RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 WFDC13Q8IUB5 93 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 Q96NJ1 140 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
POLR2J3-201ENST00000379340 MMP24-AS1A0A0U1RRL7 71 aa6.21□□□□□ -1.42
POLR2J3-201ENST00000379340 LCE2BO14633 110 aa6.21□□□□□ -1.42
POLR2J3-201ENST00000379340 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
POLR2J3-201ENST00000379340 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
POLR2J3-201ENST00000379340 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
POLR2J3-201ENST00000379340 H3BPC8 53 aa6.2□□□□□ -1.42
POLR2J3-201ENST00000379340 MP68P56378 58 aa6.2□□□□□ -1.42
POLR2J3-201ENST00000379340 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
POLR2J3-201ENST00000379340 FLG2Q5D862 2391 aaPredicted RBP6.2□□□□□ -1.42
POLR2J3-201ENST00000379340 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
POLR2J3-201ENST00000379340 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
POLR2J3-201ENST00000379340 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
POLR2J3-201ENST00000379340 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
POLR2J3-201ENST00000379340 hDV103S1A0JD37 113 aa6.18□□□□□ -1.42
POLR2J3-201ENST00000379340 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
POLR2J3-201ENST00000379340 C8orf17Q9NRJ1 99 aa6.17□□□□□ -1.42
POLR2J3-201ENST00000379340 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
POLR2J3-201ENST00000379340 H0Y9P7 68 aa6.14□□□□□ -1.43
POLR2J3-201ENST00000379340 Q5XG85 94 aa6.14□□□□□ -1.43
POLR2J3-201ENST00000379340 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
POLR2J3-201ENST00000379340 FAT1Q14517 4588 aa6.12□□□□□ -1.43
POLR2J3-201ENST00000379340 OXTP01178 125 aa6.12□□□□□ -1.43
POLR2J3-201ENST00000379340 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
POLR2J3-201ENST00000379340 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
POLR2J3-201ENST00000379340 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
POLR2J3-201ENST00000379340 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
POLR2J3-201ENST00000379340 A0A087X002 238 aa6.1□□□□□ -1.43
POLR2J3-201ENST00000379340 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
POLR2J3-201ENST00000379340 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
POLR2J3-201ENST00000379340 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
POLR2J3-201ENST00000379340 SPINK6Q6UWN8 80 aa6.09□□□□□ -1.43
POLR2J3-201ENST00000379340 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
POLR2J3-201ENST00000379340 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
POLR2J3-201ENST00000379340 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
POLR2J3-201ENST00000379340 Q5VSD8 79 aa6.07□□□□□ -1.44
POLR2J3-201ENST00000379340 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
POLR2J3-201ENST00000379340 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
POLR2J3-201ENST00000379340 NDUFS5O43920 106 aa6.06□□□□□ -1.44
POLR2J3-201ENST00000379340 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
POLR2J3-201ENST00000379340 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
POLR2J3-201ENST00000379340 SPINK1P00995 79 aa6.03□□□□□ -1.44
POLR2J3-201ENST00000379340 SMR3BP02814 79 aaPredicted RBP6.03□□□□□ -1.44
POLR2J3-201ENST00000379340 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
POLR2J3-201ENST00000379340 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
POLR2J3-201ENST00000379340 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
POLR2J3-201ENST00000379340 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
POLR2J3-201ENST00000379340 LINC00313P59037 77 aa6.01□□□□□ -1.45
POLR2J3-201ENST00000379340 SPAG11AQ6PDA7 123 aa6.01□□□□□ -1.45
POLR2J3-201ENST00000379340 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
POLR2J3-201ENST00000379340 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
POLR2J3-201ENST00000379340 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
POLR2J3-201ENST00000379340 Q8N9P0 234 aaPredicted RBP5.97□□□□□ -1.45
POLR2J3-201ENST00000379340 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
POLR2J3-201ENST00000379340 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
POLR2J3-201ENST00000379340 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
POLR2J3-201ENST00000379340 PRR4Q16378 134 aa5.95□□□□□ -1.46
POLR2J3-201ENST00000379340 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
POLR2J3-201ENST00000379340 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
POLR2J3-201ENST00000379340 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
POLR2J3-201ENST00000379340 C4orf26Q17RF5 130 aa5.93□□□□□ -1.46
POLR2J3-201ENST00000379340 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
POLR2J3-201ENST00000379340 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
POLR2J3-201ENST00000379340 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
POLR2J3-201ENST00000379340 Q5W150 140 aa5.92□□□□□ -1.46
POLR2J3-201ENST00000379340 Q1T7F1 81 aa5.89□□□□□ -1.47
POLR2J3-201ENST00000379340 V9GYY9 64 aa5.89□□□□□ -1.47
POLR2J3-201ENST00000379340 MPLKIPQ8TAP9 179 aa5.87□□□□□ -1.47
POLR2J3-201ENST00000379340 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
POLR2J3-201ENST00000379340 COA5Q86WW8 74 aa5.86□□□□□ -1.47
POLR2J3-201ENST00000379340 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
POLR2J3-201ENST00000379340 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
POLR2J3-201ENST00000379340 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
POLR2J3-201ENST00000379340 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
POLR2J3-201ENST00000379340 PRO0628Q9UI54 55 aa5.84□□□□□ -1.48
POLR2J3-201ENST00000379340 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
POLR2J3-201ENST00000379340 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
POLR2J3-201ENST00000379340 HRES1P13985 223 aa5.8□□□□□ -1.48
POLR2J3-201ENST00000379340 ACYP2P14621 99 aa5.8□□□□□ -1.48
POLR2J3-201ENST00000379340 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
POLR2J3-201ENST00000379340 LRP2P98164 4655 aa5.79□□□□□ -1.48
POLR2J3-201ENST00000379340 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
POLR2J3-201ENST00000379340 A8MUU9 505 aa5.76□□□□□ -1.49
POLR2J3-201ENST00000379340 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
POLR2J3-201ENST00000379340 IGKV2D-30A0A075B6S6 120 aa5.76□□□□□ -1.49
POLR2J3-201ENST00000379340 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
POLR2J3-201ENST00000379340 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
POLR2J3-201ENST00000379340 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
POLR2J3-201ENST00000379340 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
POLR2J3-201ENST00000379340 PSPHP1O15172 72 aa5.72□□□□□ -1.49
POLR2J3-201ENST00000379340 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
POLR2J3-201ENST00000379340 A8MUN3 132 aa5.72□□□□□ -1.49
POLR2J3-201ENST00000379340 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
POLR2J3-201ENST00000379340 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
POLR2J3-201ENST00000379340 Q5VV11 94 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms