RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
SNRPA1-202ENST00000394082 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
SNRPA1-202ENST00000394082 FAM236DA0A1B0GTK5 79 aa8.73□□□□□ -1.01
SNRPA1-202ENST00000394082 FAM236CP0DP71 79 aa8.73□□□□□ -1.01
SNRPA1-202ENST00000394082 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
SNRPA1-202ENST00000394082 BAALC-AS2P0C853 105 aa8.71□□□□□ -1.02
SNRPA1-202ENST00000394082 HRES1P13985 223 aa8.71□□□□□ -1.02
SNRPA1-202ENST00000394082 FCGBPQ9Y6R7 5405 aaPredicted RBP8.7□□□□□ -1.02
SNRPA1-202ENST00000394082 MT1FP04733 61 aa8.69□□□□□ -1.02
SNRPA1-202ENST00000394082 CCKP06307 115 aa8.69□□□□□ -1.02
SNRPA1-202ENST00000394082 RBM3P98179 157 aaKnown RBP8.69□□□□□ -1.02
SNRPA1-202ENST00000394082 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
SNRPA1-202ENST00000394082 LCE2BO14633 110 aa8.68□□□□□ -1.02
SNRPA1-202ENST00000394082 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
SNRPA1-202ENST00000394082 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
SNRPA1-202ENST00000394082 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
SNRPA1-202ENST00000394082 VPS25Q9BRG1 176 aa8.65□□□□□ -1.02
SNRPA1-202ENST00000394082 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
SNRPA1-202ENST00000394082 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
SNRPA1-202ENST00000394082 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
SNRPA1-202ENST00000394082 C9JAW5 83 aa8.62□□□□□ -1.03
SNRPA1-202ENST00000394082 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
SNRPA1-202ENST00000394082 MTURNQ8N3F0 131 aa8.61□□□□□ -1.03
SNRPA1-202ENST00000394082 IGHV6-1A0A0B4J1U7 121 aa8.6□□□□□ -1.03
SNRPA1-202ENST00000394082 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
SNRPA1-202ENST00000394082 TAX1BP3O14907 124 aa8.59□□□□□ -1.03
SNRPA1-202ENST00000394082 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
SNRPA1-202ENST00000394082 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
SNRPA1-202ENST00000394082 A0A1W2PPM0 123 aa8.58□□□□□ -1.04
SNRPA1-202ENST00000394082 A0A1B0GVX0 72 aa8.56□□□□□ -1.04
SNRPA1-202ENST00000394082 PDE6GP18545 87 aa8.55□□□□□ -1.04
SNRPA1-202ENST00000394082 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-202ENST00000394082 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
SNRPA1-202ENST00000394082 Q6ZQT0 140 aa8.53□□□□□ -1.04
SNRPA1-202ENST00000394082 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-202ENST00000394082 H3BT86 120 aa8.52□□□□□ -1.05
SNRPA1-202ENST00000394082 COL5A1-AS1Q5SY13 56 aa8.52□□□□□ -1.05
SNRPA1-202ENST00000394082 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.05
SNRPA1-202ENST00000394082 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
SNRPA1-202ENST00000394082 J3KT08 172 aa8.51□□□□□ -1.05
SNRPA1-202ENST00000394082 SPINK7P58062 85 aa8.51□□□□□ -1.05
SNRPA1-202ENST00000394082 A0A1B0GW54 56 aa8.5□□□□□ -1.05
SNRPA1-202ENST00000394082 SPCS1Q9Y6A9 102 aa8.5□□□□□ -1.05
SNRPA1-202ENST00000394082 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
SNRPA1-202ENST00000394082 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
SNRPA1-202ENST00000394082 A8MWP4 228 aa8.45□□□□□ -1.06
SNRPA1-202ENST00000394082 PCP4L1A6NKN8 68 aa8.43□□□□□ -1.06
SNRPA1-202ENST00000394082 SYNE2Q8WXH0 6885 aaKnown RBP8.43□□□□□ -1.06
SNRPA1-202ENST00000394082 NDUFB1O75438 58 aa8.42□□□□□ -1.06
SNRPA1-202ENST00000394082 NREPQ16612 68 aa8.39□□□□□ -1.07
SNRPA1-202ENST00000394082 WFDC13Q8IUB5 93 aa8.38□□□□□ -1.07
SNRPA1-202ENST00000394082 K7EP34 96 aa8.37□□□□□ -1.07
SNRPA1-202ENST00000394082 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
SNRPA1-202ENST00000394082 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
SNRPA1-202ENST00000394082 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
SNRPA1-202ENST00000394082 IGKV3D-7A0A0C4DH55 119 aa8.3□□□□□ -1.08
SNRPA1-202ENST00000394082 Q6ZVQ6 151 aa8.3□□□□□ -1.08
SNRPA1-202ENST00000394082 PRO0461Q9UI25 63 aa8.3□□□□□ -1.08
SNRPA1-202ENST00000394082 PRR15Q8IV56 129 aa8.28□□□□□ -1.08
SNRPA1-202ENST00000394082 BPY2O14599 106 aa8.26□□□□□ -1.09
SNRPA1-202ENST00000394082 H1FX-AS1Q4G0G2 97 aa8.25□□□□□ -1.09
SNRPA1-202ENST00000394082 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
SNRPA1-202ENST00000394082 F8W1H4 67 aa8.23□□□□□ -1.09
SNRPA1-202ENST00000394082 K7EQZ3 153 aa8.22□□□□□ -1.09
SNRPA1-202ENST00000394082 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
SNRPA1-202ENST00000394082 MRPL34Q9BQ48 92 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-202ENST00000394082 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
SNRPA1-202ENST00000394082 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
SNRPA1-202ENST00000394082 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
SNRPA1-202ENST00000394082 ETDBQ3ZM63 59 aa8.16□□□□□ -1.1
SNRPA1-202ENST00000394082 NDUFS5O43920 106 aa8.14□□□□□ -1.11
SNRPA1-202ENST00000394082 Q8N9L7 120 aa8.13□□□□□ -1.11
SNRPA1-202ENST00000394082 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SNRPA1-202ENST00000394082 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
SNRPA1-202ENST00000394082 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
SNRPA1-202ENST00000394082 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
SNRPA1-202ENST00000394082 Q5W150 140 aa8.04□□□□□ -1.12
SNRPA1-202ENST00000394082 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
SNRPA1-202ENST00000394082 CXCL6P80162 114 aa8.02□□□□□ -1.13
SNRPA1-202ENST00000394082 ACYP1P07311 99 aa8□□□□□ -1.13
SNRPA1-202ENST00000394082 FAM240AA0A1B0GVK7 77 aa7.96□□□□□ -1.14
SNRPA1-202ENST00000394082 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
SNRPA1-202ENST00000394082 A0A1B0GV90 55 aa7.95□□□□□ -1.14
SNRPA1-202ENST00000394082 NEBP20929 6669 aa7.95□□□□□ -1.14
SNRPA1-202ENST00000394082 A6NN06 94 aa7.93□□□□□ -1.14
SNRPA1-202ENST00000394082 MT1BP07438 61 aa7.92□□□□□ -1.14
SNRPA1-202ENST00000394082 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
SNRPA1-202ENST00000394082 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 C5orf47Q569G3 176 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 Q5VV11 94 aa7.9□□□□□ -1.14
SNRPA1-202ENST00000394082 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
SNRPA1-202ENST00000394082 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
SNRPA1-202ENST00000394082 CSAG1Q6PB30 78 aa7.87□□□□□ -1.15
SNRPA1-202ENST00000394082 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
SNRPA1-202ENST00000394082 S4R3F8 94 aa7.85□□□□□ -1.15
SNRPA1-202ENST00000394082 HIST1H4AP62805 103 aaKnown RBP7.84□□□□□ -1.15
SNRPA1-202ENST00000394082 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms