RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
PRPF40A-204ENST00000450303 BPY2O14599 106 aa9.75□□□□□ -0.85
PRPF40A-204ENST00000450303 COX7CP15954 63 aa9.75□□□□□ -0.85
PRPF40A-204ENST00000450303 SMIM20Q8N5G0 67 aa9.75□□□□□ -0.85
PRPF40A-204ENST00000450303 SPINK1P00995 79 aa9.73□□□□□ -0.85
PRPF40A-204ENST00000450303 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
PRPF40A-204ENST00000450303 IGLV7-46A0A075B6I9 117 aa9.72□□□□□ -0.85
PRPF40A-204ENST00000450303 HRCT1Q6UXD1 115 aa9.72□□□□□ -0.85
PRPF40A-204ENST00000450303 A0A0G2JQZ4 141 aa9.71□□□□□ -0.86
PRPF40A-204ENST00000450303 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-204ENST00000450303 LIMD2Q9BT23 127 aa9.68□□□□□ -0.86
PRPF40A-204ENST00000450303 TRAV7A0A075B6U4 112 aa9.65□□□□□ -0.86
PRPF40A-204ENST00000450303 TPRXLQ17RH7 258 aa9.65□□□□□ -0.86
PRPF40A-204ENST00000450303 MUC2Q02817 5179 aa9.65□□□□□ -0.86
PRPF40A-204ENST00000450303 SS18L2Q9UHA2 77 aa9.63□□□□□ -0.87
PRPF40A-204ENST00000450303 IGKV4-1P06312 121 aa9.62□□□□□ -0.87
PRPF40A-204ENST00000450303 Q5XG85 94 aa9.61□□□□□ -0.87
PRPF40A-204ENST00000450303 A0A087WSZ3 146 aa9.6□□□□□ -0.87
PRPF40A-204ENST00000450303 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-204ENST00000450303 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
PRPF40A-204ENST00000450303 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
PRPF40A-204ENST00000450303 Q8N9L7 120 aa9.56□□□□□ -0.88
PRPF40A-204ENST00000450303 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
PRPF40A-204ENST00000450303 A0A0U1RQV1 116 aa9.53□□□□□ -0.88
PRPF40A-204ENST00000450303 J3KT08 172 aa9.53□□□□□ -0.88
PRPF40A-204ENST00000450303 LCE2BO14633 110 aa9.52□□□□□ -0.89
PRPF40A-204ENST00000450303 DSCR10P59022 87 aa9.51□□□□□ -0.89
PRPF40A-204ENST00000450303 TMEM258P61165 79 aa9.48□□□□□ -0.89
PRPF40A-204ENST00000450303 C1orf195Q5TG92 126 aa9.48□□□□□ -0.89
PRPF40A-204ENST00000450303 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
PRPF40A-204ENST00000450303 HCG22E2RYF7 251 aa9.47□□□□□ -0.89
PRPF40A-204ENST00000450303 K7EQZ3 153 aa9.47□□□□□ -0.89
PRPF40A-204ENST00000450303 NDUFB1O75438 58 aa9.46□□□□□ -0.9
PRPF40A-204ENST00000450303 NDUFC1O43677 76 aa9.44□□□□□ -0.9
PRPF40A-204ENST00000450303 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
PRPF40A-204ENST00000450303 FAT4Q6V0I7 4981 aa9.44□□□□□ -0.9
PRPF40A-204ENST00000450303 A8MWP4 228 aa9.43□□□□□ -0.9
PRPF40A-204ENST00000450303 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
PRPF40A-204ENST00000450303 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
PRPF40A-204ENST00000450303 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
PRPF40A-204ENST00000450303 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
PRPF40A-204ENST00000450303 Q96NJ1 140 aa9.41□□□□□ -0.9
PRPF40A-204ENST00000450303 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
PRPF40A-204ENST00000450303 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
PRPF40A-204ENST00000450303 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
PRPF40A-204ENST00000450303 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
PRPF40A-204ENST00000450303 XP32Q5T750 250 aa9.36□□□□□ -0.91
PRPF40A-204ENST00000450303 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
PRPF40A-204ENST00000450303 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
PRPF40A-204ENST00000450303 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
PRPF40A-204ENST00000450303 C5orf47Q569G3 176 aa9.34□□□□□ -0.91
PRPF40A-204ENST00000450303 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
PRPF40A-204ENST00000450303 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
PRPF40A-204ENST00000450303 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
PRPF40A-204ENST00000450303 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
PRPF40A-204ENST00000450303 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-204ENST00000450303 MP68P56378 58 aa9.3□□□□□ -0.92
PRPF40A-204ENST00000450303 H7BZZ5 65 aa9.29□□□□□ -0.92
PRPF40A-204ENST00000450303 A0A1B0GVX0 72 aa9.28□□□□□ -0.92
PRPF40A-204ENST00000450303 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
PRPF40A-204ENST00000450303 IGHV6-1A0A0B4J1U7 121 aa9.26□□□□□ -0.93
PRPF40A-204ENST00000450303 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
PRPF40A-204ENST00000450303 C8orf87E5RJ46 101 aa9.26□□□□□ -0.93
PRPF40A-204ENST00000450303 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
PRPF40A-204ENST00000450303 H3BPC8 53 aa9.25□□□□□ -0.93
PRPF40A-204ENST00000450303 LINC00313P59037 77 aa9.25□□□□□ -0.93
PRPF40A-204ENST00000450303 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
PRPF40A-204ENST00000450303 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
PRPF40A-204ENST00000450303 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
PRPF40A-204ENST00000450303 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
PRPF40A-204ENST00000450303 SERP1Q9Y6X1 66 aa9.2□□□□□ -0.94
PRPF40A-204ENST00000450303 H0Y9P7 68 aa9.18□□□□□ -0.94
PRPF40A-204ENST00000450303 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
PRPF40A-204ENST00000450303 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
PRPF40A-204ENST00000450303 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
PRPF40A-204ENST00000450303 LINC00208Q96KT6 92 aa9.14□□□□□ -0.95
PRPF40A-204ENST00000450303 NDUFS5O43920 106 aa9.13□□□□□ -0.95
PRPF40A-204ENST00000450303 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
PRPF40A-204ENST00000450303 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
PRPF40A-204ENST00000450303 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
PRPF40A-204ENST00000450303 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
PRPF40A-204ENST00000450303 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
PRPF40A-204ENST00000450303 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
PRPF40A-204ENST00000450303 Q75L30 129 aa9.07□□□□□ -0.96
PRPF40A-204ENST00000450303 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
PRPF40A-204ENST00000450303 A8MUU9 505 aa9.05□□□□□ -0.96
PRPF40A-204ENST00000450303 Q8N9P0 234 aaPredicted RBP9.02□□□□□ -0.97
PRPF40A-204ENST00000450303 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.97
PRPF40A-204ENST00000450303 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
PRPF40A-204ENST00000450303 SMIM26A0A096LP01 95 aa9□□□□□ -0.97
PRPF40A-204ENST00000450303 CYP4F30PQ9H0H9 118 aa9□□□□□ -0.97
PRPF40A-204ENST00000450303 MT1HP80294 61 aa8.99□□□□□ -0.97
PRPF40A-204ENST00000450303 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
PRPF40A-204ENST00000450303 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
PRPF40A-204ENST00000450303 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
PRPF40A-204ENST00000450303 M0R2T5 61 aa8.85□□□□□ -0.99
PRPF40A-204ENST00000450303 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
PRPF40A-204ENST00000450303 Q5W150 140 aa8.82□□□□□ -1
PRPF40A-204ENST00000450303 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
PRPF40A-204ENST00000450303 V9GYY9 64 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms