RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 A0A0B4J2C4 111 aa7.74□□□□□ -1.17
UBE2D4-209ENST00000454428 HSBP1L1C9JCN9 74 aa7.73□□□□□ -1.17
UBE2D4-209ENST00000454428 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
UBE2D4-209ENST00000454428 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
UBE2D4-209ENST00000454428 TRIAP1O43715 76 aa7.67□□□□□ -1.18
UBE2D4-209ENST00000454428 COX8AP10176 69 aa7.67□□□□□ -1.18
UBE2D4-209ENST00000454428 LYRM7Q5U5X0 104 aa7.67□□□□□ -1.18
UBE2D4-209ENST00000454428 ORMDL1Q9P0S3 153 aa7.67□□□□□ -1.18
UBE2D4-209ENST00000454428 J3KT08 172 aa7.66□□□□□ -1.18
UBE2D4-209ENST00000454428 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
UBE2D4-209ENST00000454428 HIST1H2BLQ99880 126 aa7.65□□□□□ -1.18
UBE2D4-209ENST00000454428 VPS25Q9BRG1 176 aa7.64□□□□□ -1.19
UBE2D4-209ENST00000454428 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
UBE2D4-209ENST00000454428 DLEU1O43261 78 aa7.62□□□□□ -1.19
UBE2D4-209ENST00000454428 HIST3H2BBQ8N257 126 aa7.62□□□□□ -1.19
UBE2D4-209ENST00000454428 PRO1854Q9UHT4 67 aa7.62□□□□□ -1.19
UBE2D4-209ENST00000454428 H3BQ85 93 aa7.61□□□□□ -1.19
UBE2D4-209ENST00000454428 DNAL4O96015 105 aa7.61□□□□□ -1.19
UBE2D4-209ENST00000454428 DSCR8Q96T75 97 aa7.61□□□□□ -1.19
UBE2D4-209ENST00000454428 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 NDUFB1O75438 58 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 SPRR2EP22531 72 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 SPRR2BP35325 72 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 SPRR2AP35326 72 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 UBE2V1Q13404 147 aa7.59□□□□□ -1.19
UBE2D4-209ENST00000454428 Q6ZVQ6 151 aa7.58□□□□□ -1.2
UBE2D4-209ENST00000454428 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
UBE2D4-209ENST00000454428 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
UBE2D4-209ENST00000454428 HIGD1BQ9P298 99 aa7.58□□□□□ -1.2
UBE2D4-209ENST00000454428 Q6ZQT0 140 aa7.57□□□□□ -1.2
UBE2D4-209ENST00000454428 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
UBE2D4-209ENST00000454428 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
UBE2D4-209ENST00000454428 CEND1Q8N111 149 aa7.55□□□□□ -1.2
UBE2D4-209ENST00000454428 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
UBE2D4-209ENST00000454428 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
UBE2D4-209ENST00000454428 FXYD2P54710 66 aa7.53□□□□□ -1.2
UBE2D4-209ENST00000454428 RBM3P98179 157 aaKnown RBP7.53□□□□□ -1.2
UBE2D4-209ENST00000454428 S100A2P29034 98 aa7.52□□□□□ -1.21
UBE2D4-209ENST00000454428 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
UBE2D4-209ENST00000454428 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
UBE2D4-209ENST00000454428 MRPL34Q9BQ48 92 aaKnown RBP7.48□□□□□ -1.21
UBE2D4-209ENST00000454428 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
UBE2D4-209ENST00000454428 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
UBE2D4-209ENST00000454428 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
UBE2D4-209ENST00000454428 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 A6NJY4 79 aa7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 C4orf26Q17RF5 130 aa7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 TMEM254Q8TBM7 123 aa7.46□□□□□ -1.22
UBE2D4-209ENST00000454428 Q5W150 140 aa7.45□□□□□ -1.22
UBE2D4-209ENST00000454428 GPR98Q8WXG9 6306 aa7.44□□□□□ -1.22
UBE2D4-209ENST00000454428 C9JAW5 83 aa7.44□□□□□ -1.22
UBE2D4-209ENST00000454428 PSMB2P49721 201 aa7.44□□□□□ -1.22
UBE2D4-209ENST00000454428 C7orf65Q6ZTY9 151 aa7.44□□□□□ -1.22
UBE2D4-209ENST00000454428 K7ERJ3 54 aa7.43□□□□□ -1.22
UBE2D4-209ENST00000454428 KLKP1Q107X0 134 aa7.42□□□□□ -1.22
UBE2D4-209ENST00000454428 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
UBE2D4-209ENST00000454428 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
UBE2D4-209ENST00000454428 SPATA45Q537H7 98 aa7.41□□□□□ -1.22
UBE2D4-209ENST00000454428 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
UBE2D4-209ENST00000454428 NDUFS5O43920 106 aa7.39□□□□□ -1.23
UBE2D4-209ENST00000454428 COX6CP09669 75 aa7.39□□□□□ -1.23
UBE2D4-209ENST00000454428 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
UBE2D4-209ENST00000454428 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
UBE2D4-209ENST00000454428 LCA10Q71F78 164 aa7.36□□□□□ -1.23
UBE2D4-209ENST00000454428 S4R3F8 94 aa7.36□□□□□ -1.23
UBE2D4-209ENST00000454428 SPRR2DP22532 72 aa7.34□□□□□ -1.23
UBE2D4-209ENST00000454428 A0A1B0GW54 56 aa7.33□□□□□ -1.24
UBE2D4-209ENST00000454428 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
UBE2D4-209ENST00000454428 K7EQZ3 153 aa7.31□□□□□ -1.24
UBE2D4-209ENST00000454428 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
UBE2D4-209ENST00000454428 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
UBE2D4-209ENST00000454428 S100A6P06703 90 aa7.28□□□□□ -1.24
UBE2D4-209ENST00000454428 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
UBE2D4-209ENST00000454428 HSD52Q0P140 79 aa7.26□□□□□ -1.25
UBE2D4-209ENST00000454428 MT1XP80297 61 aa7.25□□□□□ -1.25
UBE2D4-209ENST00000454428 NREPQ16612 68 aa7.25□□□□□ -1.25
UBE2D4-209ENST00000454428 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
UBE2D4-209ENST00000454428 SCGB1C2P0DMR2 95 aa7.23□□□□□ -1.25
UBE2D4-209ENST00000454428 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
UBE2D4-209ENST00000454428 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
UBE2D4-209ENST00000454428 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
UBE2D4-209ENST00000454428 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
UBE2D4-209ENST00000454428 C14orf132Q9NPU4 83 aa7.2□□□□□ -1.26
UBE2D4-209ENST00000454428 PDE6GP18545 87 aa7.19□□□□□ -1.26
UBE2D4-209ENST00000454428 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
UBE2D4-209ENST00000454428 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
UBE2D4-209ENST00000454428 S100A1P23297 94 aa7.15□□□□□ -1.26
UBE2D4-209ENST00000454428 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
UBE2D4-209ENST00000454428 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
UBE2D4-209ENST00000454428 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.26
UBE2D4-209ENST00000454428 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
UBE2D4-209ENST00000454428 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
UBE2D4-209ENST00000454428 CXCL6P80162 114 aa7.11□□□□□ -1.27
UBE2D4-209ENST00000454428 Q8N9L7 120 aa7.1□□□□□ -1.27
UBE2D4-209ENST00000454428 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
UBE2D4-209ENST00000454428 A0A087WVE0 104 aa7.07□□□□□ -1.28
UBE2D4-209ENST00000454428 BPY2O14599 106 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms