RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
SGCE-204ENST00000428696 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
SGCE-204ENST00000428696 LOC110117498A0A087WWA1 95 aa8.01□□□□□ -1.13
SGCE-204ENST00000428696 IGKV4-1P06312 121 aa8□□□□□ -1.13
SGCE-204ENST00000428696 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
SGCE-204ENST00000428696 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
SGCE-204ENST00000428696 Q96NJ1 140 aa7.96□□□□□ -1.13
SGCE-204ENST00000428696 C21orf62-AS1Q17RA5 79 aa7.95□□□□□ -1.14
SGCE-204ENST00000428696 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
SGCE-204ENST00000428696 RNF213Q63HN8 5207 aa7.94□□□□□ -1.14
SGCE-204ENST00000428696 PRO0461Q9UI25 63 aa7.94□□□□□ -1.14
SGCE-204ENST00000428696 KRTAP4-2Q9BYR5 136 aa7.93□□□□□ -1.14
SGCE-204ENST00000428696 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
SGCE-204ENST00000428696 H3BS24 57 aa7.92□□□□□ -1.14
SGCE-204ENST00000428696 NREPQ16612 68 aa7.92□□□□□ -1.14
SGCE-204ENST00000428696 DSCR10P59022 87 aa7.91□□□□□ -1.14
SGCE-204ENST00000428696 IGHV6-1A0A0B4J1U7 121 aa7.9□□□□□ -1.14
SGCE-204ENST00000428696 A0A1B0GW54 56 aa7.9□□□□□ -1.14
SGCE-204ENST00000428696 F8W1H4 67 aa7.9□□□□□ -1.14
SGCE-204ENST00000428696 LINC00313P59037 77 aa7.88□□□□□ -1.15
SGCE-204ENST00000428696 J3KT08 172 aa7.87□□□□□ -1.15
SGCE-204ENST00000428696 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
SGCE-204ENST00000428696 NDUFB1O75438 58 aa7.86□□□□□ -1.15
SGCE-204ENST00000428696 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
SGCE-204ENST00000428696 MUC2Q02817 5179 aa7.85□□□□□ -1.15
SGCE-204ENST00000428696 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
SGCE-204ENST00000428696 A0A1B0GV90 55 aa7.83□□□□□ -1.16
SGCE-204ENST00000428696 A0A1B0GVX0 72 aa7.83□□□□□ -1.16
SGCE-204ENST00000428696 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
SGCE-204ENST00000428696 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
SGCE-204ENST00000428696 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
SGCE-204ENST00000428696 A8MWP4 228 aa7.78□□□□□ -1.16
SGCE-204ENST00000428696 BPY2O14599 106 aa7.78□□□□□ -1.16
SGCE-204ENST00000428696 Q6ZVQ6 151 aa7.78□□□□□ -1.16
SGCE-204ENST00000428696 Q75L30 129 aa7.78□□□□□ -1.16
SGCE-204ENST00000428696 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
SGCE-204ENST00000428696 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
SGCE-204ENST00000428696 KRTAP4-1Q9BYQ7 146 aa7.77□□□□□ -1.17
SGCE-204ENST00000428696 UBL5Q9BZL1 73 aa7.77□□□□□ -1.17
SGCE-204ENST00000428696 LINC00846Q9NV44 126 aa7.77□□□□□ -1.17
SGCE-204ENST00000428696 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
SGCE-204ENST00000428696 A0A0U1RQV1 116 aa7.74□□□□□ -1.17
SGCE-204ENST00000428696 A8MUU9 505 aa7.74□□□□□ -1.17
SGCE-204ENST00000428696 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
SGCE-204ENST00000428696 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
SGCE-204ENST00000428696 KRTAP16-1A8MUX0 517 aa7.72□□□□□ -1.17
SGCE-204ENST00000428696 K7EQZ3 153 aa7.71□□□□□ -1.17
SGCE-204ENST00000428696 Q8N9L7 120 aa7.71□□□□□ -1.17
SGCE-204ENST00000428696 NDUFS5O43920 106 aa7.65□□□□□ -1.18
SGCE-204ENST00000428696 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
SGCE-204ENST00000428696 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
SGCE-204ENST00000428696 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
SGCE-204ENST00000428696 WFDC13Q8IUB5 93 aa7.63□□□□□ -1.19
SGCE-204ENST00000428696 ACYP1P07311 99 aa7.62□□□□□ -1.19
SGCE-204ENST00000428696 MRPL34Q9BQ48 92 aaKnown RBP7.61□□□□□ -1.19
SGCE-204ENST00000428696 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
SGCE-204ENST00000428696 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
SGCE-204ENST00000428696 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
SGCE-204ENST00000428696 ZCCHC13Q8WW36 166 aaKnown RBP7.59□□□□□ -1.19
SGCE-204ENST00000428696 COX6B2Q6YFQ2 88 aa7.58□□□□□ -1.2
SGCE-204ENST00000428696 CXCL6P80162 114 aa7.57□□□□□ -1.2
SGCE-204ENST00000428696 FAM240AA0A1B0GVK7 77 aa7.56□□□□□ -1.2
SGCE-204ENST00000428696 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
SGCE-204ENST00000428696 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
SGCE-204ENST00000428696 J3QR89 54 aa7.52□□□□□ -1.2
SGCE-204ENST00000428696 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
SGCE-204ENST00000428696 SPINK7P58062 85 aa7.49□□□□□ -1.21
SGCE-204ENST00000428696 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
SGCE-204ENST00000428696 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
SGCE-204ENST00000428696 FAM236DA0A1B0GTK5 79 aa7.46□□□□□ -1.21
SGCE-204ENST00000428696 FAM236CP0DP71 79 aa7.46□□□□□ -1.21
SGCE-204ENST00000428696 KRTAP19-2Q3LHN2 52 aa7.46□□□□□ -1.21
SGCE-204ENST00000428696 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
SGCE-204ENST00000428696 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
SGCE-204ENST00000428696 Q5W150 140 aa7.44□□□□□ -1.22
SGCE-204ENST00000428696 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
SGCE-204ENST00000428696 M0R2T5 61 aa7.43□□□□□ -1.22
SGCE-204ENST00000428696 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
SGCE-204ENST00000428696 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
SGCE-204ENST00000428696 HRES1P13985 223 aa7.4□□□□□ -1.22
SGCE-204ENST00000428696 A0A087WVE0 104 aa7.38□□□□□ -1.23
SGCE-204ENST00000428696 MT1HP80294 61 aa7.38□□□□□ -1.23
SGCE-204ENST00000428696 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
SGCE-204ENST00000428696 K7ERU9 68 aa7.36□□□□□ -1.23
SGCE-204ENST00000428696 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
SGCE-204ENST00000428696 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
SGCE-204ENST00000428696 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
SGCE-204ENST00000428696 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
SGCE-204ENST00000428696 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
SGCE-204ENST00000428696 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
SGCE-204ENST00000428696 UQCRQO14949 82 aa7.25□□□□□ -1.25
SGCE-204ENST00000428696 LCE5AQ5TCM9 118 aa7.25□□□□□ -1.25
SGCE-204ENST00000428696 FLGP20930 4061 aaPredicted RBP7.24□□□□□ -1.25
SGCE-204ENST00000428696 MT-ATP8P03928 68 aa7.23□□□□□ -1.25
SGCE-204ENST00000428696 H0Y9P7 68 aa7.22□□□□□ -1.25
SGCE-204ENST00000428696 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
SGCE-204ENST00000428696 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
SGCE-204ENST00000428696 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
SGCE-204ENST00000428696 CYP4F30PQ9H0H9 118 aa7.18□□□□□ -1.26
SGCE-204ENST00000428696 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 366.7 ms