RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SPAG11AQ6PDA7 123 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 DMAC1Q96GE9 116 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 Q96NJ1 140 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 R4GN34 69 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 COL12A1Q99715 3063 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 IGF2RP11717 2491 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 NAV2Q8IVL1 2488 aa1.97□□□□□ -2.09
HMGB3P23-201ENST00000414981 MXRA5Q9NR99 2828 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 CHD6Q8TD26 2715 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 A0A096LNI7 61 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 A0A1W2PNN7 141 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 UQCR11O14957 56 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 SPINK7P58062 85 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 ACACBO00763 2458 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 LAMA5O15230 3695 aa1.96□□□□□ -2.1
HMGB3P23-201ENST00000414981 SVEP1Q4LDE5 3571 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 FN1P02751 2386 aaKnown RBP1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 RELNP78509 3460 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 ZFHX3Q15911 3703 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 PRLHP81277 87 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 CRYBG3Q68DQ2 2970 aa1.95□□□□□ -2.1
HMGB3P23-201ENST00000414981 JMJD1CQ15652 2540 aa1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 A0A1B0GU69 56 aa1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 SSBP3-AS1Q7Z2R9 100 aa1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 SETXQ7Z333 2677 aaKnown RBP1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 NCOR2Q9Y618 2525 aa1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 PTPN13Q12923 2485 aa1.94□□□□□ -2.1
HMGB3P23-201ENST00000414981 TEX15Q9BXT5 2789 aa1.93□□□□□ -2.1
HMGB3P23-201ENST00000414981 ITPR1Q14643 2758 aa1.93□□□□□ -2.1
HMGB3P23-201ENST00000414981 CELSR2Q9HCU4 2923 aa1.93□□□□□ -2.1
HMGB3P23-201ENST00000414981 VPS13CQ709C8 3753 aa1.93□□□□□ -2.1
HMGB3P23-201ENST00000414981 ZFYVE26Q68DK2 2539 aa1.92□□□□□ -2.1
HMGB3P23-201ENST00000414981 FBN2P35556 2912 aa1.92□□□□□ -2.1
HMGB3P23-201ENST00000414981 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
HMGB3P23-201ENST00000414981 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
HMGB3P23-201ENST00000414981 PKD1L2Q7Z442 2459 aa1.92□□□□□ -2.1
HMGB3P23-201ENST00000414981 ZANQ9Y493 2812 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 SPACA4Q8TDM5 124 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 PSORS1C2Q9UIG4 136 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 LRRK2Q5S007 2527 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 EPG5Q9HCE0 2579 aa1.91□□□□□ -2.1
HMGB3P23-201ENST00000414981 UTP20O75691 2785 aaKnown RBP1.9□□□□□ -2.1
HMGB3P23-201ENST00000414981 APCP25054 2843 aa1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 J3QKU1 62 aa1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 KMT2BQ9UMN6 2715 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 SONP18583 2426 aaKnown RBP1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 FAM208BQ5VWN6 2430 aa1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 ITPR3Q14573 2671 aa1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 NBPF19A0A087WUL8 3843 aa1.9□□□□□ -2.11
HMGB3P23-201ENST00000414981 CACNA1AO00555 2505 aa1.89□□□□□ -2.11
HMGB3P23-201ENST00000414981 UBR5O95071 2799 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P23-201ENST00000414981 AKAP9Q99996 3911 aa1.89□□□□□ -2.11
HMGB3P23-201ENST00000414981 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 LY6G6CO95867 125 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 APLNQ9ULZ1 77 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 ABCA12Q86UK0 2595 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 SPTBN4Q9H254 2564 aa1.88□□□□□ -2.11
HMGB3P23-201ENST00000414981 POLQO75417 2590 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 A0A087WTM6 91 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 NBDYA0A0U1RRE5 68 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 UBE2DNLQ8IWF7 75 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 SMR3AQ99954 134 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 GCN1Q92616 2671 aaKnown RBP1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 CFAP46Q8IYW2 2715 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 MYO18BQ8IUG5 2567 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 CHD8Q9HCK8 2581 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 NBEAL2Q6ZNJ1 2754 aa1.87□□□□□ -2.11
HMGB3P23-201ENST00000414981 PIEZO1Q92508 2521 aa1.86□□□□□ -2.11
HMGB3P23-201ENST00000414981 FLNCQ14315 2725 aa1.86□□□□□ -2.11
HMGB3P23-201ENST00000414981 FLNAP21333 2647 aaKnown RBP1.86□□□□□ -2.11
HMGB3P23-201ENST00000414981 ZNF462Q96JM2 2506 aa1.86□□□□□ -2.11
HMGB3P23-201ENST00000414981 IGSF10Q6WRI0 2623 aa1.86□□□□□ -2.11
HMGB3P23-201ENST00000414981 NF1P21359 2839 aa1.85□□□□□ -2.11
HMGB3P23-201ENST00000414981 CCDC168Q8NDH2 2452 aa1.85□□□□□ -2.11
HMGB3P23-201ENST00000414981 RPS29P62273 56 aaKnown RBP1.85□□□□□ -2.11
HMGB3P23-201ENST00000414981 CSMD2Q7Z408 3487 aa1.84□□□□□ -2.11
HMGB3P23-201ENST00000414981 PDZD2O15018 2839 aa1.84□□□□□ -2.11
HMGB3P23-201ENST00000414981 K7EIL1 84 aa1.84□□□□□ -2.11
HMGB3P23-201ENST00000414981 MTORP42345 2549 aa1.83□□□□□ -2.12
HMGB3P23-201ENST00000414981 SETD2Q9BYW2 2564 aaPredicted RBP1.83□□□□□ -2.12
HMGB3P23-201ENST00000414981 UNC79Q9P2D8 2635 aa1.83□□□□□ -2.12
HMGB3P23-201ENST00000414981 COX6B2Q6YFQ2 88 aa1.83□□□□□ -2.12
HMGB3P23-201ENST00000414981 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
HMGB3P23-201ENST00000414981 ANK3Q12955 4377 aaKnown RBP1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 NIPBLQ6KC79 2804 aaeCLIP1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 HIVEP1P15822 2718 aa1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 SPINK1P00995 79 aa1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 SPINK6Q6UWN8 80 aa1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 LINC00304Q8N9R0 145 aa1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 ZNF469Q96JG9 3925 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P23-201ENST00000414981 TENM2Q9NT68 2774 aa1.81□□□□□ -2.12
HMGB3P23-201ENST00000414981 F8P00451 2351 aa1.81□□□□□ -2.12
HMGB3P23-201ENST00000414981 ACANP16112 2415 aa1.81□□□□□ -2.12
HMGB3P23-201ENST00000414981 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms