RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 LINC00313P59037 77 aa11.58□□□□□ -0.56
GFRA3-202ENST00000378362 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
GFRA3-202ENST00000378362 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
GFRA3-202ENST00000378362 ATP11AUNQ6ZP68 121 aa11.55□□□□□ -0.56
GFRA3-202ENST00000378362 PDE6GP18545 87 aa11.53□□□□□ -0.56
GFRA3-202ENST00000378362 C20orf166-AS1Q96NR2 134 aa11.53□□□□□ -0.56
GFRA3-202ENST00000378362 A8MUU9 505 aa11.51□□□□□ -0.57
GFRA3-202ENST00000378362 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
GFRA3-202ENST00000378362 KRTAP19-2Q3LHN2 52 aa11.5□□□□□ -0.57
GFRA3-202ENST00000378362 A0A1B0GVX0 72 aa11.49□□□□□ -0.57
GFRA3-202ENST00000378362 K7EP34 96 aa11.49□□□□□ -0.57
GFRA3-202ENST00000378362 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
GFRA3-202ENST00000378362 PRO0461Q9UI25 63 aa11.46□□□□□ -0.57
GFRA3-202ENST00000378362 SCGB1A1P11684 91 aa11.46□□□□□ -0.58
GFRA3-202ENST00000378362 NREPQ16612 68 aa11.44□□□□□ -0.58
GFRA3-202ENST00000378362 A0A1B0GW54 56 aa11.43□□□□□ -0.58
GFRA3-202ENST00000378362 J3KT08 172 aa11.43□□□□□ -0.58
GFRA3-202ENST00000378362 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.58
GFRA3-202ENST00000378362 A8MWP4 228 aa11.38□□□□□ -0.59
GFRA3-202ENST00000378362 NDUFB1O75438 58 aa11.37□□□□□ -0.59
GFRA3-202ENST00000378362 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
GFRA3-202ENST00000378362 GTF2H5Q6ZYL4 71 aa11.36□□□□□ -0.59
GFRA3-202ENST00000378362 FLGP20930 4061 aaPredicted RBP11.35□□□□□ -0.59
GFRA3-202ENST00000378362 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
GFRA3-202ENST00000378362 COX6B2Q6YFQ2 88 aa11.32□□□□□ -0.6
GFRA3-202ENST00000378362 MT1HP80294 61 aa11.31□□□□□ -0.6
GFRA3-202ENST00000378362 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
GFRA3-202ENST00000378362 K7EQZ3 153 aa11.29□□□□□ -0.6
GFRA3-202ENST00000378362 Q6ZVQ6 151 aa11.28□□□□□ -0.6
GFRA3-202ENST00000378362 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
GFRA3-202ENST00000378362 Q8N9L7 120 aa11.26□□□□□ -0.61
GFRA3-202ENST00000378362 BPY2O14599 106 aa11.25□□□□□ -0.61
GFRA3-202ENST00000378362 LINC00846Q9NV44 126 aa11.25□□□□□ -0.61
GFRA3-202ENST00000378362 F8W1H4 67 aa11.24□□□□□ -0.61
GFRA3-202ENST00000378362 MMP24-AS1A0A0U1RRL7 71 aa11.22□□□□□ -0.61
GFRA3-202ENST00000378362 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
GFRA3-202ENST00000378362 ZCCHC13Q8WW36 166 aaKnown RBP11.19□□□□□ -0.62
GFRA3-202ENST00000378362 J3QR89 54 aa11.19□□□□□ -0.62
GFRA3-202ENST00000378362 M0R2T5 61 aa11.15□□□□□ -0.62
GFRA3-202ENST00000378362 hDV103S1A0JD37 113 aa11.14□□□□□ -0.63
GFRA3-202ENST00000378362 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
GFRA3-202ENST00000378362 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
GFRA3-202ENST00000378362 WFDC13Q8IUB5 93 aa11.13□□□□□ -0.63
GFRA3-202ENST00000378362 TMEM254Q8TBM7 123 aa11.12□□□□□ -0.63
GFRA3-202ENST00000378362 NDUFS5O43920 106 aa11.11□□□□□ -0.63
GFRA3-202ENST00000378362 HRES1P13985 223 aa11.11□□□□□ -0.63
GFRA3-202ENST00000378362 SPINK7P58062 85 aa11.08□□□□□ -0.64
GFRA3-202ENST00000378362 KRTAP9-2Q9BYQ4 174 aa11.06□□□□□ -0.64
GFRA3-202ENST00000378362 FAM236DA0A1B0GTK5 79 aa11.04□□□□□ -0.64
GFRA3-202ENST00000378362 FAM236CP0DP71 79 aa11.04□□□□□ -0.64
GFRA3-202ENST00000378362 KRTAP10-6P60371 365 aaPredicted RBP11.04□□□□□ -0.64
GFRA3-202ENST00000378362 CASC2Q6XLA1 102 aa11.04□□□□□ -0.64
GFRA3-202ENST00000378362 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.64
GFRA3-202ENST00000378362 LORP23490 312 aaPredicted RBP11□□□□□ -0.65
GFRA3-202ENST00000378362 Q5W150 140 aa10.98□□□□□ -0.65
GFRA3-202ENST00000378362 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
GFRA3-202ENST00000378362 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
GFRA3-202ENST00000378362 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
GFRA3-202ENST00000378362 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
GFRA3-202ENST00000378362 CXCL6P80162 114 aa10.88□□□□□ -0.67
GFRA3-202ENST00000378362 FSIP2Q5CZC0 6907 aa10.85□□□□□ -0.67
GFRA3-202ENST00000378362 ACYP1P07311 99 aa10.83□□□□□ -0.68
GFRA3-202ENST00000378362 FAM240AA0A1B0GVK7 77 aa10.8□□□□□ -0.68
GFRA3-202ENST00000378362 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
GFRA3-202ENST00000378362 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
GFRA3-202ENST00000378362 C7orf65Q6ZTY9 151 aa10.76□□□□□ -0.69
GFRA3-202ENST00000378362 KRTAP9-8Q9BYQ0 159 aa10.74□□□□□ -0.69
GFRA3-202ENST00000378362 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
GFRA3-202ENST00000378362 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
GFRA3-202ENST00000378362 C4orf26Q17RF5 130 aa10.69□□□□□ -0.7
GFRA3-202ENST00000378362 A0A087WVE0 104 aa10.67□□□□□ -0.7
GFRA3-202ENST00000378362 ATP5EP2Q5VTU8 51 aa10.65□□□□□ -0.7
GFRA3-202ENST00000378362 TP53AIP1Q9HCN2 124 aa10.64□□□□□ -0.71
GFRA3-202ENST00000378362 LINC00643Q86TS7 51 aa10.63□□□□□ -0.71
GFRA3-202ENST00000378362 MT2AP02795 61 aa10.63□□□□□ -0.71
GFRA3-202ENST00000378362 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
GFRA3-202ENST00000378362 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
GFRA3-202ENST00000378362 MT1FP04733 61 aa10.57□□□□□ -0.72
GFRA3-202ENST00000378362 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
GFRA3-202ENST00000378362 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
GFRA3-202ENST00000378362 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
GFRA3-202ENST00000378362 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
GFRA3-202ENST00000378362 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
GFRA3-202ENST00000378362 CYP4F30PQ9H0H9 118 aa10.48□□□□□ -0.73
GFRA3-202ENST00000378362 USH2AO75445 5202 aa10.48□□□□□ -0.73
GFRA3-202ENST00000378362 CRCT1Q9UGL9 99 aa10.47□□□□□ -0.73
GFRA3-202ENST00000378362 C5orf47Q569G3 176 aa10.47□□□□□ -0.73
GFRA3-202ENST00000378362 C1orf64Q8NEQ6 169 aa10.47□□□□□ -0.73
GFRA3-202ENST00000378362 IMUPQ9GZP8 106 aa10.45□□□□□ -0.74
GFRA3-202ENST00000378362 H0Y9P7 68 aa10.43□□□□□ -0.74
GFRA3-202ENST00000378362 UQCRQO14949 82 aa10.42□□□□□ -0.74
GFRA3-202ENST00000378362 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
GFRA3-202ENST00000378362 LOC101927531A0A1B0GV80 90 aa10.38□□□□□ -0.75
GFRA3-202ENST00000378362 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
GFRA3-202ENST00000378362 SSPOA2VEC9 5147 aa10.35□□□□□ -0.75
GFRA3-202ENST00000378362 OCR1Q9BZK8 76 aa10.35□□□□□ -0.75
GFRA3-202ENST00000378362 LCE2BO14633 110 aa10.33□□□□□ -0.76
GFRA3-202ENST00000378362 S4R3F8 94 aa10.33□□□□□ -0.76
GFRA3-202ENST00000378362 LCA10Q71F78 164 aa10.31□□□□□ -0.76
GFRA3-202ENST00000378362 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms