RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 HIST2H2BEQ16778 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BHQ93079 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BNQ99877 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 HIST1H2BMQ99879 126 aa3.89□□□□□ -1.79
SCFD1-202ENST00000396629 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
SCFD1-202ENST00000396629 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
SCFD1-202ENST00000396629 ATOH7Q8N100 152 aa3.88□□□□□ -1.79
SCFD1-202ENST00000396629 KMT2DO14686 5537 aa3.88□□□□□ -1.79
SCFD1-202ENST00000396629 C8orf87E5RJ46 101 aa3.88□□□□□ -1.79
SCFD1-202ENST00000396629 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
SCFD1-202ENST00000396629 RAB37Q96AX2 223 aa3.87□□□□□ -1.79
SCFD1-202ENST00000396629 SNCGO76070 127 aa3.87□□□□□ -1.79
SCFD1-202ENST00000396629 MT1BP07438 61 aa3.87□□□□□ -1.79
SCFD1-202ENST00000396629 A0A1B0GVX0 72 aa3.85□□□□□ -1.79
SCFD1-202ENST00000396629 H0YGX0 51 aa3.85□□□□□ -1.79
SCFD1-202ENST00000396629 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
SCFD1-202ENST00000396629 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
SCFD1-202ENST00000396629 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
SCFD1-202ENST00000396629 FABP2P12104 132 aa3.83□□□□□ -1.8
SCFD1-202ENST00000396629 ANKRD29Q8N6D5 301 aa3.83□□□□□ -1.8
SCFD1-202ENST00000396629 COA6Q5JTJ3 125 aaKnown RBP3.83□□□□□ -1.8
SCFD1-202ENST00000396629 A0A1B0GX51 115 aa3.82□□□□□ -1.8
SCFD1-202ENST00000396629 Q5VV11 94 aa3.82□□□□□ -1.8
SCFD1-202ENST00000396629 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
SCFD1-202ENST00000396629 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
SCFD1-202ENST00000396629 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
SCFD1-202ENST00000396629 TRACP01848 142 aa3.79□□□□□ -1.8
SCFD1-202ENST00000396629 CCKP06307 115 aa3.79□□□□□ -1.8
SCFD1-202ENST00000396629 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
SCFD1-202ENST00000396629 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
SCFD1-202ENST00000396629 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SCFD1-202ENST00000396629 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SCFD1-202ENST00000396629 A0A0B4J2C4 111 aa3.77□□□□□ -1.81
SCFD1-202ENST00000396629 A0A1B0GV72 72 aa3.77□□□□□ -1.81
SCFD1-202ENST00000396629 IGKV3D-7A0A0C4DH55 119 aa3.76□□□□□ -1.81
SCFD1-202ENST00000396629 H3BQ85 93 aa3.76□□□□□ -1.81
SCFD1-202ENST00000396629 J3KT08 172 aa3.76□□□□□ -1.81
SCFD1-202ENST00000396629 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
SCFD1-202ENST00000396629 DSCR8Q96T75 97 aa3.76□□□□□ -1.81
SCFD1-202ENST00000396629 HSBP1L1C9JCN9 74 aa3.75□□□□□ -1.81
SCFD1-202ENST00000396629 SPRR2EP22531 72 aa3.75□□□□□ -1.81
SCFD1-202ENST00000396629 SPRR2BP35325 72 aa3.75□□□□□ -1.81
SCFD1-202ENST00000396629 SPRR2AP35326 72 aa3.75□□□□□ -1.81
SCFD1-202ENST00000396629 C8orf17Q9NRJ1 99 aa3.74□□□□□ -1.81
SCFD1-202ENST00000396629 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
SCFD1-202ENST00000396629 FAM236AA0A1B0GUQ0 79 aa3.73□□□□□ -1.81
SCFD1-202ENST00000396629 FAM236BA0A1B0GV22 79 aa3.73□□□□□ -1.81
SCFD1-202ENST00000396629 TMEM256-PLSCR3K7ERE1 68 aa3.73□□□□□ -1.81
SCFD1-202ENST00000396629 NDUFB1O75438 58 aa3.73□□□□□ -1.81
SCFD1-202ENST00000396629 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
SCFD1-202ENST00000396629 DLEU1O43261 78 aa3.71□□□□□ -1.82
SCFD1-202ENST00000396629 DNAL4O96015 105 aa3.71□□□□□ -1.82
SCFD1-202ENST00000396629 COX8AP10176 69 aa3.71□□□□□ -1.82
SCFD1-202ENST00000396629 Q6ZVQ6 151 aa3.71□□□□□ -1.82
SCFD1-202ENST00000396629 VPS25Q9BRG1 176 aa3.71□□□□□ -1.82
SCFD1-202ENST00000396629 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
SCFD1-202ENST00000396629 PRO1854Q9UHT4 67 aa3.7□□□□□ -1.82
SCFD1-202ENST00000396629 C5orf47Q569G3 176 aa3.68□□□□□ -1.82
SCFD1-202ENST00000396629 Q6ZQT0 140 aa3.68□□□□□ -1.82
SCFD1-202ENST00000396629 C2orf91Q6ZV80 131 aa3.68□□□□□ -1.82
SCFD1-202ENST00000396629 HIGD1BQ9P298 99 aa3.68□□□□□ -1.82
SCFD1-202ENST00000396629 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
SCFD1-202ENST00000396629 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SCFD1-202ENST00000396629 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
SCFD1-202ENST00000396629 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
SCFD1-202ENST00000396629 IMUPQ9GZP8 106 aa3.66□□□□□ -1.82
SCFD1-202ENST00000396629 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
SCFD1-202ENST00000396629 MRPL34Q9BQ48 92 aaKnown RBP3.66□□□□□ -1.82
SCFD1-202ENST00000396629 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.82
SCFD1-202ENST00000396629 IGKV2-30P06310 120 aa3.65□□□□□ -1.82
SCFD1-202ENST00000396629 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.82
SCFD1-202ENST00000396629 CEND1Q8N111 149 aa3.65□□□□□ -1.82
SCFD1-202ENST00000396629 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
SCFD1-202ENST00000396629 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
SCFD1-202ENST00000396629 PRR15Q8IV56 129 aa3.64□□□□□ -1.83
SCFD1-202ENST00000396629 C4orf26Q17RF5 130 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 C14orf144Q96I85 54 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 C9JAW5 83 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 SPRR2DP22532 72 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 S100A2P29034 98 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 FXYD2P54710 66 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 CSAG1Q6PB30 78 aa3.63□□□□□ -1.83
SCFD1-202ENST00000396629 PSMB2P49721 201 aa3.62□□□□□ -1.83
SCFD1-202ENST00000396629 Q5W150 140 aa3.62□□□□□ -1.83
SCFD1-202ENST00000396629 S4R3F8 94 aa3.61□□□□□ -1.83
SCFD1-202ENST00000396629 A0A1B0GW54 56 aa3.61□□□□□ -1.83
SCFD1-202ENST00000396629 COX6CP09669 75 aa3.61□□□□□ -1.83
SCFD1-202ENST00000396629 NDUFS5O43920 106 aa3.6□□□□□ -1.83
SCFD1-202ENST00000396629 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
SCFD1-202ENST00000396629 hDV103S1A0JD37 113 aa3.6□□□□□ -1.83
SCFD1-202ENST00000396629 LCA10Q71F78 164 aa3.59□□□□□ -1.83
SCFD1-202ENST00000396629 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
SCFD1-202ENST00000396629 SPATA45Q537H7 98 aa3.58□□□□□ -1.84
SCFD1-202ENST00000396629 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
SCFD1-202ENST00000396629 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
SCFD1-202ENST00000396629 PAM16Q9Y3D7 125 aa3.56□□□□□ -1.84
SCFD1-202ENST00000396629 LOC110117498A0A087WWA1 95 aa3.56□□□□□ -1.84
SCFD1-202ENST00000396629 K7ERJ3 54 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms