RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KRTAP10-6P60371 365 aaPredicted RBP8.36□□□□□ -1.07
CPSF6-203ENST00000456847 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
CPSF6-203ENST00000456847 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
CPSF6-203ENST00000456847 J3KT08 172 aa8.34□□□□□ -1.07
CPSF6-203ENST00000456847 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
CPSF6-203ENST00000456847 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
CPSF6-203ENST00000456847 Q6ZQT0 140 aa8.33□□□□□ -1.08
CPSF6-203ENST00000456847 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
CPSF6-203ENST00000456847 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
CPSF6-203ENST00000456847 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-203ENST00000456847 PDE6GP18545 87 aa8.3□□□□□ -1.08
CPSF6-203ENST00000456847 NDUFB1O75438 58 aa8.29□□□□□ -1.08
CPSF6-203ENST00000456847 A0A1B0GW54 56 aa8.27□□□□□ -1.09
CPSF6-203ENST00000456847 FAM236DA0A1B0GTK5 79 aa8.27□□□□□ -1.09
CPSF6-203ENST00000456847 FAM236CP0DP71 79 aa8.27□□□□□ -1.09
CPSF6-203ENST00000456847 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
CPSF6-203ENST00000456847 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
CPSF6-203ENST00000456847 A8MWP4 228 aa8.23□□□□□ -1.09
CPSF6-203ENST00000456847 A0A1W2PPM0 123 aa8.22□□□□□ -1.09
CPSF6-203ENST00000456847 TAX1BP3O14907 124 aa8.22□□□□□ -1.09
CPSF6-203ENST00000456847 RBM12B-AS1Q9P1G2 102 aa8.22□□□□□ -1.09
CPSF6-203ENST00000456847 H3BT86 120 aa8.21□□□□□ -1.09
CPSF6-203ENST00000456847 MTURNQ8N3F0 131 aa8.21□□□□□ -1.09
CPSF6-203ENST00000456847 NREPQ16612 68 aa8.21□□□□□ -1.1
CPSF6-203ENST00000456847 ZCCHC13Q8WW36 166 aaKnown RBP8.21□□□□□ -1.1
CPSF6-203ENST00000456847 C8orf17Q9NRJ1 99 aa8.21□□□□□ -1.1
CPSF6-203ENST00000456847 IGKV3D-7A0A0C4DH55 119 aa8.19□□□□□ -1.1
CPSF6-203ENST00000456847 HRES1P13985 223 aa8.19□□□□□ -1.1
CPSF6-203ENST00000456847 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
CPSF6-203ENST00000456847 CRCT1Q9UGL9 99 aa8.16□□□□□ -1.1
CPSF6-203ENST00000456847 Q6ZVQ6 151 aa8.14□□□□□ -1.11
CPSF6-203ENST00000456847 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
CPSF6-203ENST00000456847 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
CPSF6-203ENST00000456847 SPCS1Q9Y6A9 102 aa8.13□□□□□ -1.11
CPSF6-203ENST00000456847 SPINK7P58062 85 aa8.11□□□□□ -1.11
CPSF6-203ENST00000456847 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
CPSF6-203ENST00000456847 TMEM254Q8TBM7 123 aa8.08□□□□□ -1.12
CPSF6-203ENST00000456847 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
CPSF6-203ENST00000456847 K7EQZ3 153 aa8.07□□□□□ -1.12
CPSF6-203ENST00000456847 BPY2O14599 106 aa8.07□□□□□ -1.12
CPSF6-203ENST00000456847 NDUFS5O43920 106 aa8.05□□□□□ -1.12
CPSF6-203ENST00000456847 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
CPSF6-203ENST00000456847 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
CPSF6-203ENST00000456847 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
CPSF6-203ENST00000456847 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
CPSF6-203ENST00000456847 K7EP34 96 aa8.02□□□□□ -1.13
CPSF6-203ENST00000456847 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
CPSF6-203ENST00000456847 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
CPSF6-203ENST00000456847 PCP4P48539 62 aa7.97□□□□□ -1.13
CPSF6-203ENST00000456847 MT2AP02795 61 aa7.97□□□□□ -1.13
CPSF6-203ENST00000456847 Q8N9L7 120 aa7.97□□□□□ -1.13
CPSF6-203ENST00000456847 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
CPSF6-203ENST00000456847 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
CPSF6-203ENST00000456847 A0A1B0GV90 55 aa7.93□□□□□ -1.14
CPSF6-203ENST00000456847 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
CPSF6-203ENST00000456847 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
CPSF6-203ENST00000456847 IGKV2D-30A0A075B6S6 120 aa7.91□□□□□ -1.14
CPSF6-203ENST00000456847 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
CPSF6-203ENST00000456847 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
CPSF6-203ENST00000456847 MT1FP04733 61 aa7.9□□□□□ -1.14
CPSF6-203ENST00000456847 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
CPSF6-203ENST00000456847 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
CPSF6-203ENST00000456847 F8W1H4 67 aa7.88□□□□□ -1.15
CPSF6-203ENST00000456847 Q5W150 140 aa7.88□□□□□ -1.15
CPSF6-203ENST00000456847 CXCL6P80162 114 aa7.84□□□□□ -1.16
CPSF6-203ENST00000456847 H1FX-AS1Q4G0G2 97 aa7.83□□□□□ -1.16
CPSF6-203ENST00000456847 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
CPSF6-203ENST00000456847 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
CPSF6-203ENST00000456847 LCE2BO14633 110 aa7.76□□□□□ -1.17
CPSF6-203ENST00000456847 C4orf26Q17RF5 130 aa7.74□□□□□ -1.17
CPSF6-203ENST00000456847 USH2AO75445 5202 aa7.74□□□□□ -1.17
CPSF6-203ENST00000456847 TP53AIP1Q9HCN2 124 aa7.69□□□□□ -1.18
CPSF6-203ENST00000456847 SSPOA2VEC9 5147 aa7.66□□□□□ -1.18
CPSF6-203ENST00000456847 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
CPSF6-203ENST00000456847 ACYP1P07311 99 aa7.62□□□□□ -1.19
CPSF6-203ENST00000456847 C1orf64Q8NEQ6 169 aa7.61□□□□□ -1.19
CPSF6-203ENST00000456847 S4R3F8 94 aa7.6□□□□□ -1.19
CPSF6-203ENST00000456847 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-203ENST00000456847 J3QR89 54 aa7.59□□□□□ -1.19
CPSF6-203ENST00000456847 C5orf47Q569G3 176 aa7.59□□□□□ -1.19
CPSF6-203ENST00000456847 FAM240AA0A1B0GVK7 77 aa7.57□□□□□ -1.2
CPSF6-203ENST00000456847 ATP5EP2Q5VTU8 51 aa7.57□□□□□ -1.2
CPSF6-203ENST00000456847 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
CPSF6-203ENST00000456847 HIST1H4AP62805 103 aaKnown RBP7.56□□□□□ -1.2
CPSF6-203ENST00000456847 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
CPSF6-203ENST00000456847 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.2
CPSF6-203ENST00000456847 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.2
CPSF6-203ENST00000456847 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
CPSF6-203ENST00000456847 LCA10Q71F78 164 aa7.51□□□□□ -1.21
CPSF6-203ENST00000456847 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
CPSF6-203ENST00000456847 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
CPSF6-203ENST00000456847 KRTAP9-7A8MTY7 169 aa7.5□□□□□ -1.21
CPSF6-203ENST00000456847 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
CPSF6-203ENST00000456847 K7ERU9 68 aa7.49□□□□□ -1.21
CPSF6-203ENST00000456847 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
CPSF6-203ENST00000456847 UQCRQO14949 82 aa7.46□□□□□ -1.22
CPSF6-203ENST00000456847 H0Y9P7 68 aa7.44□□□□□ -1.22
CPSF6-203ENST00000456847 LINC00643Q86TS7 51 aa7.44□□□□□ -1.22
CPSF6-203ENST00000456847 A0A087WVE0 104 aa7.42□□□□□ -1.22
CPSF6-203ENST00000456847 ATOX1O00244 68 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms