RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 NOTCH2NLQ7Z3S9 236 aa13□□□□□ -0.33
CPSF4-207ENST00000451876 A0A1B0GVX0 72 aa12.99□□□□□ -0.33
CPSF4-207ENST00000451876 A8MWP4 228 aa12.97□□□□□ -0.33
CPSF4-207ENST00000451876 LINC00313P59037 77 aa12.96□□□□□ -0.33
CPSF4-207ENST00000451876 IGKV3D-7A0A0C4DH55 119 aa12.95□□□□□ -0.34
CPSF4-207ENST00000451876 MUC2Q02817 5179 aa12.94□□□□□ -0.34
CPSF4-207ENST00000451876 RPL37P61927 97 aaKnown RBP12.94□□□□□ -0.34
CPSF4-207ENST00000451876 UBL5Q9BZL1 73 aa12.93□□□□□ -0.34
CPSF4-207ENST00000451876 KRTAP16-1A8MUX0 517 aa12.92□□□□□ -0.34
CPSF4-207ENST00000451876 NDUFB1O75438 58 aa12.92□□□□□ -0.34
CPSF4-207ENST00000451876 SEC61BP60468 96 aaKnown RBP12.92□□□□□ -0.34
CPSF4-207ENST00000451876 BPY2O14599 106 aa12.91□□□□□ -0.34
CPSF4-207ENST00000451876 C8orf87E5RJ46 101 aa12.89□□□□□ -0.35
CPSF4-207ENST00000451876 K7EQZ3 153 aa12.88□□□□□ -0.35
CPSF4-207ENST00000451876 Q75L30 129 aa12.88□□□□□ -0.35
CPSF4-207ENST00000451876 PRR15Q8IV56 129 aa12.88□□□□□ -0.35
CPSF4-207ENST00000451876 PCOTHQ58A44 107 aa12.87□□□□□ -0.35
CPSF4-207ENST00000451876 C20orf166-AS1Q96NR2 134 aa12.87□□□□□ -0.35
CPSF4-207ENST00000451876 A8MUU9 505 aa12.84□□□□□ -0.35
CPSF4-207ENST00000451876 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
CPSF4-207ENST00000451876 C8orf17Q9NRJ1 99 aa12.84□□□□□ -0.35
CPSF4-207ENST00000451876 Q8N9L7 120 aa12.83□□□□□ -0.36
CPSF4-207ENST00000451876 ACYP1P07311 99 aa12.81□□□□□ -0.36
CPSF4-207ENST00000451876 KRTAP4-1Q9BYQ7 146 aa12.81□□□□□ -0.36
CPSF4-207ENST00000451876 MMP24-AS1A0A0U1RRL7 71 aa12.78□□□□□ -0.36
CPSF4-207ENST00000451876 ATP11AUNQ6ZP68 121 aa12.73□□□□□ -0.37
CPSF4-207ENST00000451876 CXCL6P80162 114 aa12.7□□□□□ -0.38
CPSF4-207ENST00000451876 Q8N9P0 234 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-207ENST00000451876 hDV103S1A0JD37 113 aa12.67□□□□□ -0.38
CPSF4-207ENST00000451876 TMEM254Q8TBM7 123 aa12.66□□□□□ -0.38
CPSF4-207ENST00000451876 MRPL34Q9BQ48 92 aaKnown RBP12.66□□□□□ -0.38
CPSF4-207ENST00000451876 J3QR89 54 aa12.65□□□□□ -0.38
CPSF4-207ENST00000451876 WFDC13Q8IUB5 93 aa12.65□□□□□ -0.38
CPSF4-207ENST00000451876 CASC2Q6XLA1 102 aa12.61□□□□□ -0.39
CPSF4-207ENST00000451876 ATP5EP2Q5VTU8 51 aa12.59□□□□□ -0.39
CPSF4-207ENST00000451876 HCG22E2RYF7 251 aa12.58□□□□□ -0.4
CPSF4-207ENST00000451876 LINC00643Q86TS7 51 aa12.57□□□□□ -0.4
CPSF4-207ENST00000451876 ZCCHC13Q8WW36 166 aaKnown RBP12.55□□□□□ -0.4
CPSF4-207ENST00000451876 NDUFS5O43920 106 aa12.53□□□□□ -0.4
CPSF4-207ENST00000451876 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
CPSF4-207ENST00000451876 K7ERU9 68 aa12.47□□□□□ -0.41
CPSF4-207ENST00000451876 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
CPSF4-207ENST00000451876 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
CPSF4-207ENST00000451876 KRTAP19-2Q3LHN2 52 aa12.42□□□□□ -0.42
CPSF4-207ENST00000451876 A0A087WVE0 104 aa12.41□□□□□ -0.42
CPSF4-207ENST00000451876 Q5W150 140 aa12.39□□□□□ -0.43
CPSF4-207ENST00000451876 LCE2CQ5TA81 110 aa12.34□□□□□ -0.43
CPSF4-207ENST00000451876 SPINK7P58062 85 aa12.33□□□□□ -0.43
CPSF4-207ENST00000451876 HRES1P13985 223 aa12.29□□□□□ -0.44
CPSF4-207ENST00000451876 TP53AIP1Q9HCN2 124 aa12.27□□□□□ -0.44
CPSF4-207ENST00000451876 MT-ATP8P03928 68 aa12.24□□□□□ -0.45
CPSF4-207ENST00000451876 MPLKIPQ8TAP9 179 aa12.23□□□□□ -0.45
CPSF4-207ENST00000451876 LCE2AQ5TA79 106 aaPredicted RBP12.22□□□□□ -0.45
CPSF4-207ENST00000451876 COX6B2Q6YFQ2 88 aa12.22□□□□□ -0.45
CPSF4-207ENST00000451876 IGKV2D-30A0A075B6S6 120 aa12.2□□□□□ -0.46
CPSF4-207ENST00000451876 IGKV2-30P06310 120 aa12.2□□□□□ -0.46
CPSF4-207ENST00000451876 C7orf65Q6ZTY9 151 aa12.17□□□□□ -0.46
CPSF4-207ENST00000451876 IMUPQ9GZP8 106 aa12.15□□□□□ -0.47
CPSF4-207ENST00000451876 MT1HP80294 61 aa12.14□□□□□ -0.47
CPSF4-207ENST00000451876 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
CPSF4-207ENST00000451876 TRAV22A0A0B4J277 110 aa12.11□□□□□ -0.47
CPSF4-207ENST00000451876 FLGP20930 4061 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-207ENST00000451876 UQCRQO14949 82 aa12.09□□□□□ -0.47
CPSF4-207ENST00000451876 FAM236DA0A1B0GTK5 79 aa12.08□□□□□ -0.48
CPSF4-207ENST00000451876 FAM236CP0DP71 79 aa12.08□□□□□ -0.48
CPSF4-207ENST00000451876 OCR1Q9BZK8 76 aa12.08□□□□□ -0.48
CPSF4-207ENST00000451876 H0Y9P7 68 aa12.01□□□□□ -0.49
CPSF4-207ENST00000451876 SCGB1A1P11684 91 aa12.01□□□□□ -0.49
CPSF4-207ENST00000451876 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
CPSF4-207ENST00000451876 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
CPSF4-207ENST00000451876 C4orf26Q17RF5 130 aa11.96□□□□□ -0.5
CPSF4-207ENST00000451876 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.5
CPSF4-207ENST00000451876 LOC101927531A0A1B0GV80 90 aa11.95□□□□□ -0.5
CPSF4-207ENST00000451876 ATOX1O00244 68 aa11.95□□□□□ -0.5
CPSF4-207ENST00000451876 M0R2T5 61 aa11.92□□□□□ -0.5
CPSF4-207ENST00000451876 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
CPSF4-207ENST00000451876 C1orf64Q8NEQ6 169 aa11.88□□□□□ -0.51
CPSF4-207ENST00000451876 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
CPSF4-207ENST00000451876 MP68P56378 58 aa11.86□□□□□ -0.51
CPSF4-207ENST00000451876 H1FX-AS1Q4G0G2 97 aa11.81□□□□□ -0.52
CPSF4-207ENST00000451876 KRTAP3-1Q9BYR8 98 aa11.8□□□□□ -0.52
CPSF4-207ENST00000451876 KRTAP10-6P60371 365 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-207ENST00000451876 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
CPSF4-207ENST00000451876 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
CPSF4-207ENST00000451876 LORP23490 312 aaPredicted RBP11.77□□□□□ -0.53
CPSF4-207ENST00000451876 KLKP1Q107X0 134 aa11.76□□□□□ -0.53
CPSF4-207ENST00000451876 H3BPC8 53 aa11.75□□□□□ -0.53
CPSF4-207ENST00000451876 SERP2Q8N6R1 65 aa11.62□□□□□ -0.55
CPSF4-207ENST00000451876 PCP4P48539 62 aa11.59□□□□□ -0.55
CPSF4-207ENST00000451876 KRTAP9-8Q9BYQ0 159 aa11.57□□□□□ -0.56
CPSF4-207ENST00000451876 S4R3F8 94 aa11.56□□□□□ -0.56
CPSF4-207ENST00000451876 SNURFQ9Y675 71 aa11.54□□□□□ -0.56
CPSF4-207ENST00000451876 LCA10Q71F78 164 aa11.53□□□□□ -0.56
CPSF4-207ENST00000451876 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
CPSF4-207ENST00000451876 A8MUN3 132 aa11.48□□□□□ -0.57
CPSF4-207ENST00000451876 MT2AP02795 61 aa11.47□□□□□ -0.57
CPSF4-207ENST00000451876 COX7CP15954 63 aa11.43□□□□□ -0.58
CPSF4-207ENST00000451876 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
CPSF4-207ENST00000451876 DMAC1Q96GE9 116 aa11.41□□□□□ -0.58
CPSF4-207ENST00000451876 MT1FP04733 61 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms