RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
UPF3AP3-201ENST00000420996 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
UPF3AP3-201ENST00000420996 TRIAP1O43715 76 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 HSD52Q0P140 79 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 KRTAP19-6Q3LI70 58 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
UPF3AP3-201ENST00000420996 ANKRD29Q8N6D5 301 aa8.23□□□□□ -1.09
UPF3AP3-201ENST00000420996 A0A1B0GV90 55 aa8.22□□□□□ -1.09
UPF3AP3-201ENST00000420996 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
UPF3AP3-201ENST00000420996 DEFB116Q30KQ4 102 aa8.21□□□□□ -1.1
UPF3AP3-201ENST00000420996 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
UPF3AP3-201ENST00000420996 A0A1B0GV72 72 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 H3BQ85 93 aa8.15□□□□□ -1.1
UPF3AP3-201ENST00000420996 TRACP01848 142 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 CCKP06307 115 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
UPF3AP3-201ENST00000420996 SPINK7P58062 85 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 C21orf62-AS1Q17RA5 79 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
UPF3AP3-201ENST00000420996 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 A8MWP4 228 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 DNAL4O96015 105 aa8.12□□□□□ -1.11
UPF3AP3-201ENST00000420996 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
UPF3AP3-201ENST00000420996 PSMB2P49721 201 aa8.11□□□□□ -1.11
UPF3AP3-201ENST00000420996 GTF2H5Q6ZYL4 71 aa8.09□□□□□ -1.11
UPF3AP3-201ENST00000420996 KRTAP6-3Q3LI67 103 aa8.07□□□□□ -1.12
UPF3AP3-201ENST00000420996 C9orf118A6NHY6 69 aa8.06□□□□□ -1.12
UPF3AP3-201ENST00000420996 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
UPF3AP3-201ENST00000420996 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
UPF3AP3-201ENST00000420996 LYRM7Q5U5X0 104 aa8.04□□□□□ -1.12
UPF3AP3-201ENST00000420996 COX6CP09669 75 aa8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
UPF3AP3-201ENST00000420996 J3KT08 172 aa8.02□□□□□ -1.13
UPF3AP3-201ENST00000420996 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
UPF3AP3-201ENST00000420996 SCGB1C2P0DMR2 95 aa7.99□□□□□ -1.13
UPF3AP3-201ENST00000420996 A0A1W2PPM0 123 aa7.98□□□□□ -1.13
UPF3AP3-201ENST00000420996 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
UPF3AP3-201ENST00000420996 DSCR8Q96T75 97 aa7.97□□□□□ -1.13
UPF3AP3-201ENST00000420996 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
UPF3AP3-201ENST00000420996 K7EP34 96 aa7.96□□□□□ -1.14
UPF3AP3-201ENST00000420996 NDUFB1O75438 58 aa7.96□□□□□ -1.14
UPF3AP3-201ENST00000420996 Q6ZQT0 140 aa7.93□□□□□ -1.14
UPF3AP3-201ENST00000420996 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
UPF3AP3-201ENST00000420996 BAALC-AS2P0C853 105 aa7.92□□□□□ -1.14
UPF3AP3-201ENST00000420996 C9JAW5 83 aa7.91□□□□□ -1.14
UPF3AP3-201ENST00000420996 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
UPF3AP3-201ENST00000420996 F8W1H4 67 aa7.88□□□□□ -1.15
UPF3AP3-201ENST00000420996 IGKV3D-7A0A0C4DH55 119 aa7.87□□□□□ -1.15
UPF3AP3-201ENST00000420996 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
UPF3AP3-201ENST00000420996 K7ERU9 68 aa7.86□□□□□ -1.15
UPF3AP3-201ENST00000420996 Q6ZVQ6 151 aa7.86□□□□□ -1.15
UPF3AP3-201ENST00000420996 J3QR89 54 aa7.85□□□□□ -1.15
UPF3AP3-201ENST00000420996 A0A1B0GW54 56 aa7.82□□□□□ -1.16
UPF3AP3-201ENST00000420996 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
UPF3AP3-201ENST00000420996 NEBP20929 6669 aa7.79□□□□□ -1.16
UPF3AP3-201ENST00000420996 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
UPF3AP3-201ENST00000420996 LOC110117498A0A087WWA1 95 aa7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 TMEM254Q8TBM7 123 aa7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
UPF3AP3-201ENST00000420996 JMJD7-PLA2G4BH0Y9G9 81 aa7.76□□□□□ -1.17
UPF3AP3-201ENST00000420996 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
UPF3AP3-201ENST00000420996 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
UPF3AP3-201ENST00000420996 PDE6GP18545 87 aa7.73□□□□□ -1.17
UPF3AP3-201ENST00000420996 A6NN06 94 aa7.71□□□□□ -1.18
UPF3AP3-201ENST00000420996 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
UPF3AP3-201ENST00000420996 NREPQ16612 68 aa7.7□□□□□ -1.18
UPF3AP3-201ENST00000420996 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 H3BT86 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 NDUFS5O43920 106 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 ETDBQ3ZM63 59 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
UPF3AP3-201ENST00000420996 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
UPF3AP3-201ENST00000420996 MT1BP07438 61 aa7.66□□□□□ -1.18
UPF3AP3-201ENST00000420996 Q5W150 140 aa7.65□□□□□ -1.18
UPF3AP3-201ENST00000420996 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
UPF3AP3-201ENST00000420996 K7EQZ3 153 aa7.63□□□□□ -1.19
UPF3AP3-201ENST00000420996 Q5VV11 94 aa7.63□□□□□ -1.19
UPF3AP3-201ENST00000420996 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
UPF3AP3-201ENST00000420996 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
UPF3AP3-201ENST00000420996 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
UPF3AP3-201ENST00000420996 KRTAP19-8Q3LI54 63 aa7.6□□□□□ -1.19
UPF3AP3-201ENST00000420996 C5orf47Q569G3 176 aa7.6□□□□□ -1.19
UPF3AP3-201ENST00000420996 H3BS24 57 aa7.58□□□□□ -1.2
UPF3AP3-201ENST00000420996 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
UPF3AP3-201ENST00000420996 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
UPF3AP3-201ENST00000420996 ACYP1P07311 99 aa7.54□□□□□ -1.2
UPF3AP3-201ENST00000420996 KRTAP5-9P26371 169 aa7.54□□□□□ -1.2
UPF3AP3-201ENST00000420996 BPY2O14599 106 aa7.52□□□□□ -1.21
UPF3AP3-201ENST00000420996 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
UPF3AP3-201ENST00000420996 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
UPF3AP3-201ENST00000420996 FAM240AA0A1B0GVK7 77 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 Q8N9L7 120 aa7.5□□□□□ -1.21
UPF3AP3-201ENST00000420996 S4R3F8 94 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms