RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
MSH5-208ENST00000429846 LCE2BO14633 110 aa7.35□□□□□ -1.23
MSH5-208ENST00000429846 HSD52Q0P140 79 aa7.35□□□□□ -1.23
MSH5-208ENST00000429846 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
MSH5-208ENST00000429846 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.23
MSH5-208ENST00000429846 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
MSH5-208ENST00000429846 K7ERJ3 54 aa7.32□□□□□ -1.24
MSH5-208ENST00000429846 C21orf62-AS1Q17RA5 79 aa7.32□□□□□ -1.24
MSH5-208ENST00000429846 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
MSH5-208ENST00000429846 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
MSH5-208ENST00000429846 J3KT08 172 aa7.3□□□□□ -1.24
MSH5-208ENST00000429846 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
MSH5-208ENST00000429846 VPS25Q9BRG1 176 aa7.3□□□□□ -1.24
MSH5-208ENST00000429846 DSCR8Q96T75 97 aa7.29□□□□□ -1.24
MSH5-208ENST00000429846 SPINK7P58062 85 aa7.27□□□□□ -1.25
MSH5-208ENST00000429846 NDUFB1O75438 58 aa7.24□□□□□ -1.25
MSH5-208ENST00000429846 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
MSH5-208ENST00000429846 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
MSH5-208ENST00000429846 C9JAW5 83 aa7.23□□□□□ -1.25
MSH5-208ENST00000429846 SCGB1C2P0DMR2 95 aa7.23□□□□□ -1.25
MSH5-208ENST00000429846 PYY3Q5JQD4 70 aa7.23□□□□□ -1.25
MSH5-208ENST00000429846 A8MWP4 228 aa7.22□□□□□ -1.25
MSH5-208ENST00000429846 Q6ZQT0 140 aa7.22□□□□□ -1.25
MSH5-208ENST00000429846 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.26
MSH5-208ENST00000429846 A0A1B0GW54 56 aa7.19□□□□□ -1.26
MSH5-208ENST00000429846 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
MSH5-208ENST00000429846 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
MSH5-208ENST00000429846 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
MSH5-208ENST00000429846 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
MSH5-208ENST00000429846 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
MSH5-208ENST00000429846 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
MSH5-208ENST00000429846 MACF1Q9UPN3 7388 aaKnown RBP7.16□□□□□ -1.26
MSH5-208ENST00000429846 JMJD7-PLA2G4BH0Y9G9 81 aa7.15□□□□□ -1.26
MSH5-208ENST00000429846 SYNE2Q8WXH0 6885 aaKnown RBP7.15□□□□□ -1.27
MSH5-208ENST00000429846 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
MSH5-208ENST00000429846 TMA7Q9Y2S6 64 aaKnown RBP7.13□□□□□ -1.27
MSH5-208ENST00000429846 IGKV3D-7A0A0C4DH55 119 aa7.12□□□□□ -1.27
MSH5-208ENST00000429846 PDE6GP18545 87 aa7.12□□□□□ -1.27
MSH5-208ENST00000429846 Q6ZVQ6 151 aa7.12□□□□□ -1.27
MSH5-208ENST00000429846 ATXN8Q156A1 80 aa7.1□□□□□ -1.27
MSH5-208ENST00000429846 PRR15Q8IV56 129 aa7.08□□□□□ -1.28
MSH5-208ENST00000429846 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
MSH5-208ENST00000429846 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
MSH5-208ENST00000429846 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
MSH5-208ENST00000429846 C14orf132Q9NPU4 83 aa7.05□□□□□ -1.28
MSH5-208ENST00000429846 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
MSH5-208ENST00000429846 M0R143 59 aa7.04□□□□□ -1.28
MSH5-208ENST00000429846 NREPQ16612 68 aa7.04□□□□□ -1.28
MSH5-208ENST00000429846 hDV103S1A0JD37 113 aa7□□□□□ -1.29
MSH5-208ENST00000429846 NAA38Q9BRA0 125 aaKnown RBP7□□□□□ -1.29
MSH5-208ENST00000429846 NDUFS5O43920 106 aa6.98□□□□□ -1.29
MSH5-208ENST00000429846 K7EQZ3 153 aa6.97□□□□□ -1.29
MSH5-208ENST00000429846 C7orf65Q6ZTY9 151 aa6.96□□□□□ -1.3
MSH5-208ENST00000429846 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
MSH5-208ENST00000429846 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
MSH5-208ENST00000429846 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
MSH5-208ENST00000429846 BPY2O14599 106 aa6.9□□□□□ -1.3
MSH5-208ENST00000429846 H3BT86 120 aa6.89□□□□□ -1.31
MSH5-208ENST00000429846 Q5W150 140 aa6.88□□□□□ -1.31
MSH5-208ENST00000429846 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
MSH5-208ENST00000429846 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
MSH5-208ENST00000429846 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
MSH5-208ENST00000429846 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
MSH5-208ENST00000429846 CXCL6P80162 114 aa6.82□□□□□ -1.32
MSH5-208ENST00000429846 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
MSH5-208ENST00000429846 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
MSH5-208ENST00000429846 TSTD3H0UI37 97 aa6.79□□□□□ -1.32
MSH5-208ENST00000429846 BATFQ16520 125 aa6.79□□□□□ -1.32
MSH5-208ENST00000429846 Q8N9L7 120 aa6.79□□□□□ -1.32
MSH5-208ENST00000429846 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
MSH5-208ENST00000429846 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
MSH5-208ENST00000429846 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.33
MSH5-208ENST00000429846 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
MSH5-208ENST00000429846 A6NN06 94 aa6.76□□□□□ -1.33
MSH5-208ENST00000429846 S4R3F8 94 aa6.75□□□□□ -1.33
MSH5-208ENST00000429846 Q5VV11 94 aa6.74□□□□□ -1.33
MSH5-208ENST00000429846 MT1BP07438 61 aa6.73□□□□□ -1.33
MSH5-208ENST00000429846 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
MSH5-208ENST00000429846 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
MSH5-208ENST00000429846 TAX1BP3O14907 124 aa6.71□□□□□ -1.34
MSH5-208ENST00000429846 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
MSH5-208ENST00000429846 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
MSH5-208ENST00000429846 NEBP20929 6669 aa6.71□□□□□ -1.34
MSH5-208ENST00000429846 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
MSH5-208ENST00000429846 UBL5Q9BZL1 73 aa6.69□□□□□ -1.34
MSH5-208ENST00000429846 LCA10Q71F78 164 aa6.68□□□□□ -1.34
MSH5-208ENST00000429846 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
MSH5-208ENST00000429846 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
MSH5-208ENST00000429846 KLKP1Q107X0 134 aa6.64□□□□□ -1.35
MSH5-208ENST00000429846 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
MSH5-208ENST00000429846 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
MSH5-208ENST00000429846 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
MSH5-208ENST00000429846 KRTAP5-9P26371 169 aa6.57□□□□□ -1.36
MSH5-208ENST00000429846 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
MSH5-208ENST00000429846 PRO0461Q9UI25 63 aa6.55□□□□□ -1.36
MSH5-208ENST00000429846 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
MSH5-208ENST00000429846 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
MSH5-208ENST00000429846 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
MSH5-208ENST00000429846 K7EP34 96 aa6.49□□□□□ -1.37
MSH5-208ENST00000429846 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms