RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 IGKV4-1P06312 121 aa12.06□□□□□ -0.48
AC005540.1-201ENST00000413911 KRTAP10-10P60014 251 aa12.05□□□□□ -0.48
AC005540.1-201ENST00000413911 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
AC005540.1-201ENST00000413911 TRBV7-4A0A0J9YYF1 115 aa12.03□□□□□ -0.48
AC005540.1-201ENST00000413911 TSTD3H0UI37 97 aa12.03□□□□□ -0.48
AC005540.1-201ENST00000413911 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.49
AC005540.1-201ENST00000413911 DEFB116Q30KQ4 102 aa12.01□□□□□ -0.49
AC005540.1-201ENST00000413911 NAA38Q9BRA0 125 aaKnown RBP11.99□□□□□ -0.49
AC005540.1-201ENST00000413911 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
AC005540.1-201ENST00000413911 MACF1Q9UPN3 7388 aaKnown RBP11.97□□□□□ -0.49
AC005540.1-201ENST00000413911 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
AC005540.1-201ENST00000413911 CCKP06307 115 aa11.94□□□□□ -0.5
AC005540.1-201ENST00000413911 SYNE2Q8WXH0 6885 aaKnown RBP11.93□□□□□ -0.5
AC005540.1-201ENST00000413911 IGHV6-1A0A0B4J1U7 121 aa11.93□□□□□ -0.5
AC005540.1-201ENST00000413911 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
AC005540.1-201ENST00000413911 RBM3P98179 157 aaKnown RBP11.91□□□□□ -0.5
AC005540.1-201ENST00000413911 BATFQ16520 125 aa11.88□□□□□ -0.51
AC005540.1-201ENST00000413911 DSCR8Q96T75 97 aa11.85□□□□□ -0.51
AC005540.1-201ENST00000413911 LYRM7Q5U5X0 104 aa11.84□□□□□ -0.51
AC005540.1-201ENST00000413911 VPS25Q9BRG1 176 aa11.84□□□□□ -0.51
AC005540.1-201ENST00000413911 TAX1BP3O14907 124 aa11.82□□□□□ -0.52
AC005540.1-201ENST00000413911 C9orf118A6NHY6 69 aa11.81□□□□□ -0.52
AC005540.1-201ENST00000413911 A0A1B0GVX0 72 aa11.8□□□□□ -0.52
AC005540.1-201ENST00000413911 C9JAW5 83 aa11.8□□□□□ -0.52
AC005540.1-201ENST00000413911 KRTAP19-6Q3LI70 58 aa11.8□□□□□ -0.52
AC005540.1-201ENST00000413911 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
AC005540.1-201ENST00000413911 ZCCHC13Q8WW36 166 aaKnown RBP11.78□□□□□ -0.52
AC005540.1-201ENST00000413911 C8orf87E5RJ46 101 aa11.77□□□□□ -0.53
AC005540.1-201ENST00000413911 SPINK7P58062 85 aa11.77□□□□□ -0.53
AC005540.1-201ENST00000413911 LOC110117498A0A087WWA1 95 aa11.76□□□□□ -0.53
AC005540.1-201ENST00000413911 Q6ZQT0 140 aa11.76□□□□□ -0.53
AC005540.1-201ENST00000413911 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
AC005540.1-201ENST00000413911 A0A1W2PPM0 123 aa11.74□□□□□ -0.53
AC005540.1-201ENST00000413911 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
AC005540.1-201ENST00000413911 A0A1B0GW54 56 aa11.7□□□□□ -0.54
AC005540.1-201ENST00000413911 PDE6GP18545 87 aa11.7□□□□□ -0.54
AC005540.1-201ENST00000413911 H3BT86 120 aa11.67□□□□□ -0.54
AC005540.1-201ENST00000413911 C14orf132Q9NPU4 83 aa11.67□□□□□ -0.54
AC005540.1-201ENST00000413911 J3KT08 172 aa11.66□□□□□ -0.54
AC005540.1-201ENST00000413911 Q8N9P0 234 aaPredicted RBP11.65□□□□□ -0.54
AC005540.1-201ENST00000413911 LINC00846Q9NV44 126 aa11.65□□□□□ -0.54
AC005540.1-201ENST00000413911 A8MWP4 228 aa11.63□□□□□ -0.55
AC005540.1-201ENST00000413911 WFDC13Q8IUB5 93 aa11.62□□□□□ -0.55
AC005540.1-201ENST00000413911 COL5A1-AS1Q5SY13 56 aa11.58□□□□□ -0.56
AC005540.1-201ENST00000413911 NDUFB1O75438 58 aa11.57□□□□□ -0.56
AC005540.1-201ENST00000413911 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
AC005540.1-201ENST00000413911 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
AC005540.1-201ENST00000413911 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
AC005540.1-201ENST00000413911 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
AC005540.1-201ENST00000413911 KRTAP6-3Q3LI67 103 aa11.49□□□□□ -0.57
AC005540.1-201ENST00000413911 NREPQ16612 68 aa11.48□□□□□ -0.57
AC005540.1-201ENST00000413911 PRO0461Q9UI25 63 aa11.48□□□□□ -0.57
AC005540.1-201ENST00000413911 Q6ZVQ6 151 aa11.45□□□□□ -0.58
AC005540.1-201ENST00000413911 K7EP34 96 aa11.44□□□□□ -0.58
AC005540.1-201ENST00000413911 PRR15Q8IV56 129 aa11.42□□□□□ -0.58
AC005540.1-201ENST00000413911 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
AC005540.1-201ENST00000413911 MMP24-AS1A0A0U1RRL7 71 aa11.37□□□□□ -0.59
AC005540.1-201ENST00000413911 PCP4L1A6NKN8 68 aa11.37□□□□□ -0.59
AC005540.1-201ENST00000413911 TMEM254Q8TBM7 123 aa11.33□□□□□ -0.6
AC005540.1-201ENST00000413911 MRPL34Q9BQ48 92 aaKnown RBP11.33□□□□□ -0.6
AC005540.1-201ENST00000413911 K7EQZ3 153 aa11.31□□□□□ -0.6
AC005540.1-201ENST00000413911 BPY2O14599 106 aa11.29□□□□□ -0.6
AC005540.1-201ENST00000413911 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
AC005540.1-201ENST00000413911 hDV103S1A0JD37 113 aa11.26□□□□□ -0.61
AC005540.1-201ENST00000413911 NDUFS5O43920 106 aa11.24□□□□□ -0.61
AC005540.1-201ENST00000413911 NEBP20929 6669 aa11.24□□□□□ -0.61
AC005540.1-201ENST00000413911 F8W1H4 67 aa11.22□□□□□ -0.61
AC005540.1-201ENST00000413911 Q5W150 140 aa11.2□□□□□ -0.62
AC005540.1-201ENST00000413911 IGKV2D-30A0A075B6S6 120 aa11.19□□□□□ -0.62
AC005540.1-201ENST00000413911 IGKV2-30P06310 120 aa11.19□□□□□ -0.62
AC005540.1-201ENST00000413911 Q8N9L7 120 aa11.17□□□□□ -0.62
AC005540.1-201ENST00000413911 ETDBQ3ZM63 59 aa11.15□□□□□ -0.62
AC005540.1-201ENST00000413911 UBL5Q9BZL1 73 aa11.15□□□□□ -0.62
AC005540.1-201ENST00000413911 MUC12Q9UKN1 5478 aa11.14□□□□□ -0.63
AC005540.1-201ENST00000413911 C7orf65Q6ZTY9 151 aa11.11□□□□□ -0.63
AC005540.1-201ENST00000413911 MT1BP07438 61 aa11.09□□□□□ -0.63
AC005540.1-201ENST00000413911 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
AC005540.1-201ENST00000413911 C4orf26Q17RF5 130 aa11.07□□□□□ -0.64
AC005540.1-201ENST00000413911 A6NN06 94 aa11.04□□□□□ -0.64
AC005540.1-201ENST00000413911 HCG22E2RYF7 251 aa11.03□□□□□ -0.64
AC005540.1-201ENST00000413911 C5orf47Q569G3 176 aa11.02□□□□□ -0.65
AC005540.1-201ENST00000413911 CXCL6P80162 114 aa10.98□□□□□ -0.65
AC005540.1-201ENST00000413911 KRTAP3-1Q9BYR8 98 aa10.97□□□□□ -0.65
AC005540.1-201ENST00000413911 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.65
AC005540.1-201ENST00000413911 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.65
AC005540.1-201ENST00000413911 KRTAP19-8Q3LI54 63 aa10.96□□□□□ -0.65
AC005540.1-201ENST00000413911 Q5VV11 94 aa10.94□□□□□ -0.66
AC005540.1-201ENST00000413911 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
AC005540.1-201ENST00000413911 ACYP1P07311 99 aa10.89□□□□□ -0.67
AC005540.1-201ENST00000413911 FAM240AA0A1B0GVK7 77 aa10.88□□□□□ -0.67
AC005540.1-201ENST00000413911 KRTAP10-5P60370 271 aa10.88□□□□□ -0.67
AC005540.1-201ENST00000413911 S4R3F8 94 aa10.85□□□□□ -0.67
AC005540.1-201ENST00000413911 KRTAP20-1Q3LI63 56 aa10.84□□□□□ -0.67
AC005540.1-201ENST00000413911 LCA10Q71F78 164 aa10.83□□□□□ -0.68
AC005540.1-201ENST00000413911 CSAG1Q6PB30 78 aa10.82□□□□□ -0.68
AC005540.1-201ENST00000413911 A0A1B0GV90 55 aa10.8□□□□□ -0.68
AC005540.1-201ENST00000413911 KRTAP5-9P26371 169 aa10.8□□□□□ -0.68
AC005540.1-201ENST00000413911 KMT2DO14686 5537 aa10.8□□□□□ -0.68
AC005540.1-201ENST00000413911 TP53AIP1Q9HCN2 124 aa10.79□□□□□ -0.68
AC005540.1-201ENST00000413911 MDN1Q9NU22 5596 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms