
PBRM1-218ENST00000458294 TP53AIP1Q9HCN2 124 aa11.4□□□□□ -0.58
PBRM1-218ENST00000458294 TAX1BP3O14907 124 aa11.37□□□□□ -0.59
PBRM1-218ENST00000458294 SMIM6P0DI80 62 aa11.36□□□□□ -0.59
PBRM1-218ENST00000458294 SPRR2FQ96RM1 72 aa11.27□□□□□ -0.61
PBRM1-218ENST00000458294 A0A087WVE0 104 aa11.25□□□□□ -0.61
PBRM1-218ENST00000458294 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
PBRM1-218ENST00000458294 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms