RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
TSPAN4-205ENST00000397406 A8MWP4 228 aa9.47□□□□□ -0.89
TSPAN4-205ENST00000397406 MT-ATP8P03928 68 aa9.46□□□□□ -0.9
TSPAN4-205ENST00000397406 Q8N9L7 120 aa9.46□□□□□ -0.9
TSPAN4-205ENST00000397406 K7EQZ3 153 aa9.45□□□□□ -0.9
TSPAN4-205ENST00000397406 FP248Q71RG6 208 aaPredicted RBP9.43□□□□□ -0.9
TSPAN4-205ENST00000397406 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
TSPAN4-205ENST00000397406 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
TSPAN4-205ENST00000397406 NDUFB1O75438 58 aa9.42□□□□□ -0.9
TSPAN4-205ENST00000397406 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
TSPAN4-205ENST00000397406 HIST1H4AP62805 103 aaKnown RBP9.38□□□□□ -0.91
TSPAN4-205ENST00000397406 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
TSPAN4-205ENST00000397406 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
TSPAN4-205ENST00000397406 PRR4Q16378 134 aa9.36□□□□□ -0.91
TSPAN4-205ENST00000397406 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
TSPAN4-205ENST00000397406 A0A087WVE0 104 aa9.35□□□□□ -0.91
TSPAN4-205ENST00000397406 C8orf17Q9NRJ1 99 aa9.35□□□□□ -0.91
TSPAN4-205ENST00000397406 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
TSPAN4-205ENST00000397406 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
TSPAN4-205ENST00000397406 MUC2Q02817 5179 aa9.33□□□□□ -0.92
TSPAN4-205ENST00000397406 LINC00313P59037 77 aa9.31□□□□□ -0.92
TSPAN4-205ENST00000397406 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
TSPAN4-205ENST00000397406 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
TSPAN4-205ENST00000397406 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
TSPAN4-205ENST00000397406 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
TSPAN4-205ENST00000397406 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
TSPAN4-205ENST00000397406 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
TSPAN4-205ENST00000397406 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
TSPAN4-205ENST00000397406 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
TSPAN4-205ENST00000397406 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
TSPAN4-205ENST00000397406 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
TSPAN4-205ENST00000397406 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
TSPAN4-205ENST00000397406 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
TSPAN4-205ENST00000397406 XP32Q5T750 250 aa9.18□□□□□ -0.94
TSPAN4-205ENST00000397406 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
TSPAN4-205ENST00000397406 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
TSPAN4-205ENST00000397406 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
TSPAN4-205ENST00000397406 A8MUU9 505 aa9.15□□□□□ -0.94
TSPAN4-205ENST00000397406 Q75L30 129 aa9.12□□□□□ -0.95
TSPAN4-205ENST00000397406 NDUFS5O43920 106 aa9.11□□□□□ -0.95
TSPAN4-205ENST00000397406 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
TSPAN4-205ENST00000397406 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
TSPAN4-205ENST00000397406 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
TSPAN4-205ENST00000397406 ATOX1O00244 68 aa9.07□□□□□ -0.96
TSPAN4-205ENST00000397406 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
TSPAN4-205ENST00000397406 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
TSPAN4-205ENST00000397406 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
TSPAN4-205ENST00000397406 Q5W150 140 aa9.02□□□□□ -0.97
TSPAN4-205ENST00000397406 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.97
TSPAN4-205ENST00000397406 UQCRQO14949 82 aa9.01□□□□□ -0.97
TSPAN4-205ENST00000397406 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
TSPAN4-205ENST00000397406 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
TSPAN4-205ENST00000397406 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
TSPAN4-205ENST00000397406 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.98
TSPAN4-205ENST00000397406 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
TSPAN4-205ENST00000397406 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
TSPAN4-205ENST00000397406 PCOTHQ58A44 107 aa8.94□□□□□ -0.98
TSPAN4-205ENST00000397406 H0Y9P7 68 aa8.92□□□□□ -0.98
TSPAN4-205ENST00000397406 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
TSPAN4-205ENST00000397406 C5orf47Q569G3 176 aa8.92□□□□□ -0.98
TSPAN4-205ENST00000397406 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
TSPAN4-205ENST00000397406 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
TSPAN4-205ENST00000397406 COX7CP15954 63 aa8.88□□□□□ -0.99
TSPAN4-205ENST00000397406 MP68P56378 58 aa8.87□□□□□ -0.99
TSPAN4-205ENST00000397406 LINC00208Q96KT6 92 aa8.85□□□□□ -0.99
TSPAN4-205ENST00000397406 H3BPC8 53 aa8.84□□□□□ -0.99
TSPAN4-205ENST00000397406 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
TSPAN4-205ENST00000397406 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
TSPAN4-205ENST00000397406 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
TSPAN4-205ENST00000397406 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
TSPAN4-205ENST00000397406 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
TSPAN4-205ENST00000397406 SPINK7P58062 85 aa8.8□□□□□ -1
TSPAN4-205ENST00000397406 C20orf197Q8N268 126 aa8.8□□□□□ -1
TSPAN4-205ENST00000397406 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
TSPAN4-205ENST00000397406 CYP4F30PQ9H0H9 118 aa8.79□□□□□ -1
TSPAN4-205ENST00000397406 SNURFQ9Y675 71 aa8.77□□□□□ -1.01
TSPAN4-205ENST00000397406 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
TSPAN4-205ENST00000397406 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
TSPAN4-205ENST00000397406 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
TSPAN4-205ENST00000397406 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
TSPAN4-205ENST00000397406 HRES1P13985 223 aa8.7□□□□□ -1.02
TSPAN4-205ENST00000397406 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
TSPAN4-205ENST00000397406 PCP4P48539 62 aa8.68□□□□□ -1.02
TSPAN4-205ENST00000397406 MPLKIPQ8TAP9 179 aa8.63□□□□□ -1.03
TSPAN4-205ENST00000397406 NDUFC1O43677 76 aa8.61□□□□□ -1.03
TSPAN4-205ENST00000397406 H7BZZ5 65 aa8.6□□□□□ -1.03
TSPAN4-205ENST00000397406 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
TSPAN4-205ENST00000397406 MT1HP80294 61 aa8.55□□□□□ -1.04
TSPAN4-205ENST00000397406 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
TSPAN4-205ENST00000397406 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
TSPAN4-205ENST00000397406 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
TSPAN4-205ENST00000397406 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
TSPAN4-205ENST00000397406 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
TSPAN4-205ENST00000397406 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
TSPAN4-205ENST00000397406 DMAC1Q96GE9 116 aa8.46□□□□□ -1.05
TSPAN4-205ENST00000397406 FAM236DA0A1B0GTK5 79 aa8.46□□□□□ -1.06
TSPAN4-205ENST00000397406 FAM236CP0DP71 79 aa8.46□□□□□ -1.06
TSPAN4-205ENST00000397406 A8MUN3 132 aa8.44□□□□□ -1.06
TSPAN4-205ENST00000397406 TMEM258P61165 79 aa8.43□□□□□ -1.06
TSPAN4-205ENST00000397406 FLGP20930 4061 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms