RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 UBE2DNLQ8IWF7 75 aa1.96□□□□□ -2.1
XRCC4-203ENST00000396027 DCHS1Q96JQ0 3298 aa1.96□□□□□ -2.1
XRCC4-203ENST00000396027 SPG11Q96JI7 2443 aa1.96□□□□□ -2.1
XRCC4-203ENST00000396027 MAPK1IP1LQ8NDC0 245 aa1.95□□□□□ -2.1
XRCC4-203ENST00000396027 MAP1AP78559 2803 aaPredicted RBP1.95□□□□□ -2.1
XRCC4-203ENST00000396027 IGF2RP11717 2491 aa1.95□□□□□ -2.1
XRCC4-203ENST00000396027 TLN1Q9Y490 2541 aaKnown RBP1.95□□□□□ -2.1
XRCC4-203ENST00000396027 RELNP78509 3460 aa1.94□□□□□ -2.1
XRCC4-203ENST00000396027 VPS13CQ709C8 3753 aa1.94□□□□□ -2.1
XRCC4-203ENST00000396027 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
XRCC4-203ENST00000396027 SPTBN4Q9H254 2564 aa1.94□□□□□ -2.1
XRCC4-203ENST00000396027 RIF1Q5UIP0 2472 aaKnown RBP1.93□□□□□ -2.1
XRCC4-203ENST00000396027 Q6ZRN7 208 aaPredicted RBP1.93□□□□□ -2.1
XRCC4-203ENST00000396027 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
XRCC4-203ENST00000396027 ABCA2Q9BZC7 2435 aa1.93□□□□□ -2.1
XRCC4-203ENST00000396027 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
XRCC4-203ENST00000396027 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
XRCC4-203ENST00000396027 CEP295Q9C0D2 2601 aa1.92□□□□□ -2.1
XRCC4-203ENST00000396027 ASH1LQ9NR48 2969 aaKnown RBP1.92□□□□□ -2.1
XRCC4-203ENST00000396027 ATRXP46100 2492 aa1.92□□□□□ -2.1
XRCC4-203ENST00000396027 NBASA2RRP1 2371 aa1.92□□□□□ -2.1
XRCC4-203ENST00000396027 KRTAP7-1Q8IUC3 87 aa1.91□□□□□ -2.1
XRCC4-203ENST00000396027 MUC6Q6W4X9 2439 aa1.91□□□□□ -2.1
XRCC4-203ENST00000396027 ITPR1Q14643 2758 aa1.91□□□□□ -2.1
XRCC4-203ENST00000396027 NCOR2Q9Y618 2525 aa1.9□□□□□ -2.1
XRCC4-203ENST00000396027 M0QZ58 72 aa1.9□□□□□ -2.11
XRCC4-203ENST00000396027 SPINK1P00995 79 aa1.9□□□□□ -2.11
XRCC4-203ENST00000396027 RPS29P62273 56 aaKnown RBP1.9□□□□□ -2.11
XRCC4-203ENST00000396027 R4GN34 69 aa1.9□□□□□ -2.11
XRCC4-203ENST00000396027 CELSR1Q9NYQ6 3014 aa1.9□□□□□ -2.11
XRCC4-203ENST00000396027 AKAP9Q99996 3911 aa1.9□□□□□ -2.11
XRCC4-203ENST00000396027 HIVEP2P31629 2446 aa1.89□□□□□ -2.11
XRCC4-203ENST00000396027 UBR5O95071 2799 aaPredicted RBP1.89□□□□□ -2.11
XRCC4-203ENST00000396027 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
XRCC4-203ENST00000396027 HTN3P15516 51 aa1.89□□□□□ -2.11
XRCC4-203ENST00000396027 NBPF19A0A087WUL8 3843 aa1.89□□□□□ -2.11
XRCC4-203ENST00000396027 HIVEP3Q5T1R4 2406 aa1.89□□□□□ -2.11
XRCC4-203ENST00000396027 A0A096LNI7 61 aa1.88□□□□□ -2.11
XRCC4-203ENST00000396027 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
XRCC4-203ENST00000396027 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
XRCC4-203ENST00000396027 NAV2Q8IVL1 2488 aa1.88□□□□□ -2.11
XRCC4-203ENST00000396027 KRTAP12-2P59991 146 aa1.87□□□□□ -2.11
XRCC4-203ENST00000396027 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
XRCC4-203ENST00000396027 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
XRCC4-203ENST00000396027 S4R3F8 94 aa1.87□□□□□ -2.11
XRCC4-203ENST00000396027 TLN2Q9Y4G6 2542 aa1.87□□□□□ -2.11
XRCC4-203ENST00000396027 TYMSOSQ8TAI1 123 aa1.86□□□□□ -2.11
XRCC4-203ENST00000396027 FBN2P35556 2912 aa1.86□□□□□ -2.11
XRCC4-203ENST00000396027 SONP18583 2426 aaKnown RBP1.86□□□□□ -2.11
XRCC4-203ENST00000396027 COL12A1Q99715 3063 aa1.86□□□□□ -2.11
XRCC4-203ENST00000396027 CHD6Q8TD26 2715 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 DOPEY1Q5JWR5 2465 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 CELSR2Q9HCU4 2923 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 CFAP46Q8IYW2 2715 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 ZNF462Q96JM2 2506 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 MXRA5Q9NR99 2828 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 APLNQ9ULZ1 77 aa1.85□□□□□ -2.11
XRCC4-203ENST00000396027 ANK3Q12955 4377 aaKnown RBP1.84□□□□□ -2.11
XRCC4-203ENST00000396027 DEFB4AO15263 64 aa1.84□□□□□ -2.11
XRCC4-203ENST00000396027 FAM208BQ5VWN6 2430 aa1.84□□□□□ -2.12
XRCC4-203ENST00000396027 UTP20O75691 2785 aaKnown RBP1.84□□□□□ -2.12
XRCC4-203ENST00000396027 USP9XQ93008 2570 aaPredicted RBP1.83□□□□□ -2.12
XRCC4-203ENST00000396027 F8P00451 2351 aa1.83□□□□□ -2.12
XRCC4-203ENST00000396027 CRYBG3Q68DQ2 2970 aa1.83□□□□□ -2.12
XRCC4-203ENST00000396027 FLNCQ14315 2725 aa1.83□□□□□ -2.12
XRCC4-203ENST00000396027 ZANQ9Y493 2812 aa1.83□□□□□ -2.12
XRCC4-203ENST00000396027 USP9YO00507 2555 aaPredicted RBP1.83□□□□□ -2.12
XRCC4-203ENST00000396027 CHD8Q9HCK8 2581 aa1.83□□□□□ -2.12
XRCC4-203ENST00000396027 MYO9AB2RTY4 2548 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 SPACA4Q8TDM5 124 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 OTOGQ6ZRI0 2925 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 PKD1L2Q7Z442 2459 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 TEX15Q9BXT5 2789 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 IGSF10Q6WRI0 2623 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 CSMD2Q7Z408 3487 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 POLQO75417 2590 aa1.82□□□□□ -2.12
XRCC4-203ENST00000396027 ZNF469Q96JG9 3925 aaPredicted RBP1.82□□□□□ -2.12
XRCC4-203ENST00000396027 CUBNO60494 3623 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 APCP25054 2843 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 PIEZO1Q92508 2521 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 Q5VSD8 79 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 SMR3AQ99954 134 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
XRCC4-203ENST00000396027 SETXQ7Z333 2677 aaKnown RBP1.81□□□□□ -2.12
XRCC4-203ENST00000396027 NIPBLQ6KC79 2804 aaeCLIP1.8□□□□□ -2.12
XRCC4-203ENST00000396027 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
XRCC4-203ENST00000396027 EPG5Q9HCE0 2579 aa1.79□□□□□ -2.12
XRCC4-203ENST00000396027 CACNA1AO00555 2505 aa1.79□□□□□ -2.12
XRCC4-203ENST00000396027 PDZD2O15018 2839 aa1.78□□□□□ -2.12
XRCC4-203ENST00000396027 CENPEQ02224 2701 aa1.78□□□□□ -2.12
XRCC4-203ENST00000396027 PTPN13Q12923 2485 aa1.78□□□□□ -2.12
XRCC4-203ENST00000396027 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
XRCC4-203ENST00000396027 NF1P21359 2839 aa1.78□□□□□ -2.12
XRCC4-203ENST00000396027 ZFYVE26Q68DK2 2539 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 A0A0D9SG42 100 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 MYO18BQ8IUG5 2567 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 ACACBO00763 2458 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 ITPR3Q14573 2671 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 JMJD1CQ15652 2540 aa1.77□□□□□ -2.13
XRCC4-203ENST00000396027 ABCA12Q86UK0 2595 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms