RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
VLDLR-201ENST00000382096 UBE2V1Q13404 147 aa11.34□□□□□ -0.59
VLDLR-201ENST00000382096 DEFB116Q30KQ4 102 aa11.32□□□□□ -0.6
VLDLR-201ENST00000382096 NAA38Q9BRA0 125 aaKnown RBP11.32□□□□□ -0.6
VLDLR-201ENST00000382096 KRTAP9-3Q9BYQ3 159 aa11.32□□□□□ -0.6
VLDLR-201ENST00000382096 HRES1P13985 223 aa11.31□□□□□ -0.6
VLDLR-201ENST00000382096 IGHV6-1A0A0B4J1U7 121 aa11.28□□□□□ -0.6
VLDLR-201ENST00000382096 MACF1Q9UPN3 7388 aaKnown RBP11.28□□□□□ -0.6
VLDLR-201ENST00000382096 FAM236DA0A1B0GTK5 79 aa11.27□□□□□ -0.61
VLDLR-201ENST00000382096 FAM236CP0DP71 79 aa11.27□□□□□ -0.61
VLDLR-201ENST00000382096 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
VLDLR-201ENST00000382096 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
VLDLR-201ENST00000382096 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
VLDLR-201ENST00000382096 KRTAP10-10P60014 251 aa11.25□□□□□ -0.61
VLDLR-201ENST00000382096 C8orf87E5RJ46 101 aa11.24□□□□□ -0.61
VLDLR-201ENST00000382096 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
VLDLR-201ENST00000382096 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
VLDLR-201ENST00000382096 SYNE2Q8WXH0 6885 aaKnown RBP11.2□□□□□ -0.62
VLDLR-201ENST00000382096 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
VLDLR-201ENST00000382096 DSCR8Q96T75 97 aa11.18□□□□□ -0.62
VLDLR-201ENST00000382096 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
VLDLR-201ENST00000382096 BATFQ16520 125 aa11.16□□□□□ -0.62
VLDLR-201ENST00000382096 C21orf62-AS1Q17RA5 79 aa11.16□□□□□ -0.62
VLDLR-201ENST00000382096 J3KT08 172 aa11.15□□□□□ -0.62
VLDLR-201ENST00000382096 ZCCHC13Q8WW36 166 aaKnown RBP11.13□□□□□ -0.63
VLDLR-201ENST00000382096 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
VLDLR-201ENST00000382096 C9JAW5 83 aa11.11□□□□□ -0.63
VLDLR-201ENST00000382096 Q6ZQT0 140 aa11.11□□□□□ -0.63
VLDLR-201ENST00000382096 LINC00846Q9NV44 126 aa11.11□□□□□ -0.63
VLDLR-201ENST00000382096 KRTAP19-6Q3LI70 58 aa11.09□□□□□ -0.63
VLDLR-201ENST00000382096 C9orf118A6NHY6 69 aa11.08□□□□□ -0.64
VLDLR-201ENST00000382096 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
VLDLR-201ENST00000382096 Q8N9P0 234 aaPredicted RBP11.08□□□□□ -0.64
VLDLR-201ENST00000382096 SPINK7P58062 85 aa11.06□□□□□ -0.64
VLDLR-201ENST00000382096 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
VLDLR-201ENST00000382096 LYRM7Q5U5X0 104 aa11.04□□□□□ -0.64
VLDLR-201ENST00000382096 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
VLDLR-201ENST00000382096 NDUFB1O75438 58 aa11.03□□□□□ -0.64
VLDLR-201ENST00000382096 A0A1B0GW54 56 aa11.02□□□□□ -0.65
VLDLR-201ENST00000382096 A0A1W2PPM0 123 aa11.02□□□□□ -0.65
VLDLR-201ENST00000382096 A8MWP4 228 aa10.99□□□□□ -0.65
VLDLR-201ENST00000382096 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
VLDLR-201ENST00000382096 C8orf17Q9NRJ1 99 aa10.98□□□□□ -0.65
VLDLR-201ENST00000382096 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
VLDLR-201ENST00000382096 PDE6GP18545 87 aa10.95□□□□□ -0.66
VLDLR-201ENST00000382096 H3BT86 120 aa10.91□□□□□ -0.66
VLDLR-201ENST00000382096 WFDC13Q8IUB5 93 aa10.9□□□□□ -0.66
VLDLR-201ENST00000382096 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
VLDLR-201ENST00000382096 KRTAP6-3Q3LI67 103 aa10.89□□□□□ -0.67
VLDLR-201ENST00000382096 Q6ZVQ6 151 aa10.89□□□□□ -0.67
VLDLR-201ENST00000382096 PRR15Q8IV56 129 aa10.87□□□□□ -0.67
VLDLR-201ENST00000382096 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
VLDLR-201ENST00000382096 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
VLDLR-201ENST00000382096 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
VLDLR-201ENST00000382096 NREPQ16612 68 aa10.81□□□□□ -0.68
VLDLR-201ENST00000382096 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
VLDLR-201ENST00000382096 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
VLDLR-201ENST00000382096 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
VLDLR-201ENST00000382096 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
VLDLR-201ENST00000382096 K7EP34 96 aa10.72□□□□□ -0.69
VLDLR-201ENST00000382096 hDV103S1A0JD37 113 aa10.71□□□□□ -0.69
VLDLR-201ENST00000382096 K7EQZ3 153 aa10.7□□□□□ -0.7
VLDLR-201ENST00000382096 H1FX-AS1Q4G0G2 97 aa10.7□□□□□ -0.7
VLDLR-201ENST00000382096 NDUFS5O43920 106 aa10.63□□□□□ -0.71
VLDLR-201ENST00000382096 Q5W150 140 aa10.6□□□□□ -0.71
VLDLR-201ENST00000382096 BPY2O14599 106 aa10.59□□□□□ -0.71
VLDLR-201ENST00000382096 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
VLDLR-201ENST00000382096 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
VLDLR-201ENST00000382096 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
VLDLR-201ENST00000382096 NEBP20929 6669 aa10.55□□□□□ -0.72
VLDLR-201ENST00000382096 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
VLDLR-201ENST00000382096 Q8N9L7 120 aa10.54□□□□□ -0.72
VLDLR-201ENST00000382096 F8W1H4 67 aa10.5□□□□□ -0.73
VLDLR-201ENST00000382096 CASC2Q6XLA1 102 aa10.49□□□□□ -0.73
VLDLR-201ENST00000382096 MUC12Q9UKN1 5478 aa10.48□□□□□ -0.73
VLDLR-201ENST00000382096 ETDBQ3ZM63 59 aa10.47□□□□□ -0.73
VLDLR-201ENST00000382096 HCG22E2RYF7 251 aa10.46□□□□□ -0.73
VLDLR-201ENST00000382096 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
VLDLR-201ENST00000382096 CXCL6P80162 114 aa10.43□□□□□ -0.74
VLDLR-201ENST00000382096 C4orf26Q17RF5 130 aa10.43□□□□□ -0.74
VLDLR-201ENST00000382096 A0A1B0GV90 55 aa10.38□□□□□ -0.75
VLDLR-201ENST00000382096 A6NN06 94 aa10.35□□□□□ -0.75
VLDLR-201ENST00000382096 KRTAP20-1Q3LI63 56 aa10.34□□□□□ -0.75
VLDLR-201ENST00000382096 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
VLDLR-201ENST00000382096 C5orf47Q569G3 176 aa10.3□□□□□ -0.76
VLDLR-201ENST00000382096 MT1BP07438 61 aa10.27□□□□□ -0.77
VLDLR-201ENST00000382096 S4R3F8 94 aa10.25□□□□□ -0.77
VLDLR-201ENST00000382096 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
VLDLR-201ENST00000382096 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
VLDLR-201ENST00000382096 C1orf64Q8NEQ6 169 aa10.22□□□□□ -0.77
VLDLR-201ENST00000382096 Q5VV11 94 aa10.21□□□□□ -0.77
VLDLR-201ENST00000382096 CSAG1Q6PB30 78 aa10.21□□□□□ -0.77
VLDLR-201ENST00000382096 KRTAP5-9P26371 169 aa10.2□□□□□ -0.78
VLDLR-201ENST00000382096 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
VLDLR-201ENST00000382096 LCA10Q71F78 164 aa10.19□□□□□ -0.78
VLDLR-201ENST00000382096 KRTAP19-8Q3LI54 63 aa10.18□□□□□ -0.78
VLDLR-201ENST00000382096 ACYP1P07311 99 aa10.17□□□□□ -0.78
VLDLR-201ENST00000382096 TP53AIP1Q9HCN2 124 aa10.17□□□□□ -0.78
VLDLR-201ENST00000382096 KRTAP10-5P60370 271 aa10.16□□□□□ -0.78
VLDLR-201ENST00000382096 FAM240AA0A1B0GVK7 77 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms