RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
LYSMD3-202ENST00000453259 DNAL4O96015 105 aa6.79□□□□□ -1.32
LYSMD3-202ENST00000453259 CCKP06307 115 aa6.79□□□□□ -1.32
LYSMD3-202ENST00000453259 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
LYSMD3-202ENST00000453259 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
LYSMD3-202ENST00000453259 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
LYSMD3-202ENST00000453259 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
LYSMD3-202ENST00000453259 ORMDL1Q9P0S3 153 aa6.78□□□□□ -1.32
LYSMD3-202ENST00000453259 HIGD1BQ9P298 99 aa6.78□□□□□ -1.32
LYSMD3-202ENST00000453259 J3KT08 172 aa6.77□□□□□ -1.33
LYSMD3-202ENST00000453259 TMEM256-PLSCR3K7ERE1 68 aa6.77□□□□□ -1.33
LYSMD3-202ENST00000453259 WFDC13Q8IUB5 93 aa6.77□□□□□ -1.33
LYSMD3-202ENST00000453259 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.33
LYSMD3-202ENST00000453259 NEBP20929 6669 aa6.74□□□□□ -1.33
LYSMD3-202ENST00000453259 TRIAP1O43715 76 aa6.72□□□□□ -1.33
LYSMD3-202ENST00000453259 DSCR8Q96T75 97 aa6.72□□□□□ -1.33
LYSMD3-202ENST00000453259 UBE2V1Q13404 147 aa6.71□□□□□ -1.34
LYSMD3-202ENST00000453259 NDUFB1O75438 58 aa6.7□□□□□ -1.34
LYSMD3-202ENST00000453259 CEND1Q8N111 149 aa6.69□□□□□ -1.34
LYSMD3-202ENST00000453259 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
LYSMD3-202ENST00000453259 A0A1B0GV72 72 aa6.68□□□□□ -1.34
LYSMD3-202ENST00000453259 COX6CP09669 75 aa6.67□□□□□ -1.34
LYSMD3-202ENST00000453259 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
LYSMD3-202ENST00000453259 LYRM7Q5U5X0 104 aa6.67□□□□□ -1.34
LYSMD3-202ENST00000453259 S100A6P06703 90 aa6.66□□□□□ -1.34
LYSMD3-202ENST00000453259 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
LYSMD3-202ENST00000453259 RBM3P98179 157 aaKnown RBP6.65□□□□□ -1.34
LYSMD3-202ENST00000453259 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
LYSMD3-202ENST00000453259 C2orf91Q6ZV80 131 aa6.65□□□□□ -1.34
LYSMD3-202ENST00000453259 VPS25Q9BRG1 176 aa6.65□□□□□ -1.34
LYSMD3-202ENST00000453259 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
LYSMD3-202ENST00000453259 KRTAP20-1Q3LI63 56 aa6.63□□□□□ -1.35
LYSMD3-202ENST00000453259 PSMB2P49721 201 aa6.62□□□□□ -1.35
LYSMD3-202ENST00000453259 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
LYSMD3-202ENST00000453259 C8orf17Q9NRJ1 99 aa6.62□□□□□ -1.35
LYSMD3-202ENST00000453259 A0A1B0GW54 56 aa6.61□□□□□ -1.35
LYSMD3-202ENST00000453259 FXYD2P54710 66 aa6.61□□□□□ -1.35
LYSMD3-202ENST00000453259 Q6ZQT0 140 aa6.61□□□□□ -1.35
LYSMD3-202ENST00000453259 A6NN06 94 aa6.6□□□□□ -1.35
LYSMD3-202ENST00000453259 SPATA45Q537H7 98 aa6.6□□□□□ -1.35
LYSMD3-202ENST00000453259 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
LYSMD3-202ENST00000453259 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
LYSMD3-202ENST00000453259 C9JAW5 83 aa6.59□□□□□ -1.35
LYSMD3-202ENST00000453259 Q6ZVQ6 151 aa6.58□□□□□ -1.36
LYSMD3-202ENST00000453259 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
LYSMD3-202ENST00000453259 S100A1P23297 94 aa6.56□□□□□ -1.36
LYSMD3-202ENST00000453259 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
LYSMD3-202ENST00000453259 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
LYSMD3-202ENST00000453259 HSD52Q0P140 79 aa6.52□□□□□ -1.37
LYSMD3-202ENST00000453259 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
LYSMD3-202ENST00000453259 Q5VV11 94 aa6.51□□□□□ -1.37
LYSMD3-202ENST00000453259 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
LYSMD3-202ENST00000453259 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
LYSMD3-202ENST00000453259 K7ERJ3 54 aa6.5□□□□□ -1.37
LYSMD3-202ENST00000453259 PDE6GP18545 87 aa6.5□□□□□ -1.37
LYSMD3-202ENST00000453259 JMJD7-PLA2G4BH0Y9G9 81 aa6.48□□□□□ -1.37
LYSMD3-202ENST00000453259 MT1BP07438 61 aa6.48□□□□□ -1.37
LYSMD3-202ENST00000453259 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
LYSMD3-202ENST00000453259 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
LYSMD3-202ENST00000453259 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
LYSMD3-202ENST00000453259 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
LYSMD3-202ENST00000453259 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.38
LYSMD3-202ENST00000453259 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.38
LYSMD3-202ENST00000453259 SCGB1C2P0DMR2 95 aa6.46□□□□□ -1.38
LYSMD3-202ENST00000453259 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
LYSMD3-202ENST00000453259 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
LYSMD3-202ENST00000453259 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
LYSMD3-202ENST00000453259 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
LYSMD3-202ENST00000453259 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
LYSMD3-202ENST00000453259 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
LYSMD3-202ENST00000453259 NDUFS5O43920 106 aa6.42□□□□□ -1.38
LYSMD3-202ENST00000453259 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
LYSMD3-202ENST00000453259 NREPQ16612 68 aa6.41□□□□□ -1.38
LYSMD3-202ENST00000453259 KMT2DO14686 5537 aa6.41□□□□□ -1.38
LYSMD3-202ENST00000453259 MDN1Q9NU22 5596 aa6.39□□□□□ -1.39
LYSMD3-202ENST00000453259 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
LYSMD3-202ENST00000453259 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
LYSMD3-202ENST00000453259 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
LYSMD3-202ENST00000453259 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
LYSMD3-202ENST00000453259 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
LYSMD3-202ENST00000453259 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
LYSMD3-202ENST00000453259 K7EQZ3 153 aa6.34□□□□□ -1.39
LYSMD3-202ENST00000453259 Q5W150 140 aa6.34□□□□□ -1.39
LYSMD3-202ENST00000453259 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
LYSMD3-202ENST00000453259 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
LYSMD3-202ENST00000453259 UQCR10Q9UDW1 63 aa6.32□□□□□ -1.4
LYSMD3-202ENST00000453259 S4R3F8 94 aa6.32□□□□□ -1.4
LYSMD3-202ENST00000453259 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
LYSMD3-202ENST00000453259 CXCL6P80162 114 aa6.29□□□□□ -1.4
LYSMD3-202ENST00000453259 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
LYSMD3-202ENST00000453259 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
LYSMD3-202ENST00000453259 BPY2O14599 106 aa6.26□□□□□ -1.41
LYSMD3-202ENST00000453259 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
LYSMD3-202ENST00000453259 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
LYSMD3-202ENST00000453259 LCA10Q71F78 164 aa6.25□□□□□ -1.41
LYSMD3-202ENST00000453259 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
LYSMD3-202ENST00000453259 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
LYSMD3-202ENST00000453259 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
LYSMD3-202ENST00000453259 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
LYSMD3-202ENST00000453259 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms