RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 Q6ZVQ6 151 aa16.52■□□□□ 0.24
CSNK1E-206ENST00000413574 A0A1B0GVX0 72 aa16.51■□□□□ 0.23
CSNK1E-206ENST00000413574 MUC2Q02817 5179 aa16.5■□□□□ 0.23
CSNK1E-206ENST00000413574 LINC00313P59037 77 aa16.49■□□□□ 0.23
CSNK1E-206ENST00000413574 A8MWP4 228 aa16.46■□□□□ 0.23
CSNK1E-206ENST00000413574 SEC61BP60468 96 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-206ENST00000413574 IGKV3D-7A0A0C4DH55 119 aa16.45■□□□□ 0.22
CSNK1E-206ENST00000413574 RPL37P61927 97 aaKnown RBP16.45■□□□□ 0.22
CSNK1E-206ENST00000413574 NDUFB1O75438 58 aa16.44■□□□□ 0.22
CSNK1E-206ENST00000413574 BPY2O14599 106 aa16.41■□□□□ 0.22
CSNK1E-206ENST00000413574 UBL5Q9BZL1 73 aa16.41■□□□□ 0.22
CSNK1E-206ENST00000413574 KRTAP16-1A8MUX0 517 aa16.4■□□□□ 0.22
CSNK1E-206ENST00000413574 PCOTHQ58A44 107 aa16.39■□□□□ 0.21
CSNK1E-206ENST00000413574 C8orf87E5RJ46 101 aa16.37■□□□□ 0.21
CSNK1E-206ENST00000413574 Q75L30 129 aa16.36■□□□□ 0.21
CSNK1E-206ENST00000413574 PRR15Q8IV56 129 aa16.36■□□□□ 0.21
CSNK1E-206ENST00000413574 K7EQZ3 153 aa16.34■□□□□ 0.21
CSNK1E-206ENST00000413574 C20orf166-AS1Q96NR2 134 aa16.34■□□□□ 0.21
CSNK1E-206ENST00000413574 A8MUU9 505 aa16.32■□□□□ 0.2
CSNK1E-206ENST00000413574 C8orf17Q9NRJ1 99 aa16.31■□□□□ 0.2
CSNK1E-206ENST00000413574 KRTAP4-1Q9BYQ7 146 aa16.3■□□□□ 0.2
CSNK1E-206ENST00000413574 Q8N9L7 120 aa16.3■□□□□ 0.2
CSNK1E-206ENST00000413574 ACYP1P07311 99 aa16.26■□□□□ 0.19
CSNK1E-206ENST00000413574 FAM240AA0A1B0GVK7 77 aa16.24■□□□□ 0.19
CSNK1E-206ENST00000413574 MMP24-AS1A0A0U1RRL7 71 aa16.22■□□□□ 0.19
CSNK1E-206ENST00000413574 ATP11AUNQ6ZP68 121 aa16.22■□□□□ 0.19
CSNK1E-206ENST00000413574 CXCL6P80162 114 aa16.12■□□□□ 0.17
CSNK1E-206ENST00000413574 Q8N9P0 234 aaPredicted RBP16.11■□□□□ 0.17
CSNK1E-206ENST00000413574 hDV103S1A0JD37 113 aa16.1■□□□□ 0.17
CSNK1E-206ENST00000413574 TMEM254Q8TBM7 123 aa16.08■□□□□ 0.17
CSNK1E-206ENST00000413574 WFDC13Q8IUB5 93 aa16.07■□□□□ 0.16
CSNK1E-206ENST00000413574 MRPL34Q9BQ48 92 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-206ENST00000413574 J3QR89 54 aa16.03■□□□□ 0.16
CSNK1E-206ENST00000413574 CASC2Q6XLA1 102 aa16.01■□□□□ 0.15
CSNK1E-206ENST00000413574 HCG22E2RYF7 251 aa15.97■□□□□ 0.15
CSNK1E-206ENST00000413574 FAT4Q6V0I7 4981 aa15.95■□□□□ 0.14
CSNK1E-206ENST00000413574 NDUFS5O43920 106 aa15.95■□□□□ 0.14
CSNK1E-206ENST00000413574 ZCCHC13Q8WW36 166 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-206ENST00000413574 ATP5EP2Q5VTU8 51 aa15.94■□□□□ 0.14
CSNK1E-206ENST00000413574 LINC00643Q86TS7 51 aa15.94■□□□□ 0.14
CSNK1E-206ENST00000413574 HIST1H4AP62805 103 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-206ENST00000413574 A0A0U1RQV1 116 aa15.84■□□□□ 0.13
CSNK1E-206ENST00000413574 K7ERU9 68 aa15.8■□□□□ 0.12
CSNK1E-206ENST00000413574 KRTAP19-2Q3LHN2 52 aa15.77■□□□□ 0.12
CSNK1E-206ENST00000413574 Q5W150 140 aa15.76■□□□□ 0.11
CSNK1E-206ENST00000413574 A0A087WVE0 104 aa15.75■□□□□ 0.11
CSNK1E-206ENST00000413574 LCE2CQ5TA81 110 aa15.69■□□□□ 0.1
CSNK1E-206ENST00000413574 SPINK7P58062 85 aa15.68■□□□□ 0.1
CSNK1E-206ENST00000413574 HRES1P13985 223 aa15.62■□□□□ 0.09
CSNK1E-206ENST00000413574 COX6B2Q6YFQ2 88 aa15.58■□□□□ 0.09
CSNK1E-206ENST00000413574 TP53AIP1Q9HCN2 124 aa15.58■□□□□ 0.09
CSNK1E-206ENST00000413574 IGKV2D-30A0A075B6S6 120 aa15.54■□□□□ 0.08
CSNK1E-206ENST00000413574 MT-ATP8P03928 68 aa15.54■□□□□ 0.08
CSNK1E-206ENST00000413574 IGKV2-30P06310 120 aa15.54■□□□□ 0.08
CSNK1E-206ENST00000413574 LCE2AQ5TA79 106 aaPredicted RBP15.54■□□□□ 0.08
CSNK1E-206ENST00000413574 MPLKIPQ8TAP9 179 aa15.52■□□□□ 0.08
CSNK1E-206ENST00000413574 C7orf65Q6ZTY9 151 aa15.45■□□□□ 0.06
CSNK1E-206ENST00000413574 RBM12B-AS1Q9P1G2 102 aa15.45■□□□□ 0.06
CSNK1E-206ENST00000413574 FLGP20930 4061 aaPredicted RBP15.44■□□□□ 0.06
CSNK1E-206ENST00000413574 MT1HP80294 61 aa15.43■□□□□ 0.06
CSNK1E-206ENST00000413574 FAM236DA0A1B0GTK5 79 aa15.4■□□□□ 0.06
CSNK1E-206ENST00000413574 FAM236CP0DP71 79 aa15.4■□□□□ 0.06
CSNK1E-206ENST00000413574 IMUPQ9GZP8 106 aa15.39■□□□□ 0.05
CSNK1E-206ENST00000413574 TRAV22A0A0B4J277 110 aa15.35■□□□□ 0.05
CSNK1E-206ENST00000413574 UQCRQO14949 82 aa15.35■□□□□ 0.05
CSNK1E-206ENST00000413574 OCR1Q9BZK8 76 aa15.32■□□□□ 0.04
CSNK1E-206ENST00000413574 H0Y9P7 68 aa15.27■□□□□ 0.03
CSNK1E-206ENST00000413574 SCGB1A1P11684 91 aa15.26■□□□□ 0.03
CSNK1E-206ENST00000413574 C4orf26Q17RF5 130 aa15.21■□□□□ 0.02
CSNK1E-206ENST00000413574 M0R2T5 61 aa15.2■□□□□ 0.02
CSNK1E-206ENST00000413574 CYP4F30PQ9H0H9 118 aa15.2■□□□□ 0.02
CSNK1E-206ENST00000413574 FAM236AA0A1B0GUQ0 79 aa15.19■□□□□ 0.02
CSNK1E-206ENST00000413574 FAM236BA0A1B0GV22 79 aa15.19■□□□□ 0.02
CSNK1E-206ENST00000413574 LOC101927531A0A1B0GV80 90 aa15.17■□□□□ 0.02
CSNK1E-206ENST00000413574 ATOX1O00244 68 aa15.17■□□□□ 0.02
CSNK1E-206ENST00000413574 C1orf64Q8NEQ6 169 aa15.1■□□□□ 0.01
CSNK1E-206ENST00000413574 LINC00208Q96KT6 92 aa15.1■□□□□ 0.01
CSNK1E-206ENST00000413574 MP68P56378 58 aa15.07■□□□□ 0
CSNK1E-206ENST00000413574 C5orf47Q569G3 176 aa15.07■□□□□ 0
CSNK1E-206ENST00000413574 H1FX-AS1Q4G0G2 97 aa15.03■□□□□ -0
CSNK1E-206ENST00000413574 KRTAP10-6P60371 365 aaPredicted RBP15.01□□□□□ -0.01
CSNK1E-206ENST00000413574 KRTAP3-1Q9BYR8 98 aa15□□□□□ -0.01
CSNK1E-206ENST00000413574 LORP23490 312 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-206ENST00000413574 TRAV7A0A075B6U4 112 aa14.95□□□□□ -0.02
CSNK1E-206ENST00000413574 SMIM20Q8N5G0 67 aa14.95□□□□□ -0.02
CSNK1E-206ENST00000413574 KLKP1Q107X0 134 aa14.94□□□□□ -0.02
CSNK1E-206ENST00000413574 H3BPC8 53 aa14.91□□□□□ -0.02
CSNK1E-206ENST00000413574 SERP2Q8N6R1 65 aa14.73□□□□□ -0.05
CSNK1E-206ENST00000413574 KRTAP9-8Q9BYQ0 159 aa14.72□□□□□ -0.05
CSNK1E-206ENST00000413574 S4R3F8 94 aa14.7□□□□□ -0.06
CSNK1E-206ENST00000413574 SNURFQ9Y675 71 aa14.66□□□□□ -0.06
CSNK1E-206ENST00000413574 LCA10Q71F78 164 aa14.65□□□□□ -0.06
CSNK1E-206ENST00000413574 C20orf197Q8N268 126 aa14.61□□□□□ -0.07
CSNK1E-206ENST00000413574 MT2AP02795 61 aa14.59□□□□□ -0.07
CSNK1E-206ENST00000413574 A8MUN3 132 aa14.57□□□□□ -0.08
CSNK1E-206ENST00000413574 KRTAP3-3Q9BYR6 98 aa14.52□□□□□ -0.08
CSNK1E-206ENST00000413574 MT1FP04733 61 aa14.49□□□□□ -0.09
CSNK1E-206ENST00000413574 COX7CP15954 63 aa14.48□□□□□ -0.09
CSNK1E-206ENST00000413574 KRTAP9-2Q9BYQ4 174 aa14.48□□□□□ -0.09
CSNK1E-206ENST00000413574 CSAG1Q6PB30 78 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms