RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 A0A1B0GW54 56 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 IGKV2-29A2NJV5 120 aaPredicted RBP3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 LECT2O14960 151 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 PSPHP1O15172 72 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 NDUFB1O75438 58 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 PRR3P79522 188 aaKnown RBP3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 LINC00337Q8N6G1 96 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 C20orf203Q8NBC4 194 aa3.11□□□□□ -1.91
ATG4AP1-201ENST00000416893 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 REG3AQ06141 175 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 C9orf116Q5BN46 136 aaPredicted RBP3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 KRTAP26-1Q6PEX3 210 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 Q8N814 137 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
ATG4AP1-201ENST00000416893 IGLV10-54A0A075B6I4 117 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 BPY2O14599 106 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 SCXQ7RTU7 201 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 MIR7-3HGQ8N6C7 128 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
ATG4AP1-201ENST00000416893 IGLV4-3A0A075B6K6 122 aa3.08□□□□□ -1.92
ATG4AP1-201ENST00000416893 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
ATG4AP1-201ENST00000416893 RPL39P62891 51 aaKnown RBP3.08□□□□□ -1.92
ATG4AP1-201ENST00000416893 Q9BRP9 147 aa3.08□□□□□ -1.92
ATG4AP1-201ENST00000416893 IGHV6-1A0A0B4J1U7 121 aa3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 NCR3O14931 201 aa3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 C6orf99Q4VX62 202 aa3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
ATG4AP1-201ENST00000416893 LINC00959A0A1B0GUT2 108 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 HAMPP81172 84 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 Q6ZQT0 140 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 C15orf56Q8N910 161 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 TNXBP22105 4242 aa3.06□□□□□ -1.92
ATG4AP1-201ENST00000416893 A6NED7 52 aa3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 CNBPP62633 177 aaKnown RBP3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 MOBPQ13875 183 aa3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 CASC2Q6XLA1 102 aa3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 Q6ZSA8 131 aa3.05□□□□□ -1.92
ATG4AP1-201ENST00000416893 GVQW2A0A096LPI5 108 aaPredicted RBP3.04□□□□□ -1.92
ATG4AP1-201ENST00000416893 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
ATG4AP1-201ENST00000416893 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
ATG4AP1-201ENST00000416893 SMIM11BQ8TCY0 68 aa3.04□□□□□ -1.92
ATG4AP1-201ENST00000416893 IGHV3-64A0A075B6Q5 118 aa3.03□□□□□ -1.92
ATG4AP1-201ENST00000416893 C9orf163Q8N9P6 203 aa3.03□□□□□ -1.92
ATG4AP1-201ENST00000416893 PRR15LQ9BU68 103 aa3.03□□□□□ -1.92
ATG4AP1-201ENST00000416893 H3BPC8 53 aa3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 SMR3BP02814 79 aaPredicted RBP3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 Q5VSD8 79 aa3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 HIGD2AQ9BW72 106 aa3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 XAGE1AQ9HD64 81 aa3.02□□□□□ -1.93
ATG4AP1-201ENST00000416893 PANO1I0J062 215 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 CHTF8P0CG12 524 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 SPAG11BQ08648 103 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 LINC00242Q5T6M2 205 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 SND1-IT1Q9HBX3 110 aa3.01□□□□□ -1.93
ATG4AP1-201ENST00000416893 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 IGKV2-28A0A075B6P5 120 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 A8MU10 97 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 IGKV2D-28P01615 120 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 COX6A2Q02221 97 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 SPACA4Q8TDM5 124 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 PLAC8Q9NZF1 115 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 ZNF706Q9Y5V0 76 aaPredicted RBP3□□□□□ -1.93
ATG4AP1-201ENST00000416893 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
ATG4AP1-201ENST00000416893 A0A096LNI7 61 aa2.99□□□□□ -1.93
ATG4AP1-201ENST00000416893 IGKV2-24A0A0C4DH68 120 aa2.99□□□□□ -1.93
ATG4AP1-201ENST00000416893 KRTAP13-3Q3SY46 172 aa2.99□□□□□ -1.93
ATG4AP1-201ENST00000416893 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
ATG4AP1-201ENST00000416893 CDKN2A-AS1Q9UH64 79 aa2.99□□□□□ -1.93
ATG4AP1-201ENST00000416893 ETDCA0A1B0GVM5 59 aa2.98□□□□□ -1.93
ATG4AP1-201ENST00000416893 RPL37AP8A6NKH3 93 aa2.98□□□□□ -1.93
ATG4AP1-201ENST00000416893 IGKV4-1P06312 121 aa2.98□□□□□ -1.93
ATG4AP1-201ENST00000416893 LRP2P98164 4655 aa2.98□□□□□ -1.93
ATG4AP1-201ENST00000416893 COX7BP24311 80 aa2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 REG3GQ6UW15 175 aa2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 UNQ6190/PRO20217Q6UXQ8 127 aa2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 KCNQ1DNQ9H478 68 aa2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 C6orf48Q9UBA6 75 aa2.97□□□□□ -1.93
ATG4AP1-201ENST00000416893 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
ATG4AP1-201ENST00000416893 RPL37AP61513 92 aaKnown RBP2.96□□□□□ -1.94
ATG4AP1-201ENST00000416893 Q8IZM0 81 aa2.96□□□□□ -1.94
ATG4AP1-201ENST00000416893 TOMM7Q9P0U1 55 aa2.96□□□□□ -1.94
ATG4AP1-201ENST00000416893 TLX1NBP0CAT3 122 aa2.95□□□□□ -1.94
ATG4AP1-201ENST00000416893 LINC00575Q6W349 94 aa2.95□□□□□ -1.94
ATG4AP1-201ENST00000416893 COX7B2Q8TF08 81 aa2.95□□□□□ -1.94
ATG4AP1-201ENST00000416893 C7orf33Q8WU49 177 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms