RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TMEM256-PLSCR3K7ERE1 68 aa4.81□□□□□ -1.64
NUP50-206ENST00000422489 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
NUP50-206ENST00000422489 LINC00313P59037 77 aa4.81□□□□□ -1.64
NUP50-206ENST00000422489 DEFB116Q30KQ4 102 aa4.81□□□□□ -1.64
NUP50-206ENST00000422489 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
NUP50-206ENST00000422489 UQCR10Q9UDW1 63 aa4.8□□□□□ -1.64
NUP50-206ENST00000422489 TRBV20-1A0A075B6N2 111 aa4.79□□□□□ -1.64
NUP50-206ENST00000422489 TRBV7-4A0A0J9YYF1 115 aa4.79□□□□□ -1.64
NUP50-206ENST00000422489 CCKP06307 115 aa4.79□□□□□ -1.64
NUP50-206ENST00000422489 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
NUP50-206ENST00000422489 VPS25Q9BRG1 176 aa4.79□□□□□ -1.64
NUP50-206ENST00000422489 TRACP01848 142 aa4.78□□□□□ -1.64
NUP50-206ENST00000422489 IGHV6-1A0A0B4J1U7 121 aa4.76□□□□□ -1.65
NUP50-206ENST00000422489 UBE2V1Q13404 147 aa4.76□□□□□ -1.65
NUP50-206ENST00000422489 RBM3P98179 157 aaKnown RBP4.75□□□□□ -1.65
NUP50-206ENST00000422489 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
NUP50-206ENST00000422489 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
NUP50-206ENST00000422489 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
NUP50-206ENST00000422489 BAALC-AS2P0C853 105 aa4.74□□□□□ -1.65
NUP50-206ENST00000422489 DSCR8Q96T75 97 aa4.74□□□□□ -1.65
NUP50-206ENST00000422489 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
NUP50-206ENST00000422489 KRTAP16-1A8MUX0 517 aa4.73□□□□□ -1.65
NUP50-206ENST00000422489 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
NUP50-206ENST00000422489 C9JAW5 83 aa4.71□□□□□ -1.66
NUP50-206ENST00000422489 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
NUP50-206ENST00000422489 A0A1B0GVX0 72 aa4.7□□□□□ -1.66
NUP50-206ENST00000422489 NAA38Q9BRA0 125 aaKnown RBP4.7□□□□□ -1.66
NUP50-206ENST00000422489 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
NUP50-206ENST00000422489 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
NUP50-206ENST00000422489 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
NUP50-206ENST00000422489 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
NUP50-206ENST00000422489 J3KT08 172 aa4.67□□□□□ -1.66
NUP50-206ENST00000422489 M0R143 59 aa4.66□□□□□ -1.66
NUP50-206ENST00000422489 NDUFB1O75438 58 aa4.66□□□□□ -1.66
NUP50-206ENST00000422489 HRES1P13985 223 aa4.66□□□□□ -1.66
NUP50-206ENST00000422489 Q6ZQT0 140 aa4.66□□□□□ -1.66
NUP50-206ENST00000422489 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
NUP50-206ENST00000422489 JMJD7-PLA2G4BH0Y9G9 81 aa4.65□□□□□ -1.67
NUP50-206ENST00000422489 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
NUP50-206ENST00000422489 PCP4L1A6NKN8 68 aa4.64□□□□□ -1.67
NUP50-206ENST00000422489 ZCCHC13Q8WW36 166 aaKnown RBP4.64□□□□□ -1.67
NUP50-206ENST00000422489 MTURNQ8N3F0 131 aa4.63□□□□□ -1.67
NUP50-206ENST00000422489 SPINK7P58062 85 aa4.62□□□□□ -1.67
NUP50-206ENST00000422489 BATFQ16520 125 aa4.62□□□□□ -1.67
NUP50-206ENST00000422489 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
NUP50-206ENST00000422489 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
NUP50-206ENST00000422489 NREPQ16612 68 aa4.61□□□□□ -1.67
NUP50-206ENST00000422489 C14orf132Q9NPU4 83 aa4.61□□□□□ -1.67
NUP50-206ENST00000422489 C8orf17Q9NRJ1 99 aa4.61□□□□□ -1.67
NUP50-206ENST00000422489 IGKV3D-7A0A0C4DH55 119 aa4.6□□□□□ -1.67
NUP50-206ENST00000422489 A8MWP4 228 aa4.6□□□□□ -1.67
NUP50-206ENST00000422489 MT2AP02795 61 aa4.6□□□□□ -1.67
NUP50-206ENST00000422489 PDE6GP18545 87 aa4.6□□□□□ -1.67
NUP50-206ENST00000422489 A0A1B0GW54 56 aa4.59□□□□□ -1.67
NUP50-206ENST00000422489 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
NUP50-206ENST00000422489 Q8N9P0 234 aaPredicted RBP4.59□□□□□ -1.67
NUP50-206ENST00000422489 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
NUP50-206ENST00000422489 SMIM6P0DI80 62 aa4.57□□□□□ -1.68
NUP50-206ENST00000422489 Q6ZVQ6 151 aa4.57□□□□□ -1.68
NUP50-206ENST00000422489 TSTD3H0UI37 97 aa4.56□□□□□ -1.68
NUP50-206ENST00000422489 PRR15Q8IV56 129 aa4.56□□□□□ -1.68
NUP50-206ENST00000422489 MT1FP04733 61 aa4.55□□□□□ -1.68
NUP50-206ENST00000422489 WFDC13Q8IUB5 93 aa4.55□□□□□ -1.68
NUP50-206ENST00000422489 NDUFS5O43920 106 aa4.54□□□□□ -1.68
NUP50-206ENST00000422489 C9orf118A6NHY6 69 aa4.53□□□□□ -1.68
NUP50-206ENST00000422489 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
NUP50-206ENST00000422489 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
NUP50-206ENST00000422489 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
NUP50-206ENST00000422489 A0A1W2PPM0 123 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 K7EQZ3 153 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 BPY2O14599 106 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 USH2AO75445 5202 aa4.51□□□□□ -1.69
NUP50-206ENST00000422489 H3BT86 120 aa4.5□□□□□ -1.69
NUP50-206ENST00000422489 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
NUP50-206ENST00000422489 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
NUP50-206ENST00000422489 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
NUP50-206ENST00000422489 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
NUP50-206ENST00000422489 Q8N9L7 120 aa4.46□□□□□ -1.7
NUP50-206ENST00000422489 Q5W150 140 aa4.45□□□□□ -1.7
NUP50-206ENST00000422489 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
NUP50-206ENST00000422489 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
NUP50-206ENST00000422489 CASC2Q6XLA1 102 aa4.44□□□□□ -1.7
NUP50-206ENST00000422489 A0A1B0GV90 55 aa4.42□□□□□ -1.7
NUP50-206ENST00000422489 C7orf65Q6ZTY9 151 aa4.42□□□□□ -1.7
NUP50-206ENST00000422489 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
NUP50-206ENST00000422489 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
NUP50-206ENST00000422489 UBL5Q9BZL1 73 aa4.39□□□□□ -1.71
NUP50-206ENST00000422489 CXCL6P80162 114 aa4.38□□□□□ -1.71
NUP50-206ENST00000422489 COL5A1-AS1Q5SY13 56 aa4.38□□□□□ -1.71
NUP50-206ENST00000422489 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
NUP50-206ENST00000422489 K7EP34 96 aa4.35□□□□□ -1.71
NUP50-206ENST00000422489 PRO0461Q9UI25 63 aa4.35□□□□□ -1.71
NUP50-206ENST00000422489 SEC61GP60059 68 aa4.34□□□□□ -1.71
NUP50-206ENST00000422489 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
NUP50-206ENST00000422489 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
NUP50-206ENST00000422489 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
NUP50-206ENST00000422489 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
NUP50-206ENST00000422489 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms