RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 OCR1Q9BZK8 76 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 HERC1Q15751 4861 aa3.33□□□□□ -1.88
LINC00342-201ENST00000412393 PANO1I0J062 215 aa3.32□□□□□ -1.88
LINC00342-201ENST00000412393 COX7BP24311 80 aa3.32□□□□□ -1.88
LINC00342-201ENST00000412393 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
LINC00342-201ENST00000412393 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
LINC00342-201ENST00000412393 TMEM254Q8TBM7 123 aa3.32□□□□□ -1.88
LINC00342-201ENST00000412393 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
LINC00342-201ENST00000412393 BPY2O14599 106 aa3.31□□□□□ -1.88
LINC00342-201ENST00000412393 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
LINC00342-201ENST00000412393 IGLV5-48A0A075B6I7 105 aa3.3□□□□□ -1.88
LINC00342-201ENST00000412393 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
LINC00342-201ENST00000412393 NREPQ16612 68 aa3.3□□□□□ -1.88
LINC00342-201ENST00000412393 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
LINC00342-201ENST00000412393 LINC00474Q9P2X8 69 aa3.3□□□□□ -1.88
LINC00342-201ENST00000412393 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
LINC00342-201ENST00000412393 IGKV2-24A0A0C4DH68 120 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 UBE2AP49459 152 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 PRR3P79522 188 aaKnown RBP3.29□□□□□ -1.88
LINC00342-201ENST00000412393 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 Q8NDZ9 215 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 ZCCHC13Q8WW36 166 aaKnown RBP3.29□□□□□ -1.88
LINC00342-201ENST00000412393 CYP4F30PQ9H0H9 118 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
LINC00342-201ENST00000412393 A0A096LNI7 61 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 Q6ZQY7 126 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 C7orf33Q8WU49 177 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 SNURFQ9Y675 71 aa3.28□□□□□ -1.88
LINC00342-201ENST00000412393 hDV103S1A0JD37 113 aa3.27□□□□□ -1.89
LINC00342-201ENST00000412393 M0R378 163 aa3.27□□□□□ -1.89
LINC00342-201ENST00000412393 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
LINC00342-201ENST00000412393 CAMK2N2Q96S95 79 aa3.26□□□□□ -1.89
LINC00342-201ENST00000412393 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
LINC00342-201ENST00000412393 NDUFB1O75438 58 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 SPAG11BQ08648 103 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 FAM229BQ4G0N7 80 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 UNQ6190/PRO20217Q6UXQ8 127 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
LINC00342-201ENST00000412393 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
LINC00342-201ENST00000412393 C9orf116Q5BN46 136 aaPredicted RBP3.24□□□□□ -1.89
LINC00342-201ENST00000412393 C7orf65Q6ZTY9 151 aa3.24□□□□□ -1.89
LINC00342-201ENST00000412393 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
LINC00342-201ENST00000412393 A0A1W2PNN7 141 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 H3BPC8 53 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 MT1HL1P0DM35 61 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 Q6ZRP5 223 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 SPANXA2-OT1Q8N9U9 137 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 C6orf48Q9UBA6 75 aa3.23□□□□□ -1.89
LINC00342-201ENST00000412393 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 ETDCA0A1B0GVM5 59 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 LCA10Q71F78 164 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
LINC00342-201ENST00000412393 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.9
LINC00342-201ENST00000412393 SPRR1AP35321 89 aa3.21□□□□□ -1.9
LINC00342-201ENST00000412393 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
LINC00342-201ENST00000412393 SPINK6Q6UWN8 80 aa3.21□□□□□ -1.9
LINC00342-201ENST00000412393 Q8N377 158 aa3.21□□□□□ -1.9
LINC00342-201ENST00000412393 C1orf64Q8NEQ6 169 aa3.21□□□□□ -1.9
LINC00342-201ENST00000412393 TNXBP22105 4242 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 DSCR10P59022 87 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 Q8NBF4 154 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 HIGD2AQ9BW72 106 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
LINC00342-201ENST00000412393 A0A1W2PNM2 257 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 FAM168BA1KXE4 195 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 RPL37AP8A6NKH3 93 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 A6NN06 94 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 C8orf87E5RJ46 101 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 C1orf137Q5JT78 98 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 Q75L30 129 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 Q9BRP9 147 aa3.19□□□□□ -1.9
LINC00342-201ENST00000412393 A0A087X002 238 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 Q5VV11 94 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
LINC00342-201ENST00000412393 PSPHP1O15172 72 aa3.17□□□□□ -1.9
LINC00342-201ENST00000412393 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
LINC00342-201ENST00000412393 Q6ZRX8 168 aa3.17□□□□□ -1.9
LINC00342-201ENST00000412393 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
LINC00342-201ENST00000412393 KRTAP7-1Q8IUC3 87 aa3.17□□□□□ -1.9
LINC00342-201ENST00000412393 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
LINC00342-201ENST00000412393 CHKB-CPT1BH3BT56 60 aa3.16□□□□□ -1.9
LINC00342-201ENST00000412393 SMIM29Q86T20 159 aa3.16□□□□□ -1.9
LINC00342-201ENST00000412393 Q8N9L7 120 aa3.16□□□□□ -1.9
LINC00342-201ENST00000412393 XAGE1AQ9HD64 81 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms