RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 MTURNQ8N3F0 131 aa6.71□□□□□ -1.33
HLA-DQA2-210ENST00000374940 Q96NJ1 140 aa6.71□□□□□ -1.33
HLA-DQA2-210ENST00000374940 J3QR89 54 aa6.71□□□□□ -1.34
HLA-DQA2-210ENST00000374940 A0A1B0GW54 56 aa6.7□□□□□ -1.34
HLA-DQA2-210ENST00000374940 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA2-210ENST00000374940 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
HLA-DQA2-210ENST00000374940 MUC2Q02817 5179 aa6.69□□□□□ -1.34
HLA-DQA2-210ENST00000374940 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
HLA-DQA2-210ENST00000374940 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
HLA-DQA2-210ENST00000374940 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
HLA-DQA2-210ENST00000374940 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
HLA-DQA2-210ENST00000374940 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA2-210ENST00000374940 J3KT08 172 aa6.61□□□□□ -1.35
HLA-DQA2-210ENST00000374940 DSCR10P59022 87 aa6.59□□□□□ -1.35
HLA-DQA2-210ENST00000374940 PCOTHQ58A44 107 aa6.59□□□□□ -1.35
HLA-DQA2-210ENST00000374940 LINC00313P59037 77 aa6.58□□□□□ -1.36
HLA-DQA2-210ENST00000374940 NREPQ16612 68 aa6.58□□□□□ -1.36
HLA-DQA2-210ENST00000374940 Q75L30 129 aa6.58□□□□□ -1.36
HLA-DQA2-210ENST00000374940 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
HLA-DQA2-210ENST00000374940 A0A0U1RQV1 116 aa6.56□□□□□ -1.36
HLA-DQA2-210ENST00000374940 A0A1B0GVX0 72 aa6.56□□□□□ -1.36
HLA-DQA2-210ENST00000374940 MT-ATP8P03928 68 aa6.56□□□□□ -1.36
HLA-DQA2-210ENST00000374940 NDUFB1O75438 58 aa6.55□□□□□ -1.36
HLA-DQA2-210ENST00000374940 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
HLA-DQA2-210ENST00000374940 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
HLA-DQA2-210ENST00000374940 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
HLA-DQA2-210ENST00000374940 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
HLA-DQA2-210ENST00000374940 A8MUU9 505 aa6.54□□□□□ -1.36
HLA-DQA2-210ENST00000374940 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
HLA-DQA2-210ENST00000374940 A8MWP4 228 aa6.53□□□□□ -1.36
HLA-DQA2-210ENST00000374940 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
HLA-DQA2-210ENST00000374940 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
HLA-DQA2-210ENST00000374940 IGKV3D-7A0A0C4DH55 119 aa6.5□□□□□ -1.37
HLA-DQA2-210ENST00000374940 Q6ZVQ6 151 aa6.49□□□□□ -1.37
HLA-DQA2-210ENST00000374940 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
HLA-DQA2-210ENST00000374940 BPY2O14599 106 aa6.47□□□□□ -1.37
HLA-DQA2-210ENST00000374940 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
HLA-DQA2-210ENST00000374940 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
HLA-DQA2-210ENST00000374940 ANAPC13Q9BS18 74 aa6.46□□□□□ -1.37
HLA-DQA2-210ENST00000374940 UBL5Q9BZL1 73 aa6.46□□□□□ -1.37
HLA-DQA2-210ENST00000374940 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.37
HLA-DQA2-210ENST00000374940 K7EQZ3 153 aa6.44□□□□□ -1.38
HLA-DQA2-210ENST00000374940 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
HLA-DQA2-210ENST00000374940 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
HLA-DQA2-210ENST00000374940 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
HLA-DQA2-210ENST00000374940 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
HLA-DQA2-210ENST00000374940 FAM240AA0A1B0GVK7 77 aa6.41□□□□□ -1.38
HLA-DQA2-210ENST00000374940 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
HLA-DQA2-210ENST00000374940 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
HLA-DQA2-210ENST00000374940 hDV103S1A0JD37 113 aa6.38□□□□□ -1.39
HLA-DQA2-210ENST00000374940 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
HLA-DQA2-210ENST00000374940 ACYP1P07311 99 aa6.38□□□□□ -1.39
HLA-DQA2-210ENST00000374940 Q8N9L7 120 aa6.38□□□□□ -1.39
HLA-DQA2-210ENST00000374940 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
HLA-DQA2-210ENST00000374940 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
HLA-DQA2-210ENST00000374940 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
HLA-DQA2-210ENST00000374940 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
HLA-DQA2-210ENST00000374940 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
HLA-DQA2-210ENST00000374940 CXCL6P80162 114 aa6.35□□□□□ -1.39
HLA-DQA2-210ENST00000374940 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
HLA-DQA2-210ENST00000374940 NDUFS5O43920 106 aa6.32□□□□□ -1.4
HLA-DQA2-210ENST00000374940 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
HLA-DQA2-210ENST00000374940 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
HLA-DQA2-210ENST00000374940 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
HLA-DQA2-210ENST00000374940 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
HLA-DQA2-210ENST00000374940 SMIM20Q8N5G0 67 aa6.29□□□□□ -1.4
HLA-DQA2-210ENST00000374940 SPINK7P58062 85 aa6.27□□□□□ -1.41
HLA-DQA2-210ENST00000374940 ATP5EP2Q5VTU8 51 aa6.27□□□□□ -1.41
HLA-DQA2-210ENST00000374940 LINC00643Q86TS7 51 aa6.27□□□□□ -1.41
HLA-DQA2-210ENST00000374940 HRES1P13985 223 aa6.25□□□□□ -1.41
HLA-DQA2-210ENST00000374940 MT1HP80294 61 aa6.25□□□□□ -1.41
HLA-DQA2-210ENST00000374940 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
HLA-DQA2-210ENST00000374940 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
HLA-DQA2-210ENST00000374940 UQCRQO14949 82 aa6.24□□□□□ -1.41
HLA-DQA2-210ENST00000374940 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
HLA-DQA2-210ENST00000374940 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
HLA-DQA2-210ENST00000374940 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
HLA-DQA2-210ENST00000374940 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
HLA-DQA2-210ENST00000374940 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
HLA-DQA2-210ENST00000374940 Q5W150 140 aa6.22□□□□□ -1.41
HLA-DQA2-210ENST00000374940 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
HLA-DQA2-210ENST00000374940 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
HLA-DQA2-210ENST00000374940 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
HLA-DQA2-210ENST00000374940 COX7CP15954 63 aa6.2□□□□□ -1.42
HLA-DQA2-210ENST00000374940 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
HLA-DQA2-210ENST00000374940 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
HLA-DQA2-210ENST00000374940 M0R2T5 61 aa6.18□□□□□ -1.42
HLA-DQA2-210ENST00000374940 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
HLA-DQA2-210ENST00000374940 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
HLA-DQA2-210ENST00000374940 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
HLA-DQA2-210ENST00000374940 ATOX1O00244 68 aa6.15□□□□□ -1.42
HLA-DQA2-210ENST00000374940 A0A087WVE0 104 aa6.12□□□□□ -1.43
HLA-DQA2-210ENST00000374940 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
HLA-DQA2-210ENST00000374940 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
HLA-DQA2-210ENST00000374940 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
HLA-DQA2-210ENST00000374940 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
HLA-DQA2-210ENST00000374940 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
HLA-DQA2-210ENST00000374940 TMEM258P61165 79 aa6.09□□□□□ -1.43
HLA-DQA2-210ENST00000374940 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.44
HLA-DQA2-210ENST00000374940 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms