RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 A8MUU9 505 aa4.15□□□□□ -1.75
TM9SF4-202ENST00000398022 C1orf137Q5JT78 98 aa4.15□□□□□ -1.75
TM9SF4-202ENST00000398022 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.75
TM9SF4-202ENST00000398022 COA5Q86WW8 74 aa4.14□□□□□ -1.75
TM9SF4-202ENST00000398022 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.14□□□□□ -1.75
TM9SF4-202ENST00000398022 M0R2N4 97 aa4.14□□□□□ -1.75
TM9SF4-202ENST00000398022 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
TM9SF4-202ENST00000398022 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
TM9SF4-202ENST00000398022 H3BNG1 76 aa4.12□□□□□ -1.75
TM9SF4-202ENST00000398022 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
TM9SF4-202ENST00000398022 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
TM9SF4-202ENST00000398022 WFDC10BQ8IUB3 73 aa4.11□□□□□ -1.75
TM9SF4-202ENST00000398022 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
TM9SF4-202ENST00000398022 DNAH11Q96DT5 4516 aa4.11□□□□□ -1.75
TM9SF4-202ENST00000398022 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
TM9SF4-202ENST00000398022 NUPR2A6NF83 97 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 KCNQ1DNQ9H478 68 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 RYR1P21817 5038 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 UQCR11O14957 56 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 C15orf56Q8N910 161 aa4.1□□□□□ -1.75
TM9SF4-202ENST00000398022 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
TM9SF4-202ENST00000398022 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
TM9SF4-202ENST00000398022 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.76
TM9SF4-202ENST00000398022 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
TM9SF4-202ENST00000398022 LINC01556Q5JQF7 62 aa4.08□□□□□ -1.76
TM9SF4-202ENST00000398022 Q8NBF4 154 aa4.08□□□□□ -1.76
TM9SF4-202ENST00000398022 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
TM9SF4-202ENST00000398022 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
TM9SF4-202ENST00000398022 IGLV5-48A0A075B6I7 105 aa4.06□□□□□ -1.76
TM9SF4-202ENST00000398022 ZNF861PO60384 105 aa4.06□□□□□ -1.76
TM9SF4-202ENST00000398022 HSPG2P98160 4391 aa4.06□□□□□ -1.76
TM9SF4-202ENST00000398022 DEFB131BA0A096LNP1 70 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 Q6ZRX8 168 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 Q8N377 158 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 PANO1I0J062 215 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 STAB2Q8WWQ8 2551 aa4.05□□□□□ -1.76
TM9SF4-202ENST00000398022 ST20-AS1Q8NBB2 130 aa4.04□□□□□ -1.76
TM9SF4-202ENST00000398022 Q5W150 140 aa4.03□□□□□ -1.76
TM9SF4-202ENST00000398022 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
TM9SF4-202ENST00000398022 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
TM9SF4-202ENST00000398022 DEFB116Q30KQ4 102 aa4.02□□□□□ -1.77
TM9SF4-202ENST00000398022 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
TM9SF4-202ENST00000398022 SPRR1AP35321 89 aa4□□□□□ -1.77
TM9SF4-202ENST00000398022 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
TM9SF4-202ENST00000398022 KRTAP10-11P60412 298 aa4□□□□□ -1.77
TM9SF4-202ENST00000398022 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
TM9SF4-202ENST00000398022 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
TM9SF4-202ENST00000398022 K7EIL1 84 aa3.99□□□□□ -1.77
TM9SF4-202ENST00000398022 PCOTHQ58A44 107 aa3.99□□□□□ -1.77
TM9SF4-202ENST00000398022 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
TM9SF4-202ENST00000398022 LY6G6CO95867 125 aa3.98□□□□□ -1.77
TM9SF4-202ENST00000398022 K7EQZ3 153 aa3.98□□□□□ -1.77
TM9SF4-202ENST00000398022 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
TM9SF4-202ENST00000398022 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
TM9SF4-202ENST00000398022 A0A1B0GU69 56 aa3.97□□□□□ -1.77
TM9SF4-202ENST00000398022 DSCR10P59022 87 aa3.97□□□□□ -1.77
TM9SF4-202ENST00000398022 LINC00472Q9H8W2 130 aa3.95□□□□□ -1.78
TM9SF4-202ENST00000398022 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
TM9SF4-202ENST00000398022 A0A087WTM6 91 aa3.95□□□□□ -1.78
TM9SF4-202ENST00000398022 HERC1Q15751 4861 aa3.94□□□□□ -1.78
TM9SF4-202ENST00000398022 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
TM9SF4-202ENST00000398022 IGFL1Q6UW32 110 aa3.94□□□□□ -1.78
TM9SF4-202ENST00000398022 C14orf177Q52M58 125 aa3.94□□□□□ -1.78
TM9SF4-202ENST00000398022 PRLHP81277 87 aa3.93□□□□□ -1.78
TM9SF4-202ENST00000398022 UBE2DNLQ8IWF7 75 aa3.93□□□□□ -1.78
TM9SF4-202ENST00000398022 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
TM9SF4-202ENST00000398022 KRTAP7-1Q8IUC3 87 aa3.92□□□□□ -1.78
TM9SF4-202ENST00000398022 IGLV7-43P04211 117 aa3.91□□□□□ -1.78
TM9SF4-202ENST00000398022 A0A096LNI7 61 aa3.91□□□□□ -1.78
TM9SF4-202ENST00000398022 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.78
TM9SF4-202ENST00000398022 A0A1B0GU33 70 aa3.9□□□□□ -1.79
TM9SF4-202ENST00000398022 Q8N1X5 172 aa3.9□□□□□ -1.79
TM9SF4-202ENST00000398022 A0A0G2JQZ4 141 aa3.89□□□□□ -1.79
TM9SF4-202ENST00000398022 A0A1W2PNN7 141 aa3.89□□□□□ -1.79
TM9SF4-202ENST00000398022 RPL37AP61513 92 aaKnown RBP3.89□□□□□ -1.79
TM9SF4-202ENST00000398022 HRES1P13985 223 aa3.88□□□□□ -1.79
TM9SF4-202ENST00000398022 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
TM9SF4-202ENST00000398022 NBDYA0A0U1RRE5 68 aa3.87□□□□□ -1.79
TM9SF4-202ENST00000398022 SPRR1BP22528 89 aa3.87□□□□□ -1.79
TM9SF4-202ENST00000398022 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
TM9SF4-202ENST00000398022 Q96NJ1 140 aa3.87□□□□□ -1.79
TM9SF4-202ENST00000398022 DNAH8Q96JB1 4490 aa3.86□□□□□ -1.79
TM9SF4-202ENST00000398022 ACYP2P14621 99 aa3.85□□□□□ -1.79
TM9SF4-202ENST00000398022 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.79
TM9SF4-202ENST00000398022 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
TM9SF4-202ENST00000398022 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
TM9SF4-202ENST00000398022 MMP24-AS1A0A0U1RRL7 71 aa3.81□□□□□ -1.8
TM9SF4-202ENST00000398022 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
TM9SF4-202ENST00000398022 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
TM9SF4-202ENST00000398022 APLNQ9ULZ1 77 aa3.79□□□□□ -1.8
TM9SF4-202ENST00000398022 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
TM9SF4-202ENST00000398022 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.81
TM9SF4-202ENST00000398022 KRTAP13-1Q8IUC0 172 aa3.77□□□□□ -1.81
TM9SF4-202ENST00000398022 MRPL34Q9BQ48 92 aaKnown RBP3.77□□□□□ -1.81
TM9SF4-202ENST00000398022 FAT1Q14517 4588 aa3.75□□□□□ -1.81
TM9SF4-202ENST00000398022 A0A1B0GVY2 172 aa3.75□□□□□ -1.81
TM9SF4-202ENST00000398022 SPACA4Q8TDM5 124 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms