RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 LRRK2Q5S007 2527 aa2.38□□□□□ -2.03
HMGB1P16-201ENST00000447155 NUPR2A6NF83 97 aa2.38□□□□□ -2.03
HMGB1P16-201ENST00000447155 PTPN13Q12923 2485 aa2.38□□□□□ -2.03
HMGB1P16-201ENST00000447155 BSNQ9UPA5 3926 aa2.38□□□□□ -2.03
HMGB1P16-201ENST00000447155 FN1P02751 2386 aaKnown RBP2.37□□□□□ -2.03
HMGB1P16-201ENST00000447155 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
HMGB1P16-201ENST00000447155 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
HMGB1P16-201ENST00000447155 ALMS1Q8TCU4 4167 aa2.37□□□□□ -2.03
HMGB1P16-201ENST00000447155 APCP25054 2843 aa2.37□□□□□ -2.03
HMGB1P16-201ENST00000447155 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
HMGB1P16-201ENST00000447155 ATMQ13315 3056 aa2.36□□□□□ -2.03
HMGB1P16-201ENST00000447155 ASPMQ8IZT6 3477 aa2.36□□□□□ -2.03
HMGB1P16-201ENST00000447155 COL12A1Q99715 3063 aa2.36□□□□□ -2.03
HMGB1P16-201ENST00000447155 SPINK6Q6UWN8 80 aa2.35□□□□□ -2.03
HMGB1P16-201ENST00000447155 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
HMGB1P16-201ENST00000447155 CRYBG3Q68DQ2 2970 aa2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 TENM2Q9NT68 2774 aa2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 USP9XQ93008 2570 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 SSBP3-AS1Q7Z2R9 100 aa2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 KRTAP13-1Q8IUC0 172 aa2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 MUC6Q6W4X9 2439 aa2.34□□□□□ -2.03
HMGB1P16-201ENST00000447155 IGF2RP11717 2491 aa2.34□□□□□ -2.04
HMGB1P16-201ENST00000447155 RIF1Q5UIP0 2472 aaKnown RBP2.33□□□□□ -2.04
HMGB1P16-201ENST00000447155 EPG5Q9HCE0 2579 aa2.33□□□□□ -2.04
HMGB1P16-201ENST00000447155 UBE2DNLQ8IWF7 75 aa2.33□□□□□ -2.04
HMGB1P16-201ENST00000447155 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
HMGB1P16-201ENST00000447155 PIEZO1Q92508 2521 aa2.33□□□□□ -2.04
HMGB1P16-201ENST00000447155 TEX15Q9BXT5 2789 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 A0A1B0GU33 70 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 ZFYVE26Q68DK2 2539 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 CHD8Q9HCK8 2581 aa2.32□□□□□ -2.04
HMGB1P16-201ENST00000447155 H0YAA0 97 aa2.31□□□□□ -2.04
HMGB1P16-201ENST00000447155 H1FX-AS1Q4G0G2 97 aa2.31□□□□□ -2.04
HMGB1P16-201ENST00000447155 MXRA5Q9NR99 2828 aa2.31□□□□□ -2.04
HMGB1P16-201ENST00000447155 TTC28Q96AY4 2481 aa2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 USP9YO00507 2555 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 K7EIL1 84 aa2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 SPINK1P00995 79 aa2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 SONP18583 2426 aaKnown RBP2.3□□□□□ -2.04
HMGB1P16-201ENST00000447155 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 ITPR3Q14573 2671 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 UNC79Q9P2D8 2635 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 ZNF462Q96JM2 2506 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 SPACA4Q8TDM5 124 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 MTORP42345 2549 aa2.29□□□□□ -2.04
HMGB1P16-201ENST00000447155 A0A087WTM6 91 aa2.28□□□□□ -2.04
HMGB1P16-201ENST00000447155 P0C880 135 aa2.28□□□□□ -2.04
HMGB1P16-201ENST00000447155 FLNAP21333 2647 aaKnown RBP2.28□□□□□ -2.04
HMGB1P16-201ENST00000447155 NBEAL2Q6ZNJ1 2754 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 CFAP46Q8IYW2 2715 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 ZFHX2Q9C0A1 2572 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 LAMA5O15230 3695 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 Q6ZSA8 131 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 HIVEP1P15822 2718 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 CENPEQ02224 2701 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 F8P00451 2351 aa2.27□□□□□ -2.05
HMGB1P16-201ENST00000447155 VPS13CQ709C8 3753 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 ACACBO00763 2458 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 NOTCH2Q04721 2471 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 ZANQ9Y493 2812 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 RELNP78509 3460 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 RPL37P61927 97 aaKnown RBP2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
HMGB1P16-201ENST00000447155 BAHCC1Q9P281 2608 aa2.25□□□□□ -2.05
HMGB1P16-201ENST00000447155 MYO18BQ8IUG5 2567 aa2.25□□□□□ -2.05
HMGB1P16-201ENST00000447155 SVEP1Q4LDE5 3571 aa2.25□□□□□ -2.05
HMGB1P16-201ENST00000447155 SETD2Q9BYW2 2564 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P16-201ENST00000447155 PKD1L2Q7Z442 2459 aa2.25□□□□□ -2.05
HMGB1P16-201ENST00000447155 NBPF19A0A087WUL8 3843 aa2.24□□□□□ -2.05
HMGB1P16-201ENST00000447155 NF1P21359 2839 aa2.24□□□□□ -2.05
HMGB1P16-201ENST00000447155 ABCA12Q86UK0 2595 aa2.24□□□□□ -2.05
HMGB1P16-201ENST00000447155 FAM208BQ5VWN6 2430 aa2.23□□□□□ -2.05
HMGB1P16-201ENST00000447155 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P16-201ENST00000447155 POLQO75417 2590 aa2.23□□□□□ -2.05
HMGB1P16-201ENST00000447155 MUC3AQ02505 3323 aa2.22□□□□□ -2.05
HMGB1P16-201ENST00000447155 HECTD1Q9ULT8 2610 aa2.22□□□□□ -2.05
HMGB1P16-201ENST00000447155 OTOGQ6ZRI0 2925 aa2.22□□□□□ -2.05
HMGB1P16-201ENST00000447155 CCDC168Q8NDH2 2452 aa2.22□□□□□ -2.05
HMGB1P16-201ENST00000447155 NBDYA0A0U1RRE5 68 aa2.21□□□□□ -2.06
HMGB1P16-201ENST00000447155 FLNCQ14315 2725 aa2.2□□□□□ -2.06
HMGB1P16-201ENST00000447155 FBN2P35556 2912 aa2.2□□□□□ -2.06
HMGB1P16-201ENST00000447155 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
HMGB1P16-201ENST00000447155 UBR5O95071 2799 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P16-201ENST00000447155 NIPBLQ6KC79 2804 aaeCLIP2.19□□□□□ -2.06
HMGB1P16-201ENST00000447155 CSMD2Q7Z408 3487 aa2.18□□□□□ -2.06
HMGB1P16-201ENST00000447155 DNAH1Q9P2D7 4330 aa2.17□□□□□ -2.06
HMGB1P16-201ENST00000447155 HELZ2Q9BYK8 2649 aaKnown RBP2.17□□□□□ -2.06
HMGB1P16-201ENST00000447155 ANK3Q12955 4377 aaKnown RBP2.17□□□□□ -2.06
HMGB1P16-201ENST00000447155 VWFP04275 2813 aa2.16□□□□□ -2.06
HMGB1P16-201ENST00000447155 Q6ZRN7 208 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P16-201ENST00000447155 APLNQ9ULZ1 77 aa2.16□□□□□ -2.06
HMGB1P16-201ENST00000447155 IGSF10Q6WRI0 2623 aa2.16□□□□□ -2.06
HMGB1P16-201ENST00000447155 CACNA1AO00555 2505 aa2.16□□□□□ -2.06
HMGB1P16-201ENST00000447155 TENM4Q6N022 2769 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms