RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 JMJD7-PLA2G4BH0Y9G9 81 aa8.25□□□□□ -1.09
VCX3A-201ENST00000381089 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
VCX3A-201ENST00000381089 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
VCX3A-201ENST00000381089 CCKP06307 115 aa8.24□□□□□ -1.09
VCX3A-201ENST00000381089 USH2AO75445 5202 aa8.23□□□□□ -1.09
VCX3A-201ENST00000381089 A0A087WSZ3 146 aa8.23□□□□□ -1.09
VCX3A-201ENST00000381089 A0A1B0GV90 55 aa8.23□□□□□ -1.09
VCX3A-201ENST00000381089 Q96NJ1 140 aa8.23□□□□□ -1.09
VCX3A-201ENST00000381089 SSPOA2VEC9 5147 aa8.23□□□□□ -1.09
VCX3A-201ENST00000381089 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
VCX3A-201ENST00000381089 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
VCX3A-201ENST00000381089 Q6ZQT0 140 aa8.19□□□□□ -1.1
VCX3A-201ENST00000381089 SS18L2Q9UHA2 77 aa8.18□□□□□ -1.1
VCX3A-201ENST00000381089 F8W1H4 67 aa8.16□□□□□ -1.1
VCX3A-201ENST00000381089 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
VCX3A-201ENST00000381089 PDE6GP18545 87 aa8.15□□□□□ -1.1
VCX3A-201ENST00000381089 A8MUU9 505 aa8.13□□□□□ -1.11
VCX3A-201ENST00000381089 ETDBQ3ZM63 59 aa8.12□□□□□ -1.11
VCX3A-201ENST00000381089 FAM236DA0A1B0GTK5 79 aa8.11□□□□□ -1.11
VCX3A-201ENST00000381089 FAM236CP0DP71 79 aa8.11□□□□□ -1.11
VCX3A-201ENST00000381089 FCGBPQ9Y6R7 5405 aaPredicted RBP8.09□□□□□ -1.11
VCX3A-201ENST00000381089 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
VCX3A-201ENST00000381089 SIGMAR1Q99720 223 aa8.08□□□□□ -1.12
VCX3A-201ENST00000381089 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
VCX3A-201ENST00000381089 MT2AP02795 61 aa8.06□□□□□ -1.12
VCX3A-201ENST00000381089 IGKV4-1P06312 121 aa8.05□□□□□ -1.12
VCX3A-201ENST00000381089 A0A1B0GW54 56 aa8.04□□□□□ -1.12
VCX3A-201ENST00000381089 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
VCX3A-201ENST00000381089 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
VCX3A-201ENST00000381089 KRTAP19-1Q8IUB9 90 aa8.03□□□□□ -1.12
VCX3A-201ENST00000381089 DSCR10P59022 87 aa8.02□□□□□ -1.13
VCX3A-201ENST00000381089 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
VCX3A-201ENST00000381089 NREPQ16612 68 aa8.01□□□□□ -1.13
VCX3A-201ENST00000381089 LCE2BO14633 110 aa7.99□□□□□ -1.13
VCX3A-201ENST00000381089 MT1FP04733 61 aa7.99□□□□□ -1.13
VCX3A-201ENST00000381089 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
VCX3A-201ENST00000381089 LINC00313P59037 77 aa7.98□□□□□ -1.13
VCX3A-201ENST00000381089 J3KT08 172 aa7.96□□□□□ -1.14
VCX3A-201ENST00000381089 Q6ZVQ6 151 aa7.96□□□□□ -1.14
VCX3A-201ENST00000381089 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
VCX3A-201ENST00000381089 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
VCX3A-201ENST00000381089 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
VCX3A-201ENST00000381089 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
VCX3A-201ENST00000381089 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
VCX3A-201ENST00000381089 HRES1P13985 223 aa7.92□□□□□ -1.14
VCX3A-201ENST00000381089 MPLKIPQ8TAP9 179 aa7.92□□□□□ -1.14
VCX3A-201ENST00000381089 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
VCX3A-201ENST00000381089 A8MWP4 228 aa7.91□□□□□ -1.14
VCX3A-201ENST00000381089 BPY2O14599 106 aa7.91□□□□□ -1.14
VCX3A-201ENST00000381089 NDUFB1O75438 58 aa7.9□□□□□ -1.14
VCX3A-201ENST00000381089 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
VCX3A-201ENST00000381089 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
VCX3A-201ENST00000381089 SYNE2Q8WXH0 6885 aaKnown RBP7.87□□□□□ -1.15
VCX3A-201ENST00000381089 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
VCX3A-201ENST00000381089 C8orf87E5RJ46 101 aa7.86□□□□□ -1.15
VCX3A-201ENST00000381089 K7EQZ3 153 aa7.86□□□□□ -1.15
VCX3A-201ENST00000381089 ACYP1P07311 99 aa7.86□□□□□ -1.15
VCX3A-201ENST00000381089 Q8N9L7 120 aa7.86□□□□□ -1.15
VCX3A-201ENST00000381089 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
VCX3A-201ENST00000381089 C8orf17Q9NRJ1 99 aa7.84□□□□□ -1.15
VCX3A-201ENST00000381089 KRTAP19-6Q3LI70 58 aa7.81□□□□□ -1.16
VCX3A-201ENST00000381089 J3QR89 54 aa7.8□□□□□ -1.16
VCX3A-201ENST00000381089 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
VCX3A-201ENST00000381089 CXCL6P80162 114 aa7.76□□□□□ -1.17
VCX3A-201ENST00000381089 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
VCX3A-201ENST00000381089 SPINK7P58062 85 aa7.74□□□□□ -1.17
VCX3A-201ENST00000381089 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
VCX3A-201ENST00000381089 hDV103S1A0JD37 113 aa7.73□□□□□ -1.17
VCX3A-201ENST00000381089 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
VCX3A-201ENST00000381089 ATP5EP2Q5VTU8 51 aa7.72□□□□□ -1.17
VCX3A-201ENST00000381089 LINC00643Q86TS7 51 aa7.72□□□□□ -1.17
VCX3A-201ENST00000381089 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
VCX3A-201ENST00000381089 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.18
VCX3A-201ENST00000381089 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
VCX3A-201ENST00000381089 K7ERU9 68 aa7.7□□□□□ -1.18
VCX3A-201ENST00000381089 NDUFS5O43920 106 aa7.69□□□□□ -1.18
VCX3A-201ENST00000381089 Q8N9P0 234 aaPredicted RBP7.69□□□□□ -1.18
VCX3A-201ENST00000381089 HIST1H4AP62805 103 aaKnown RBP7.68□□□□□ -1.18
VCX3A-201ENST00000381089 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
VCX3A-201ENST00000381089 A0A087WVE0 104 aa7.62□□□□□ -1.19
VCX3A-201ENST00000381089 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
VCX3A-201ENST00000381089 Q5W150 140 aa7.54□□□□□ -1.2
VCX3A-201ENST00000381089 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
VCX3A-201ENST00000381089 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
VCX3A-201ENST00000381089 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
VCX3A-201ENST00000381089 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
VCX3A-201ENST00000381089 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
VCX3A-201ENST00000381089 NEBP20929 6669 aa7.43□□□□□ -1.22
VCX3A-201ENST00000381089 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
VCX3A-201ENST00000381089 UQCRQO14949 82 aa7.41□□□□□ -1.22
VCX3A-201ENST00000381089 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
VCX3A-201ENST00000381089 TRAV22A0A0B4J277 110 aa7.4□□□□□ -1.22
VCX3A-201ENST00000381089 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
VCX3A-201ENST00000381089 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
VCX3A-201ENST00000381089 H0Y9P7 68 aa7.38□□□□□ -1.23
VCX3A-201ENST00000381089 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
VCX3A-201ENST00000381089 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
VCX3A-201ENST00000381089 A6NN06 94 aa7.37□□□□□ -1.23
VCX3A-201ENST00000381089 ATOX1O00244 68 aa7.31□□□□□ -1.24
VCX3A-201ENST00000381089 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms