RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
HMGB2-203ENST00000446922 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
HMGB2-203ENST00000446922 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
HMGB2-203ENST00000446922 J3KT08 172 aa7.87□□□□□ -1.15
HMGB2-203ENST00000446922 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
HMGB2-203ENST00000446922 BAALC-AS2P0C853 105 aa7.86□□□□□ -1.15
HMGB2-203ENST00000446922 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
HMGB2-203ENST00000446922 A0A1B0GW54 56 aa7.85□□□□□ -1.15
HMGB2-203ENST00000446922 C9JAW5 83 aa7.85□□□□□ -1.15
HMGB2-203ENST00000446922 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
HMGB2-203ENST00000446922 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
HMGB2-203ENST00000446922 VPS25Q9BRG1 176 aa7.84□□□□□ -1.15
HMGB2-203ENST00000446922 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
HMGB2-203ENST00000446922 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
HMGB2-203ENST00000446922 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
HMGB2-203ENST00000446922 Q6ZQT0 140 aa7.82□□□□□ -1.16
HMGB2-203ENST00000446922 JMJD7-PLA2G4BH0Y9G9 81 aa7.81□□□□□ -1.16
HMGB2-203ENST00000446922 HRES1P13985 223 aa7.81□□□□□ -1.16
HMGB2-203ENST00000446922 M0R143 59 aa7.79□□□□□ -1.16
HMGB2-203ENST00000446922 NDUFB1O75438 58 aa7.79□□□□□ -1.16
HMGB2-203ENST00000446922 PDE6GP18545 87 aa7.79□□□□□ -1.16
HMGB2-203ENST00000446922 ATXN8Q156A1 80 aa7.79□□□□□ -1.16
HMGB2-203ENST00000446922 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
HMGB2-203ENST00000446922 LOC110117498A0A087WWA1 95 aa7.76□□□□□ -1.17
HMGB2-203ENST00000446922 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
HMGB2-203ENST00000446922 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
HMGB2-203ENST00000446922 ZCCHC13Q8WW36 166 aaKnown RBP7.76□□□□□ -1.17
HMGB2-203ENST00000446922 A8MWP4 228 aa7.72□□□□□ -1.17
HMGB2-203ENST00000446922 LYRM7Q5U5X0 104 aa7.72□□□□□ -1.17
HMGB2-203ENST00000446922 SPINK7P58062 85 aa7.7□□□□□ -1.18
HMGB2-203ENST00000446922 MT2AP02795 61 aa7.69□□□□□ -1.18
HMGB2-203ENST00000446922 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
HMGB2-203ENST00000446922 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
HMGB2-203ENST00000446922 SMIM6P0DI80 62 aa7.66□□□□□ -1.18
HMGB2-203ENST00000446922 NAA38Q9BRA0 125 aaKnown RBP7.66□□□□□ -1.18
HMGB2-203ENST00000446922 NREPQ16612 68 aa7.65□□□□□ -1.18
HMGB2-203ENST00000446922 KRTAP9-9Q9BYP9 154 aa7.65□□□□□ -1.18
HMGB2-203ENST00000446922 KRTAP9-4Q9BYQ2 154 aa7.65□□□□□ -1.18
HMGB2-203ENST00000446922 Q6ZVQ6 151 aa7.64□□□□□ -1.19
HMGB2-203ENST00000446922 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
HMGB2-203ENST00000446922 C14orf132Q9NPU4 83 aa7.64□□□□□ -1.19
HMGB2-203ENST00000446922 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
HMGB2-203ENST00000446922 MT1FP04733 61 aa7.61□□□□□ -1.19
HMGB2-203ENST00000446922 TSTD3H0UI37 97 aa7.6□□□□□ -1.19
HMGB2-203ENST00000446922 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
HMGB2-203ENST00000446922 USH2AO75445 5202 aa7.59□□□□□ -1.19
HMGB2-203ENST00000446922 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
HMGB2-203ENST00000446922 H3BT86 120 aa7.58□□□□□ -1.2
HMGB2-203ENST00000446922 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
HMGB2-203ENST00000446922 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
HMGB2-203ENST00000446922 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
HMGB2-203ENST00000446922 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
HMGB2-203ENST00000446922 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
HMGB2-203ENST00000446922 SSPOA2VEC9 5147 aa7.54□□□□□ -1.2
HMGB2-203ENST00000446922 hDV103S1A0JD37 113 aa7.53□□□□□ -1.2
HMGB2-203ENST00000446922 BATFQ16520 125 aa7.52□□□□□ -1.21
HMGB2-203ENST00000446922 A0A1W2PPM0 123 aa7.5□□□□□ -1.21
HMGB2-203ENST00000446922 K7EQZ3 153 aa7.49□□□□□ -1.21
HMGB2-203ENST00000446922 BPY2O14599 106 aa7.48□□□□□ -1.21
HMGB2-203ENST00000446922 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
HMGB2-203ENST00000446922 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
HMGB2-203ENST00000446922 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
HMGB2-203ENST00000446922 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
HMGB2-203ENST00000446922 NDUFS5O43920 106 aa7.46□□□□□ -1.22
HMGB2-203ENST00000446922 LINC00846Q9NV44 126 aa7.45□□□□□ -1.22
HMGB2-203ENST00000446922 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
HMGB2-203ENST00000446922 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
HMGB2-203ENST00000446922 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
HMGB2-203ENST00000446922 LOC105371267A0A1B0GV96 52 aa7.38□□□□□ -1.23
HMGB2-203ENST00000446922 Q5W150 140 aa7.38□□□□□ -1.23
HMGB2-203ENST00000446922 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
HMGB2-203ENST00000446922 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
HMGB2-203ENST00000446922 CXCL6P80162 114 aa7.37□□□□□ -1.23
HMGB2-203ENST00000446922 SPCS1Q9Y6A9 102 aa7.37□□□□□ -1.23
HMGB2-203ENST00000446922 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
HMGB2-203ENST00000446922 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
HMGB2-203ENST00000446922 HCG22E2RYF7 251 aa7.34□□□□□ -1.23
HMGB2-203ENST00000446922 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
HMGB2-203ENST00000446922 Q8N9L7 120 aa7.32□□□□□ -1.24
HMGB2-203ENST00000446922 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
HMGB2-203ENST00000446922 COL5A1-AS1Q5SY13 56 aa7.29□□□□□ -1.24
HMGB2-203ENST00000446922 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
HMGB2-203ENST00000446922 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
HMGB2-203ENST00000446922 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
HMGB2-203ENST00000446922 K7EP34 96 aa7.23□□□□□ -1.25
HMGB2-203ENST00000446922 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
HMGB2-203ENST00000446922 GTF2H5Q6ZYL4 71 aa7.17□□□□□ -1.26
HMGB2-203ENST00000446922 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
HMGB2-203ENST00000446922 F8W1H4 67 aa7.16□□□□□ -1.26
HMGB2-203ENST00000446922 LCE4AQ5TA78 99 aa7.15□□□□□ -1.26
HMGB2-203ENST00000446922 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
HMGB2-203ENST00000446922 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
HMGB2-203ENST00000446922 S4R3F8 94 aa7.15□□□□□ -1.26
HMGB2-203ENST00000446922 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
HMGB2-203ENST00000446922 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
HMGB2-203ENST00000446922 SYNE2Q8WXH0 6885 aaKnown RBP7.12□□□□□ -1.27
HMGB2-203ENST00000446922 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.27
HMGB2-203ENST00000446922 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.27
HMGB2-203ENST00000446922 LCA10Q71F78 164 aa7.08□□□□□ -1.28
HMGB2-203ENST00000446922 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms