RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 IGKV2-29A2NJV5 120 aaPredicted RBP3.38□□□□□ -1.87
SSXP3-201ENST00000442971 NDUFC2-KCTD14E9PQ53 114 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 UQCRQO14949 82 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 DNAL4O96015 105 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 MT4P47944 62 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 MEIG1Q5JSS6 88 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 SMIM29Q86T20 159 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 ZNF625Q96I27 306 aaPredicted RBP3.38□□□□□ -1.87
SSXP3-201ENST00000442971 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 SPRR4Q96PI1 79 aa3.38□□□□□ -1.87
SSXP3-201ENST00000442971 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 FAM236DA0A1B0GTK5 79 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 A0A1B0GX51 115 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 ATOX1O00244 68 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 FAM236CP0DP71 79 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 S100A7L2Q5SY68 101 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
SSXP3-201ENST00000442971 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
SSXP3-201ENST00000442971 NPC2P61916 151 aa3.35□□□□□ -1.87
SSXP3-201ENST00000442971 HIST1H4AP62805 103 aaKnown RBP3.35□□□□□ -1.87
SSXP3-201ENST00000442971 RNASE13Q5GAN3 156 aaKnown RBP3.35□□□□□ -1.87
SSXP3-201ENST00000442971 C9orf153Q5TBE3 101 aa3.35□□□□□ -1.87
SSXP3-201ENST00000442971 Q6JHZ5 121 aa3.35□□□□□ -1.87
SSXP3-201ENST00000442971 COX7B2Q8TF08 81 aa3.35□□□□□ -1.87
SSXP3-201ENST00000442971 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 H3BQ85 93 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 MT1BP07438 61 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 COX7CP15954 63 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
SSXP3-201ENST00000442971 SOSTDC1Q6X4U4 206 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
SSXP3-201ENST00000442971 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 J3KT08 172 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 MOBPQ13875 183 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 ATP11AUNQ6ZP68 121 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 SMIM20Q8N5G0 67 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
SSXP3-201ENST00000442971 A8MWP4 228 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 LINC00158P58513 81 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 TMEM258P61165 79 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 ORMDL1Q9P0S3 153 aa3.32□□□□□ -1.88
SSXP3-201ENST00000442971 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
SSXP3-201ENST00000442971 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 TRBV10-3A0A0K0K1G6 114 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 NDUFC2O95298 119 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 COX17Q14061 63 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
SSXP3-201ENST00000442971 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
SSXP3-201ENST00000442971 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
SSXP3-201ENST00000442971 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 hADV29S1A0JD25 119 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 TMEM256-PLSCR3K7ERE1 68 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 CCKP06307 115 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 PDE6GP18545 87 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 Q8IZM0 81 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 OR13C6PQ8NH95 151 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
SSXP3-201ENST00000442971 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
SSXP3-201ENST00000442971 C6orf226Q5I0X4 101 aa3.28□□□□□ -1.88
SSXP3-201ENST00000442971 Q5VV11 94 aa3.28□□□□□ -1.88
SSXP3-201ENST00000442971 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
SSXP3-201ENST00000442971 C14orf132Q9NPU4 83 aa3.28□□□□□ -1.88
SSXP3-201ENST00000442971 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
SSXP3-201ENST00000442971 LOC110117498A0A087WWA1 95 aa3.26□□□□□ -1.89
SSXP3-201ENST00000442971 LIMD2Q9BT23 127 aa3.26□□□□□ -1.89
SSXP3-201ENST00000442971 NCR3O14931 201 aa3.25□□□□□ -1.89
SSXP3-201ENST00000442971 PFN2P35080 140 aa3.25□□□□□ -1.89
SSXP3-201ENST00000442971 IGKV3D-7A0A0C4DH55 119 aa3.24□□□□□ -1.89
SSXP3-201ENST00000442971 NDUFC1O43677 76 aa3.24□□□□□ -1.89
SSXP3-201ENST00000442971 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
SSXP3-201ENST00000442971 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
SSXP3-201ENST00000442971 CXCL6P80162 114 aa3.24□□□□□ -1.89
SSXP3-201ENST00000442971 KIAA0087Q14695 138 aa3.24□□□□□ -1.89
SSXP3-201ENST00000442971 TRAV7A0A075B6U4 112 aa3.23□□□□□ -1.89
SSXP3-201ENST00000442971 TRBV7-6A0A0J9YX20 115 aa3.23□□□□□ -1.89
SSXP3-201ENST00000442971 RBM3P98179 157 aaKnown RBP3.23□□□□□ -1.89
SSXP3-201ENST00000442971 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
SSXP3-201ENST00000442971 LINC00575Q6W349 94 aa3.23□□□□□ -1.89
SSXP3-201ENST00000442971 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
SSXP3-201ENST00000442971 MT3P25713 68 aa3.22□□□□□ -1.89
SSXP3-201ENST00000442971 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.22□□□□□ -1.89
SSXP3-201ENST00000442971 Q6ZQT0 140 aa3.22□□□□□ -1.89
SSXP3-201ENST00000442971 Q8NDZ9 215 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms