RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 J3KT08 172 aa5.82□□□□□ -1.48
RFFL-204ENST00000414419 PDE6GP18545 87 aa5.82□□□□□ -1.48
RFFL-204ENST00000414419 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
RFFL-204ENST00000414419 Q6ZQT0 140 aa5.81□□□□□ -1.48
RFFL-204ENST00000414419 NOTCH2NLQ7Z3S9 236 aa5.81□□□□□ -1.48
RFFL-204ENST00000414419 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
RFFL-204ENST00000414419 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
RFFL-204ENST00000414419 A0A1B0GW54 56 aa5.8□□□□□ -1.48
RFFL-204ENST00000414419 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
RFFL-204ENST00000414419 NDUFB1O75438 58 aa5.8□□□□□ -1.48
RFFL-204ENST00000414419 TAX1BP3O14907 124 aa5.79□□□□□ -1.48
RFFL-204ENST00000414419 C14orf132Q9NPU4 83 aa5.79□□□□□ -1.48
RFFL-204ENST00000414419 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
RFFL-204ENST00000414419 K7ERU9 68 aa5.76□□□□□ -1.49
RFFL-204ENST00000414419 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
RFFL-204ENST00000414419 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
RFFL-204ENST00000414419 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
RFFL-204ENST00000414419 H3BT86 120 aa5.74□□□□□ -1.49
RFFL-204ENST00000414419 NREPQ16612 68 aa5.74□□□□□ -1.49
RFFL-204ENST00000414419 A8MWP4 228 aa5.73□□□□□ -1.49
RFFL-204ENST00000414419 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
RFFL-204ENST00000414419 FAM236DA0A1B0GTK5 79 aa5.72□□□□□ -1.49
RFFL-204ENST00000414419 FAM236CP0DP71 79 aa5.72□□□□□ -1.49
RFFL-204ENST00000414419 GTF2H5Q6ZYL4 71 aa5.72□□□□□ -1.49
RFFL-204ENST00000414419 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
RFFL-204ENST00000414419 MTURNQ8N3F0 131 aa5.71□□□□□ -1.5
RFFL-204ENST00000414419 K7EP34 96 aa5.7□□□□□ -1.5
RFFL-204ENST00000414419 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
RFFL-204ENST00000414419 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
RFFL-204ENST00000414419 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
RFFL-204ENST00000414419 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
RFFL-204ENST00000414419 SPCS1Q9Y6A9 102 aa5.69□□□□□ -1.5
RFFL-204ENST00000414419 FLGP20930 4061 aaPredicted RBP5.69□□□□□ -1.5
RFFL-204ENST00000414419 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
RFFL-204ENST00000414419 Q6ZVQ6 151 aa5.67□□□□□ -1.5
RFFL-204ENST00000414419 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
RFFL-204ENST00000414419 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
RFFL-204ENST00000414419 HRES1P13985 223 aa5.66□□□□□ -1.5
RFFL-204ENST00000414419 BPY2O14599 106 aa5.64□□□□□ -1.51
RFFL-204ENST00000414419 SPINK7P58062 85 aa5.64□□□□□ -1.51
RFFL-204ENST00000414419 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
RFFL-204ENST00000414419 K7EQZ3 153 aa5.62□□□□□ -1.51
RFFL-204ENST00000414419 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
RFFL-204ENST00000414419 MRPL34Q9BQ48 92 aaKnown RBP5.62□□□□□ -1.51
RFFL-204ENST00000414419 MMP24-AS1A0A0U1RRL7 71 aa5.61□□□□□ -1.51
RFFL-204ENST00000414419 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
RFFL-204ENST00000414419 NDUFS5O43920 106 aa5.61□□□□□ -1.51
RFFL-204ENST00000414419 J3QR89 54 aa5.59□□□□□ -1.51
RFFL-204ENST00000414419 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
RFFL-204ENST00000414419 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
RFFL-204ENST00000414419 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
RFFL-204ENST00000414419 F8W1H4 67 aa5.57□□□□□ -1.52
RFFL-204ENST00000414419 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
RFFL-204ENST00000414419 UBL5Q9BZL1 73 aa5.56□□□□□ -1.52
RFFL-204ENST00000414419 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
RFFL-204ENST00000414419 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
RFFL-204ENST00000414419 Q8N9L7 120 aa5.54□□□□□ -1.52
RFFL-204ENST00000414419 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
RFFL-204ENST00000414419 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
RFFL-204ENST00000414419 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
RFFL-204ENST00000414419 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
RFFL-204ENST00000414419 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
RFFL-204ENST00000414419 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
RFFL-204ENST00000414419 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
RFFL-204ENST00000414419 MT2AP02795 61 aa5.47□□□□□ -1.53
RFFL-204ENST00000414419 CXCL6P80162 114 aa5.47□□□□□ -1.53
RFFL-204ENST00000414419 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
RFFL-204ENST00000414419 Q5W150 140 aa5.47□□□□□ -1.53
RFFL-204ENST00000414419 KRTAP10-10P60014 251 aa5.46□□□□□ -1.54
RFFL-204ENST00000414419 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
RFFL-204ENST00000414419 MT1FP04733 61 aa5.43□□□□□ -1.54
RFFL-204ENST00000414419 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
RFFL-204ENST00000414419 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
RFFL-204ENST00000414419 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
RFFL-204ENST00000414419 ACYP1P07311 99 aa5.37□□□□□ -1.55
RFFL-204ENST00000414419 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
RFFL-204ENST00000414419 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
RFFL-204ENST00000414419 FAM240AA0A1B0GVK7 77 aa5.32□□□□□ -1.56
RFFL-204ENST00000414419 LCE2BO14633 110 aa5.32□□□□□ -1.56
RFFL-204ENST00000414419 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
RFFL-204ENST00000414419 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
RFFL-204ENST00000414419 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
RFFL-204ENST00000414419 USH2AO75445 5202 aa5.28□□□□□ -1.56
RFFL-204ENST00000414419 C5orf47Q569G3 176 aa5.27□□□□□ -1.57
RFFL-204ENST00000414419 S4R3F8 94 aa5.27□□□□□ -1.57
RFFL-204ENST00000414419 TRAV22A0A0B4J277 110 aa5.26□□□□□ -1.57
RFFL-204ENST00000414419 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
RFFL-204ENST00000414419 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
RFFL-204ENST00000414419 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
RFFL-204ENST00000414419 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
RFFL-204ENST00000414419 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
RFFL-204ENST00000414419 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
RFFL-204ENST00000414419 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
RFFL-204ENST00000414419 FAM236AA0A1B0GUQ0 79 aa5.22□□□□□ -1.57
RFFL-204ENST00000414419 FAM236BA0A1B0GV22 79 aa5.22□□□□□ -1.57
RFFL-204ENST00000414419 UQCRQO14949 82 aa5.22□□□□□ -1.57
RFFL-204ENST00000414419 LINC00643Q86TS7 51 aa5.22□□□□□ -1.57
RFFL-204ENST00000414419 SSPOA2VEC9 5147 aa5.21□□□□□ -1.57
RFFL-204ENST00000414419 LCA10Q71F78 164 aa5.21□□□□□ -1.58
RFFL-204ENST00000414419 ATOX1O00244 68 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms