RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 HIST3H2BBQ8N257 126 aa3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
CEACAM1-208ENST00000403461 TCL1BO95988 128 aa3.54□□□□□ -1.84
CEACAM1-208ENST00000403461 NPC2P61916 151 aa3.54□□□□□ -1.84
CEACAM1-208ENST00000403461 VAMP8Q9BV40 100 aa3.54□□□□□ -1.84
CEACAM1-208ENST00000403461 TEX49A0A1B0GTD5 131 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 IGKCP01834 107 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 COX7BP24311 80 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 ATP11AUNQ6ZP68 121 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 DEFB105AQ8NG35 78 aa3.53□□□□□ -1.84
CEACAM1-208ENST00000403461 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
CEACAM1-208ENST00000403461 CCDC179H3BU77 68 aa3.52□□□□□ -1.85
CEACAM1-208ENST00000403461 IFITM1P13164 125 aa3.52□□□□□ -1.85
CEACAM1-208ENST00000403461 USH2AO75445 5202 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 TRBV7-6A0A0J9YX20 115 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 SYS1-DBNDD2H3BUS1 97 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 LINC00313P59037 77 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 TMEM258P61165 79 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
CEACAM1-208ENST00000403461 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
CEACAM1-208ENST00000403461 KRTDAPP60985 99 aa3.5□□□□□ -1.85
CEACAM1-208ENST00000403461 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
CEACAM1-208ENST00000403461 CEND1Q8N111 149 aa3.5□□□□□ -1.85
CEACAM1-208ENST00000403461 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 F8WEM9 126 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 LST1O00453 97 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 C3orf79P0CE67 100 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 PCP2Q8IVA1 136 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 LINC00308Q8TCZ7 52 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 HIST1H2BLQ99880 126 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 NAA38Q9BRA0 125 aaKnown RBP3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 UQCR10Q9UDW1 63 aa3.49□□□□□ -1.85
CEACAM1-208ENST00000403461 A8MUN3 132 aa3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 UQCRQO14949 82 aa3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 LINC01545Q5VT33 79 aa3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 ATOH7Q8N100 152 aa3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 RAB37Q96AX2 223 aa3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
CEACAM1-208ENST00000403461 TIMM17BO60830 172 aa3.47□□□□□ -1.85
CEACAM1-208ENST00000403461 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
CEACAM1-208ENST00000403461 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
CEACAM1-208ENST00000403461 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
CEACAM1-208ENST00000403461 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
CEACAM1-208ENST00000403461 IGLV5-48A0A075B6I7 105 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 FAM236AA0A1B0GUQ0 79 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 FAM236BA0A1B0GV22 79 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 F8W1H4 67 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 K7EP34 96 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
CEACAM1-208ENST00000403461 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
CEACAM1-208ENST00000403461 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
CEACAM1-208ENST00000403461 LINC00846Q9NV44 126 aa3.45□□□□□ -1.86
CEACAM1-208ENST00000403461 A0A0G2JQZ4 141 aa3.44□□□□□ -1.86
CEACAM1-208ENST00000403461 H3BMG7 143 aa3.44□□□□□ -1.86
CEACAM1-208ENST00000403461 Q6JHZ5 121 aa3.44□□□□□ -1.86
CEACAM1-208ENST00000403461 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
CEACAM1-208ENST00000403461 TRBV7-7A0A0K0K1E9 115 aa3.43□□□□□ -1.86
CEACAM1-208ENST00000403461 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
CEACAM1-208ENST00000403461 CLEC2BQ92478 149 aa3.43□□□□□ -1.86
CEACAM1-208ENST00000403461 TRAV13-2A0A0B4J235 113 aa3.42□□□□□ -1.86
CEACAM1-208ENST00000403461 TRACP01848 142 aa3.42□□□□□ -1.86
CEACAM1-208ENST00000403461 LCA10Q71F78 164 aa3.42□□□□□ -1.86
CEACAM1-208ENST00000403461 Q96NJ1 140 aa3.42□□□□□ -1.86
CEACAM1-208ENST00000403461 MT-ATP8P03928 68 aa3.41□□□□□ -1.86
CEACAM1-208ENST00000403461 FABP2P12104 132 aa3.41□□□□□ -1.86
CEACAM1-208ENST00000403461 TEN1Q86WV5 123 aa3.41□□□□□ -1.86
CEACAM1-208ENST00000403461 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
CEACAM1-208ENST00000403461 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
CEACAM1-208ENST00000403461 IGFL1Q6UW32 110 aa3.4□□□□□ -1.87
CEACAM1-208ENST00000403461 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
CEACAM1-208ENST00000403461 A0A1B0GW54 56 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 H3BT86 120 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 SNCGO76070 127 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 MT2AP02795 61 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
CEACAM1-208ENST00000403461 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
CEACAM1-208ENST00000403461 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 COX7CP15954 63 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 Q6ZQY7 126 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 SMIM11BQ8TCY0 68 aa3.37□□□□□ -1.87
CEACAM1-208ENST00000403461 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
CEACAM1-208ENST00000403461 A8MUU9 505 aa3.36□□□□□ -1.87
CEACAM1-208ENST00000403461 BPY2O14599 106 aa3.36□□□□□ -1.87
CEACAM1-208ENST00000403461 MT1FP04733 61 aa3.36□□□□□ -1.87
CEACAM1-208ENST00000403461 LINC00575Q6W349 94 aa3.36□□□□□ -1.87
CEACAM1-208ENST00000403461 PPDPFLQ8WWR9 84 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms