RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	KRTAP9-3	Q9BYQ3	159 aa		4.42	□□□□□ -1.7
CCT3-208	ENST00000415548	LOC105371267	A0A1B0GV96	52 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	TSTD3	H0UI37	97 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	IGKV4-1	P06312	121 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	DSCR10	P59022	87 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	RBM3	P98179	157 aa	Known RBP	4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	ATXN8	Q156A1	80 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	ATP11AUN	Q6ZP68	121 aa		4.41	□□□□□ -1.7
CCT3-208	ENST00000415548	BATF	Q16520	125 aa		4.4	□□□□□ -1.71
CCT3-208	ENST00000415548	DEFB116	Q30KQ4	102 aa		4.4	□□□□□ -1.71
CCT3-208	ENST00000415548	DSCR8	Q96T75	97 aa		4.4	□□□□□ -1.71
CCT3-208	ENST00000415548	LINC00472	Q9H8W2	130 aa		4.4	□□□□□ -1.71
CCT3-208	ENST00000415548		A8MUU9	505 aa		4.39	□□□□□ -1.71
CCT3-208	ENST00000415548	MT1H	P80294	61 aa		4.39	□□□□□ -1.71
CCT3-208	ENST00000415548	C20orf166-AS1	Q96NR2	134 aa		4.39	□□□□□ -1.71
CCT3-208	ENST00000415548	FLG	P20930	4061 aa	Predicted RBP	4.38	□□□□□ -1.71
CCT3-208	ENST00000415548		C9JAW5	83 aa		4.38	□□□□□ -1.71
CCT3-208	ENST00000415548	LINC00313	P59037	77 aa		4.37	□□□□□ -1.71
CCT3-208	ENST00000415548	COX6B2	Q6YFQ2	88 aa		4.37	□□□□□ -1.71
CCT3-208	ENST00000415548	NOTCH2NL	Q7Z3S9	236 aa		4.37	□□□□□ -1.71
CCT3-208	ENST00000415548	IGHV6-1	A0A0B4J1U7	121 aa		4.36	□□□□□ -1.71
CCT3-208	ENST00000415548	KRTAP16-1	A8MUX0	517 aa		4.36	□□□□□ -1.71
CCT3-208	ENST00000415548	LYRM7	Q5U5X0	104 aa		4.36	□□□□□ -1.71
CCT3-208	ENST00000415548	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.35	□□□□□ -1.71
CCT3-208	ENST00000415548		Q6ZQT0	140 aa		4.35	□□□□□ -1.71
CCT3-208	ENST00000415548	TRBV20-1	A0A075B6N2	111 aa		4.34	□□□□□ -1.71
CCT3-208	ENST00000415548	LOC110117498	A0A087WWA1	95 aa		4.34	□□□□□ -1.71
CCT3-208	ENST00000415548	C9orf118	A6NHY6	69 aa		4.34	□□□□□ -1.71
CCT3-208	ENST00000415548	TAX1BP3	O14907	124 aa		4.34	□□□□□ -1.71
CCT3-208	ENST00000415548		A0A1B0GVX0	72 aa		4.33	□□□□□ -1.72
CCT3-208	ENST00000415548	C21orf62-AS1	Q17RA5	79 aa		4.33	□□□□□ -1.72
CCT3-208	ENST00000415548	C14orf132	Q9NPU4	83 aa		4.33	□□□□□ -1.72
CCT3-208	ENST00000415548		J3KT08	172 aa		4.32	□□□□□ -1.72
CCT3-208	ENST00000415548		A0A1W2PPM0	123 aa		4.31	□□□□□ -1.72
CCT3-208	ENST00000415548	C8orf87	E5RJ46	101 aa		4.31	□□□□□ -1.72
CCT3-208	ENST00000415548	PDE6G	P18545	87 aa		4.31	□□□□□ -1.72
CCT3-208	ENST00000415548		A0A1B0GW54	56 aa		4.3	□□□□□ -1.72
CCT3-208	ENST00000415548		M0R2T5	61 aa		4.3	□□□□□ -1.72
CCT3-208	ENST00000415548	MTURN	Q8N3F0	131 aa		4.3	□□□□□ -1.72
CCT3-208	ENST00000415548		H3BT86	120 aa		4.29	□□□□□ -1.72
CCT3-208	ENST00000415548	KRTAP10-6	P60371	365 aa	Predicted RBP	4.29	□□□□□ -1.72
CCT3-208	ENST00000415548	NDUFB1	O75438	58 aa		4.28	□□□□□ -1.72
CCT3-208	ENST00000415548		A8MWP4	228 aa		4.27	□□□□□ -1.73
CCT3-208	ENST00000415548	IGKV3D-7	A0A0C4DH55	119 aa		4.26	□□□□□ -1.73
CCT3-208	ENST00000415548	NREP	Q16612	68 aa		4.26	□□□□□ -1.73
CCT3-208	ENST00000415548	C8orf17	Q9NRJ1	99 aa		4.26	□□□□□ -1.73
CCT3-208	ENST00000415548	SPCS1	Q9Y6A9	102 aa		4.26	□□□□□ -1.73
CCT3-208	ENST00000415548	HRES1	P13985	223 aa		4.24	□□□□□ -1.73
CCT3-208	ENST00000415548	COL5A1-AS1	Q5SY13	56 aa		4.24	□□□□□ -1.73
CCT3-208	ENST00000415548		Q8N9P0	234 aa	Predicted RBP	4.24	□□□□□ -1.73
CCT3-208	ENST00000415548	ZCCHC13	Q8WW36	166 aa	Known RBP	4.24	□□□□□ -1.73
CCT3-208	ENST00000415548	FAM236D	A0A1B0GTK5	79 aa		4.23	□□□□□ -1.73
CCT3-208	ENST00000415548	FAM236C	P0DP71	79 aa		4.23	□□□□□ -1.73
CCT3-208	ENST00000415548	PRR15	Q8IV56	129 aa		4.23	□□□□□ -1.73
CCT3-208	ENST00000415548	MPLKIP	Q8TAP9	179 aa		4.23	□□□□□ -1.73
CCT3-208	ENST00000415548		Q6ZVQ6	151 aa		4.22	□□□□□ -1.73
CCT3-208	ENST00000415548	MMP24-AS1	A0A0U1RRL7	71 aa		4.21	□□□□□ -1.74
CCT3-208	ENST00000415548	RBM12B-AS1	Q9P1G2	102 aa		4.21	□□□□□ -1.74
CCT3-208	ENST00000415548		K7EP34	96 aa		4.2	□□□□□ -1.74
CCT3-208	ENST00000415548		K7EQZ3	153 aa		4.2	□□□□□ -1.74
CCT3-208	ENST00000415548	SPINK7	P58062	85 aa		4.2	□□□□□ -1.74
CCT3-208	ENST00000415548	PRO0461	Q9UI25	63 aa		4.2	□□□□□ -1.74
CCT3-208	ENST00000415548	FSIP2	Q5CZC0	6907 aa		4.2	□□□□□ -1.74
CCT3-208	ENST00000415548	BPY2	O14599	106 aa		4.19	□□□□□ -1.74
CCT3-208	ENST00000415548	TMEM254	Q8TBM7	123 aa		4.19	□□□□□ -1.74
CCT3-208	ENST00000415548	PCP4L1	A6NKN8	68 aa		4.18	□□□□□ -1.74
CCT3-208	ENST00000415548	MRPL34	Q9BQ48	92 aa	Known RBP	4.18	□□□□□ -1.74
CCT3-208	ENST00000415548	hDV103S1	A0JD37	113 aa		4.17	□□□□□ -1.74
CCT3-208	ENST00000415548	NDUFS5	O43920	106 aa		4.16	□□□□□ -1.74
CCT3-208	ENST00000415548		Q8N9L7	120 aa		4.16	□□□□□ -1.74
CCT3-208	ENST00000415548	CRCT1	Q9UGL9	99 aa		4.16	□□□□□ -1.74
CCT3-208	ENST00000415548	KRTAP9-8	Q9BYQ0	159 aa		4.15	□□□□□ -1.75
CCT3-208	ENST00000415548	WFDC13	Q8IUB5	93 aa		4.14	□□□□□ -1.75
CCT3-208	ENST00000415548	LINC00846	Q9NV44	126 aa		4.14	□□□□□ -1.75
CCT3-208	ENST00000415548	GTF2H5	Q6ZYL4	71 aa		4.13	□□□□□ -1.75
CCT3-208	ENST00000415548	USH2A	O75445	5202 aa		4.12	□□□□□ -1.75
CCT3-208	ENST00000415548	CASC2	Q6XLA1	102 aa		4.12	□□□□□ -1.75
CCT3-208	ENST00000415548	UBL5	Q9BZL1	73 aa		4.12	□□□□□ -1.75
CCT3-208	ENST00000415548	MT2A	P02795	61 aa		4.11	□□□□□ -1.75
CCT3-208	ENST00000415548		Q5W150	140 aa		4.11	□□□□□ -1.75
CCT3-208	ENST00000415548	HCG22	E2RYF7	251 aa		4.1	□□□□□ -1.75
CCT3-208	ENST00000415548		F8W1H4	67 aa		4.1	□□□□□ -1.75
CCT3-208	ENST00000415548	ETDB	Q3ZM63	59 aa		4.1	□□□□□ -1.75
CCT3-208	ENST00000415548	KRTAP5-3	Q6L8H2	238 aa		4.1	□□□□□ -1.75
CCT3-208	ENST00000415548	IGKV2D-30	A0A075B6S6	120 aa		4.09	□□□□□ -1.75
CCT3-208	ENST00000415548	IGKV2-30	P06310	120 aa		4.09	□□□□□ -1.75
CCT3-208	ENST00000415548	SSPO	A2VEC9	5147 aa		4.08	□□□□□ -1.76
CCT3-208	ENST00000415548	MT1F	P04733	61 aa		4.08	□□□□□ -1.76
CCT3-208	ENST00000415548	CXCL6	P80162	114 aa		4.06	□□□□□ -1.76
CCT3-208	ENST00000415548	C7orf65	Q6ZTY9	151 aa		4.06	□□□□□ -1.76
CCT3-208	ENST00000415548	KRTAP10-10	P60014	251 aa		4.05	□□□□□ -1.76
CCT3-208	ENST00000415548	H1FX-AS1	Q4G0G2	97 aa		4.04	□□□□□ -1.76
CCT3-208	ENST00000415548	KRTAP3-1	Q9BYR8	98 aa		4.03	□□□□□ -1.76
CCT3-208	ENST00000415548	C4orf26	Q17RF5	130 aa		4.01	□□□□□ -1.77
CCT3-208	ENST00000415548	ACYP1	P07311	99 aa		3.99	□□□□□ -1.77
CCT3-208	ENST00000415548	TP53AIP1	Q9HCN2	124 aa		3.99	□□□□□ -1.77
CCT3-208	ENST00000415548	FAM240A	A0A1B0GVK7	77 aa		3.97	□□□□□ -1.77
CCT3-208	ENST00000415548		A0A1B0GV90	55 aa		3.95	□□□□□ -1.78
CCT3-208	ENST00000415548	ATP5EP2	Q5VTU8	51 aa		3.95	□□□□□ -1.78
CCT3-208	ENST00000415548	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.94	□□□□□ -1.78

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