RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 DSCR10P59022 87 aa8.41□□□□□ -1.06
CNOT9-205ENST00000433439 LPAP08519 4548 aa8.4□□□□□ -1.06
CNOT9-205ENST00000433439 NDUFB1O75438 58 aa8.4□□□□□ -1.06
CNOT9-205ENST00000433439 BPY2O14599 106 aa8.39□□□□□ -1.07
CNOT9-205ENST00000433439 XP32Q5T750 250 aa8.39□□□□□ -1.07
CNOT9-205ENST00000433439 A0A1B0GVX0 72 aa8.38□□□□□ -1.07
CNOT9-205ENST00000433439 A8MWP4 228 aa8.37□□□□□ -1.07
CNOT9-205ENST00000433439 LINC00313P59037 77 aa8.37□□□□□ -1.07
CNOT9-205ENST00000433439 ACYP1P07311 99 aa8.36□□□□□ -1.07
CNOT9-205ENST00000433439 IGKV3D-7A0A0C4DH55 119 aa8.35□□□□□ -1.07
CNOT9-205ENST00000433439 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
CNOT9-205ENST00000433439 FAM240AA0A1B0GVK7 77 aa8.33□□□□□ -1.08
CNOT9-205ENST00000433439 C8orf87E5RJ46 101 aa8.32□□□□□ -1.08
CNOT9-205ENST00000433439 J3QR89 54 aa8.32□□□□□ -1.08
CNOT9-205ENST00000433439 K7EQZ3 153 aa8.32□□□□□ -1.08
CNOT9-205ENST00000433439 Q8N9L7 120 aa8.32□□□□□ -1.08
CNOT9-205ENST00000433439 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
CNOT9-205ENST00000433439 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
CNOT9-205ENST00000433439 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.09
CNOT9-205ENST00000433439 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
CNOT9-205ENST00000433439 KRTAP16-1A8MUX0 517 aa8.26□□□□□ -1.09
CNOT9-205ENST00000433439 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
CNOT9-205ENST00000433439 FAT4Q6V0I7 4981 aa8.24□□□□□ -1.09
CNOT9-205ENST00000433439 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
CNOT9-205ENST00000433439 CXCL6P80162 114 aa8.23□□□□□ -1.09
CNOT9-205ENST00000433439 Q75L30 129 aa8.23□□□□□ -1.09
CNOT9-205ENST00000433439 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
CNOT9-205ENST00000433439 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
CNOT9-205ENST00000433439 A8MUU9 505 aa8.21□□□□□ -1.1
CNOT9-205ENST00000433439 hDV103S1A0JD37 113 aa8.2□□□□□ -1.1
CNOT9-205ENST00000433439 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
CNOT9-205ENST00000433439 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
CNOT9-205ENST00000433439 K7ERU9 68 aa8.19□□□□□ -1.1
CNOT9-205ENST00000433439 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
CNOT9-205ENST00000433439 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
CNOT9-205ENST00000433439 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
CNOT9-205ENST00000433439 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
CNOT9-205ENST00000433439 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
CNOT9-205ENST00000433439 HCG22E2RYF7 251 aa8.16□□□□□ -1.1
CNOT9-205ENST00000433439 NDUFS5O43920 106 aa8.16□□□□□ -1.1
CNOT9-205ENST00000433439 Q8N9P0 234 aaPredicted RBP8.14□□□□□ -1.11
CNOT9-205ENST00000433439 MUC2Q02817 5179 aa8.13□□□□□ -1.11
CNOT9-205ENST00000433439 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
CNOT9-205ENST00000433439 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
CNOT9-205ENST00000433439 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
CNOT9-205ENST00000433439 A0A087WVE0 104 aa8.08□□□□□ -1.12
CNOT9-205ENST00000433439 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
CNOT9-205ENST00000433439 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
CNOT9-205ENST00000433439 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CNOT9-205ENST00000433439 MT-ATP8P03928 68 aa8.01□□□□□ -1.13
CNOT9-205ENST00000433439 Q5W150 140 aa7.98□□□□□ -1.13
CNOT9-205ENST00000433439 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
CNOT9-205ENST00000433439 SPINK7P58062 85 aa7.94□□□□□ -1.14
CNOT9-205ENST00000433439 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
CNOT9-205ENST00000433439 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
CNOT9-205ENST00000433439 IGKV2D-30A0A075B6S6 120 aa7.91□□□□□ -1.14
CNOT9-205ENST00000433439 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
CNOT9-205ENST00000433439 SCGB1A1P11684 91 aa7.9□□□□□ -1.14
CNOT9-205ENST00000433439 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
CNOT9-205ENST00000433439 COX6B2Q6YFQ2 88 aa7.87□□□□□ -1.15
CNOT9-205ENST00000433439 UQCRQO14949 82 aa7.86□□□□□ -1.15
CNOT9-205ENST00000433439 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
CNOT9-205ENST00000433439 HRES1P13985 223 aa7.85□□□□□ -1.15
CNOT9-205ENST00000433439 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
CNOT9-205ENST00000433439 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
CNOT9-205ENST00000433439 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
CNOT9-205ENST00000433439 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
CNOT9-205ENST00000433439 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
CNOT9-205ENST00000433439 H0Y9P7 68 aa7.82□□□□□ -1.16
CNOT9-205ENST00000433439 OCR1Q9BZK8 76 aa7.82□□□□□ -1.16
CNOT9-205ENST00000433439 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
CNOT9-205ENST00000433439 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
CNOT9-205ENST00000433439 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
CNOT9-205ENST00000433439 ATOX1O00244 68 aa7.76□□□□□ -1.17
CNOT9-205ENST00000433439 MP68P56378 58 aa7.75□□□□□ -1.17
CNOT9-205ENST00000433439 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
CNOT9-205ENST00000433439 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
CNOT9-205ENST00000433439 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
CNOT9-205ENST00000433439 C5orf47Q569G3 176 aa7.73□□□□□ -1.17
CNOT9-205ENST00000433439 C1orf64Q8NEQ6 169 aa7.73□□□□□ -1.17
CNOT9-205ENST00000433439 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
CNOT9-205ENST00000433439 C4orf26Q17RF5 130 aa7.72□□□□□ -1.17
CNOT9-205ENST00000433439 SMIM20Q8N5G0 67 aa7.71□□□□□ -1.18
CNOT9-205ENST00000433439 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
CNOT9-205ENST00000433439 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
CNOT9-205ENST00000433439 MT1HP80294 61 aa7.67□□□□□ -1.18
CNOT9-205ENST00000433439 M0R2T5 61 aa7.65□□□□□ -1.18
CNOT9-205ENST00000433439 H3BPC8 53 aa7.64□□□□□ -1.19
CNOT9-205ENST00000433439 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
CNOT9-205ENST00000433439 SERP2Q8N6R1 65 aa7.6□□□□□ -1.19
CNOT9-205ENST00000433439 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
CNOT9-205ENST00000433439 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
CNOT9-205ENST00000433439 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
CNOT9-205ENST00000433439 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
CNOT9-205ENST00000433439 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
CNOT9-205ENST00000433439 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
CNOT9-205ENST00000433439 COX7CP15954 63 aa7.49□□□□□ -1.21
CNOT9-205ENST00000433439 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
CNOT9-205ENST00000433439 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
CNOT9-205ENST00000433439 S4R3F8 94 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms