RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 TMEM256-PLSCR3K7ERE1 68 aa7.6□□□□□ -1.19
TRA2A-203ENST00000448549 S100A1P23297 94 aa7.6□□□□□ -1.19
TRA2A-203ENST00000448549 PSMB2P49721 201 aa7.58□□□□□ -1.2
TRA2A-203ENST00000448549 MTURNQ8N3F0 131 aa7.58□□□□□ -1.2
TRA2A-203ENST00000448549 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
TRA2A-203ENST00000448549 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
TRA2A-203ENST00000448549 K7ERJ3 54 aa7.56□□□□□ -1.2
TRA2A-203ENST00000448549 VPS25Q9BRG1 176 aa7.56□□□□□ -1.2
TRA2A-203ENST00000448549 SPINK7P58062 85 aa7.55□□□□□ -1.2
TRA2A-203ENST00000448549 ZCCHC13Q8WW36 166 aaKnown RBP7.55□□□□□ -1.2
TRA2A-203ENST00000448549 UBE2V1Q13404 147 aa7.54□□□□□ -1.2
TRA2A-203ENST00000448549 COX6CP09669 75 aa7.53□□□□□ -1.2
TRA2A-203ENST00000448549 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
TRA2A-203ENST00000448549 RBM3P98179 157 aaKnown RBP7.5□□□□□ -1.21
TRA2A-203ENST00000448549 HSD52Q0P140 79 aa7.5□□□□□ -1.21
TRA2A-203ENST00000448549 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
TRA2A-203ENST00000448549 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
TRA2A-203ENST00000448549 SYNE2Q8WXH0 6885 aaKnown RBP7.48□□□□□ -1.21
TRA2A-203ENST00000448549 DSCR8Q96T75 97 aa7.48□□□□□ -1.21
TRA2A-203ENST00000448549 J3KT08 172 aa7.47□□□□□ -1.21
TRA2A-203ENST00000448549 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
TRA2A-203ENST00000448549 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
TRA2A-203ENST00000448549 A8MWP4 228 aa7.45□□□□□ -1.22
TRA2A-203ENST00000448549 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
TRA2A-203ENST00000448549 C9JAW5 83 aa7.43□□□□□ -1.22
TRA2A-203ENST00000448549 NDUFB1O75438 58 aa7.43□□□□□ -1.22
TRA2A-203ENST00000448549 SCGB1C2P0DMR2 95 aa7.43□□□□□ -1.22
TRA2A-203ENST00000448549 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
TRA2A-203ENST00000448549 Q6ZQT0 140 aa7.43□□□□□ -1.22
TRA2A-203ENST00000448549 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
TRA2A-203ENST00000448549 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
TRA2A-203ENST00000448549 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
TRA2A-203ENST00000448549 PYY3Q5JQD4 70 aa7.4□□□□□ -1.22
TRA2A-203ENST00000448549 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
TRA2A-203ENST00000448549 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
TRA2A-203ENST00000448549 IGKV3D-7A0A0C4DH55 119 aa7.36□□□□□ -1.23
TRA2A-203ENST00000448549 UQCR10Q9UDW1 63 aa7.35□□□□□ -1.23
TRA2A-203ENST00000448549 Q6ZVQ6 151 aa7.34□□□□□ -1.23
TRA2A-203ENST00000448549 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
TRA2A-203ENST00000448549 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
TRA2A-203ENST00000448549 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
TRA2A-203ENST00000448549 A0A1B0GW54 56 aa7.29□□□□□ -1.24
TRA2A-203ENST00000448549 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
TRA2A-203ENST00000448549 PRR15Q8IV56 129 aa7.29□□□□□ -1.24
TRA2A-203ENST00000448549 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
TRA2A-203ENST00000448549 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
TRA2A-203ENST00000448549 PDE6GP18545 87 aa7.25□□□□□ -1.25
TRA2A-203ENST00000448549 ATXN8Q156A1 80 aa7.25□□□□□ -1.25
TRA2A-203ENST00000448549 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
TRA2A-203ENST00000448549 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
TRA2A-203ENST00000448549 NAA38Q9BRA0 125 aaKnown RBP7.24□□□□□ -1.25
TRA2A-203ENST00000448549 NREPQ16612 68 aa7.23□□□□□ -1.25
TRA2A-203ENST00000448549 NDUFS5O43920 106 aa7.21□□□□□ -1.26
TRA2A-203ENST00000448549 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
TRA2A-203ENST00000448549 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
TRA2A-203ENST00000448549 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
TRA2A-203ENST00000448549 K7EQZ3 153 aa7.18□□□□□ -1.26
TRA2A-203ENST00000448549 Q5W150 140 aa7.16□□□□□ -1.26
TRA2A-203ENST00000448549 C7orf65Q6ZTY9 151 aa7.14□□□□□ -1.27
TRA2A-203ENST00000448549 M0R143 59 aa7.13□□□□□ -1.27
TRA2A-203ENST00000448549 C4orf26Q17RF5 130 aa7.1□□□□□ -1.27
TRA2A-203ENST00000448549 BPY2O14599 106 aa7.07□□□□□ -1.28
TRA2A-203ENST00000448549 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
TRA2A-203ENST00000448549 NEBP20929 6669 aa7.06□□□□□ -1.28
TRA2A-203ENST00000448549 A6NN06 94 aa7.06□□□□□ -1.28
TRA2A-203ENST00000448549 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
TRA2A-203ENST00000448549 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
TRA2A-203ENST00000448549 Q8N9L7 120 aa7.05□□□□□ -1.28
TRA2A-203ENST00000448549 HCG22E2RYF7 251 aa7.04□□□□□ -1.28
TRA2A-203ENST00000448549 MT1BP07438 61 aa7.04□□□□□ -1.28
TRA2A-203ENST00000448549 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
TRA2A-203ENST00000448549 Q5VV11 94 aa7□□□□□ -1.29
TRA2A-203ENST00000448549 H3BT86 120 aa6.99□□□□□ -1.29
TRA2A-203ENST00000448549 CXCL6P80162 114 aa6.99□□□□□ -1.29
TRA2A-203ENST00000448549 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
TRA2A-203ENST00000448549 BATFQ16520 125 aa6.97□□□□□ -1.29
TRA2A-203ENST00000448549 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
TRA2A-203ENST00000448549 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
TRA2A-203ENST00000448549 S4R3F8 94 aa6.97□□□□□ -1.29
TRA2A-203ENST00000448549 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
TRA2A-203ENST00000448549 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
TRA2A-203ENST00000448549 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
TRA2A-203ENST00000448549 LCA10Q71F78 164 aa6.93□□□□□ -1.3
TRA2A-203ENST00000448549 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
TRA2A-203ENST00000448549 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
TRA2A-203ENST00000448549 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
TRA2A-203ENST00000448549 A0A1W2PPM0 123 aa6.9□□□□□ -1.3
TRA2A-203ENST00000448549 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
TRA2A-203ENST00000448549 TAX1BP3O14907 124 aa6.87□□□□□ -1.31
TRA2A-203ENST00000448549 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
TRA2A-203ENST00000448549 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
TRA2A-203ENST00000448549 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
TRA2A-203ENST00000448549 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
TRA2A-203ENST00000448549 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
TRA2A-203ENST00000448549 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
TRA2A-203ENST00000448549 KMT2DO14686 5537 aa6.78□□□□□ -1.32
TRA2A-203ENST00000448549 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
TRA2A-203ENST00000448549 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
TRA2A-203ENST00000448549 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
TRA2A-203ENST00000448549 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms