RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 FCGBPQ9Y6R7 5405 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-219ENST00000440240 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
CPNE1-219ENST00000440240 K7ERJ3 54 aa10.24□□□□□ -0.77
CPNE1-219ENST00000440240 LCE2BO14633 110 aa10.23□□□□□ -0.77
CPNE1-219ENST00000440240 VPS25Q9BRG1 176 aa10.23□□□□□ -0.77
CPNE1-219ENST00000440240 KRTAP9-3Q9BYQ3 159 aa10.23□□□□□ -0.77
CPNE1-219ENST00000440240 RBM3P98179 157 aaKnown RBP10.22□□□□□ -0.77
CPNE1-219ENST00000440240 DSCR8Q96T75 97 aa10.21□□□□□ -0.77
CPNE1-219ENST00000440240 J3KT08 172 aa10.19□□□□□ -0.78
CPNE1-219ENST00000440240 C21orf62-AS1Q17RA5 79 aa10.19□□□□□ -0.78
CPNE1-219ENST00000440240 ZCCHC13Q8WW36 166 aaKnown RBP10.19□□□□□ -0.78
CPNE1-219ENST00000440240 KRTAP19-1Q8IUB9 90 aa10.18□□□□□ -0.78
CPNE1-219ENST00000440240 SCGB1C2P0DMR2 95 aa10.16□□□□□ -0.78
CPNE1-219ENST00000440240 SPINK7P58062 85 aa10.16□□□□□ -0.78
CPNE1-219ENST00000440240 PYY3Q5JQD4 70 aa10.14□□□□□ -0.79
CPNE1-219ENST00000440240 C9JAW5 83 aa10.13□□□□□ -0.79
CPNE1-219ENST00000440240 NDUFB1O75438 58 aa10.12□□□□□ -0.79
CPNE1-219ENST00000440240 Q6ZQT0 140 aa10.1□□□□□ -0.79
CPNE1-219ENST00000440240 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-219ENST00000440240 BAALC-AS2P0C853 105 aa10.09□□□□□ -0.79
CPNE1-219ENST00000440240 UQCR10Q9UDW1 63 aa10.09□□□□□ -0.79
CPNE1-219ENST00000440240 LINC00846Q9NV44 126 aa10.06□□□□□ -0.8
CPNE1-219ENST00000440240 LYRM7Q5U5X0 104 aa10.04□□□□□ -0.8
CPNE1-219ENST00000440240 A0A1B0GW54 56 aa10.02□□□□□ -0.81
CPNE1-219ENST00000440240 A8MWP4 228 aa10.01□□□□□ -0.81
CPNE1-219ENST00000440240 WFDC13Q8IUB5 93 aa10.01□□□□□ -0.81
CPNE1-219ENST00000440240 C8orf17Q9NRJ1 99 aa10.01□□□□□ -0.81
CPNE1-219ENST00000440240 MACF1Q9UPN3 7388 aaKnown RBP10□□□□□ -0.81
CPNE1-219ENST00000440240 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
CPNE1-219ENST00000440240 SYNE2Q8WXH0 6885 aaKnown RBP9.96□□□□□ -0.81
CPNE1-219ENST00000440240 PDE6GP18545 87 aa9.96□□□□□ -0.82
CPNE1-219ENST00000440240 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
CPNE1-219ENST00000440240 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
CPNE1-219ENST00000440240 KRTAP19-6Q3LI70 58 aa9.94□□□□□ -0.82
CPNE1-219ENST00000440240 Q6ZVQ6 151 aa9.94□□□□□ -0.82
CPNE1-219ENST00000440240 ATXN8Q156A1 80 aa9.93□□□□□ -0.82
CPNE1-219ENST00000440240 PRR15Q8IV56 129 aa9.9□□□□□ -0.82
CPNE1-219ENST00000440240 NREPQ16612 68 aa9.86□□□□□ -0.83
CPNE1-219ENST00000440240 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
CPNE1-219ENST00000440240 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
CPNE1-219ENST00000440240 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
CPNE1-219ENST00000440240 C14orf132Q9NPU4 83 aa9.84□□□□□ -0.83
CPNE1-219ENST00000440240 M0R143 59 aa9.83□□□□□ -0.84
CPNE1-219ENST00000440240 NAA38Q9BRA0 125 aaKnown RBP9.82□□□□□ -0.84
CPNE1-219ENST00000440240 MMP24-AS1A0A0U1RRL7 71 aa9.8□□□□□ -0.84
CPNE1-219ENST00000440240 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
CPNE1-219ENST00000440240 hDV103S1A0JD37 113 aa9.77□□□□□ -0.85
CPNE1-219ENST00000440240 NDUFS5O43920 106 aa9.76□□□□□ -0.85
CPNE1-219ENST00000440240 K7EQZ3 153 aa9.71□□□□□ -0.86
CPNE1-219ENST00000440240 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
CPNE1-219ENST00000440240 IGKV2-30P06310 120 aa9.69□□□□□ -0.86
CPNE1-219ENST00000440240 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
CPNE1-219ENST00000440240 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
CPNE1-219ENST00000440240 BPY2O14599 106 aa9.64□□□□□ -0.87
CPNE1-219ENST00000440240 Q5W150 140 aa9.64□□□□□ -0.87
CPNE1-219ENST00000440240 H3BT86 120 aa9.6□□□□□ -0.87
CPNE1-219ENST00000440240 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
CPNE1-219ENST00000440240 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
CPNE1-219ENST00000440240 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
CPNE1-219ENST00000440240 BATFQ16520 125 aa9.54□□□□□ -0.88
CPNE1-219ENST00000440240 TSTD3H0UI37 97 aa9.52□□□□□ -0.89
CPNE1-219ENST00000440240 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
CPNE1-219ENST00000440240 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
CPNE1-219ENST00000440240 CXCL6P80162 114 aa9.51□□□□□ -0.89
CPNE1-219ENST00000440240 Q8N9L7 120 aa9.51□□□□□ -0.89
CPNE1-219ENST00000440240 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
CPNE1-219ENST00000440240 A0A1W2PPM0 123 aa9.47□□□□□ -0.89
CPNE1-219ENST00000440240 FAM236AA0A1B0GUQ0 79 aa9.46□□□□□ -0.9
CPNE1-219ENST00000440240 FAM236BA0A1B0GV22 79 aa9.46□□□□□ -0.9
CPNE1-219ENST00000440240 TAX1BP3O14907 124 aa9.42□□□□□ -0.9
CPNE1-219ENST00000440240 A6NN06 94 aa9.41□□□□□ -0.9
CPNE1-219ENST00000440240 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
CPNE1-219ENST00000440240 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
CPNE1-219ENST00000440240 S4R3F8 94 aa9.39□□□□□ -0.91
CPNE1-219ENST00000440240 Q5VV11 94 aa9.38□□□□□ -0.91
CPNE1-219ENST00000440240 NEBP20929 6669 aa9.36□□□□□ -0.91
CPNE1-219ENST00000440240 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
CPNE1-219ENST00000440240 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
CPNE1-219ENST00000440240 MT1BP07438 61 aa9.35□□□□□ -0.91
CPNE1-219ENST00000440240 SPRR2GQ9BYE4 73 aa9.35□□□□□ -0.91
CPNE1-219ENST00000440240 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
CPNE1-219ENST00000440240 LCA10Q71F78 164 aa9.32□□□□□ -0.92
CPNE1-219ENST00000440240 SPCS1Q9Y6A9 102 aa9.31□□□□□ -0.92
CPNE1-219ENST00000440240 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-219ENST00000440240 MUC12Q9UKN1 5478 aa9.29□□□□□ -0.92
CPNE1-219ENST00000440240 TP53AIP1Q9HCN2 124 aa9.27□□□□□ -0.93
CPNE1-219ENST00000440240 KRTAP10-5P60370 271 aa9.23□□□□□ -0.93
CPNE1-219ENST00000440240 KLKP1Q107X0 134 aa9.23□□□□□ -0.93
CPNE1-219ENST00000440240 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
CPNE1-219ENST00000440240 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
CPNE1-219ENST00000440240 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
CPNE1-219ENST00000440240 CYP4F30PQ9H0H9 118 aa9.11□□□□□ -0.95
CPNE1-219ENST00000440240 COL5A1-AS1Q5SY13 56 aa9.09□□□□□ -0.95
CPNE1-219ENST00000440240 K7EP34 96 aa9.08□□□□□ -0.96
CPNE1-219ENST00000440240 KRTAP5-9P26371 169 aa9.08□□□□□ -0.96
CPNE1-219ENST00000440240 LOC105371267A0A1B0GV96 52 aa9.07□□□□□ -0.96
CPNE1-219ENST00000440240 IMUPQ9GZP8 106 aa9.07□□□□□ -0.96
CPNE1-219ENST00000440240 KRTAP20-1Q3LI63 56 aa9.06□□□□□ -0.96
CPNE1-219ENST00000440240 KMT2DO14686 5537 aa9.05□□□□□ -0.96
CPNE1-219ENST00000440240 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms