RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 UBR4Q5T4S7 5183 aa10.35□□□□□ -0.75
CDX4-201ENST00000373514 Q96NJ1 140 aa10.34□□□□□ -0.75
CDX4-201ENST00000373514 TPRXLQ17RH7 258 aa10.33□□□□□ -0.76
CDX4-201ENST00000373514 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
CDX4-201ENST00000373514 ASB16-AS1Q495Z4 193 aa10.32□□□□□ -0.76
CDX4-201ENST00000373514 IMUPQ9GZP8 106 aa10.31□□□□□ -0.76
CDX4-201ENST00000373514 DSCR10P59022 87 aa10.3□□□□□ -0.76
CDX4-201ENST00000373514 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
CDX4-201ENST00000373514 HIST1H4AP62805 103 aaKnown RBP10.29□□□□□ -0.76
CDX4-201ENST00000373514 Q8N9L7 120 aa10.29□□□□□ -0.76
CDX4-201ENST00000373514 IGKV4-1P06312 121 aa10.28□□□□□ -0.76
CDX4-201ENST00000373514 J3KT08 172 aa10.28□□□□□ -0.76
CDX4-201ENST00000373514 A0A087WVE0 104 aa10.24□□□□□ -0.77
CDX4-201ENST00000373514 K7EQZ3 153 aa10.24□□□□□ -0.77
CDX4-201ENST00000373514 A8MWP4 228 aa10.23□□□□□ -0.77
CDX4-201ENST00000373514 C9orf92A6NGG3 77 aa10.22□□□□□ -0.77
CDX4-201ENST00000373514 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
CDX4-201ENST00000373514 NDUFB1O75438 58 aa10.18□□□□□ -0.78
CDX4-201ENST00000373514 XP32Q5T750 250 aa10.16□□□□□ -0.78
CDX4-201ENST00000373514 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
CDX4-201ENST00000373514 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
CDX4-201ENST00000373514 A0A1B0GVX0 72 aa10.15□□□□□ -0.78
CDX4-201ENST00000373514 SCGB1A1P11684 91 aa10.14□□□□□ -0.79
CDX4-201ENST00000373514 IGHV6-1A0A0B4J1U7 121 aa10.13□□□□□ -0.79
CDX4-201ENST00000373514 RNF213Q63HN8 5207 aa10.1□□□□□ -0.79
CDX4-201ENST00000373514 HCG22E2RYF7 251 aa10.1□□□□□ -0.79
CDX4-201ENST00000373514 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
CDX4-201ENST00000373514 C8orf17Q9NRJ1 99 aa10.08□□□□□ -0.8
CDX4-201ENST00000373514 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
CDX4-201ENST00000373514 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
CDX4-201ENST00000373514 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
CDX4-201ENST00000373514 CASC2Q6XLA1 102 aa10.04□□□□□ -0.8
CDX4-201ENST00000373514 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
CDX4-201ENST00000373514 hDV103S1A0JD37 113 aa10.02□□□□□ -0.81
CDX4-201ENST00000373514 LINC00313P59037 77 aa10.02□□□□□ -0.81
CDX4-201ENST00000373514 ATOX1O00244 68 aa10.01□□□□□ -0.81
CDX4-201ENST00000373514 TMEM254Q8TBM7 123 aa9.97□□□□□ -0.81
CDX4-201ENST00000373514 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
CDX4-201ENST00000373514 RPL37P61927 97 aaKnown RBP9.95□□□□□ -0.82
CDX4-201ENST00000373514 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
CDX4-201ENST00000373514 ANAPC13Q9BS18 74 aa9.95□□□□□ -0.82
CDX4-201ENST00000373514 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
CDX4-201ENST00000373514 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
CDX4-201ENST00000373514 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
CDX4-201ENST00000373514 MUC2Q02817 5179 aa9.92□□□□□ -0.82
CDX4-201ENST00000373514 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
CDX4-201ENST00000373514 OCR1Q9BZK8 76 aa9.92□□□□□ -0.82
CDX4-201ENST00000373514 TRAV7A0A075B6U4 112 aa9.89□□□□□ -0.83
CDX4-201ENST00000373514 NDUFS5O43920 106 aa9.88□□□□□ -0.83
CDX4-201ENST00000373514 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
CDX4-201ENST00000373514 Q75L30 129 aa9.87□□□□□ -0.83
CDX4-201ENST00000373514 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
CDX4-201ENST00000373514 PCP4P48539 62 aa9.86□□□□□ -0.83
CDX4-201ENST00000373514 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
CDX4-201ENST00000373514 A8MUU9 505 aa9.84□□□□□ -0.83
CDX4-201ENST00000373514 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
CDX4-201ENST00000373514 UQCRQO14949 82 aa9.82□□□□□ -0.84
CDX4-201ENST00000373514 COX7CP15954 63 aa9.82□□□□□ -0.84
CDX4-201ENST00000373514 ATP11AUNQ6ZP68 121 aa9.77□□□□□ -0.84
CDX4-201ENST00000373514 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
CDX4-201ENST00000373514 C5orf47Q569G3 176 aa9.74□□□□□ -0.85
CDX4-201ENST00000373514 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
CDX4-201ENST00000373514 H0Y9P7 68 aa9.72□□□□□ -0.85
CDX4-201ENST00000373514 Q5W150 140 aa9.72□□□□□ -0.85
CDX4-201ENST00000373514 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
CDX4-201ENST00000373514 MP68P56378 58 aa9.7□□□□□ -0.86
CDX4-201ENST00000373514 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
CDX4-201ENST00000373514 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
CDX4-201ENST00000373514 ZCCHC13Q8WW36 166 aaKnown RBP9.66□□□□□ -0.86
CDX4-201ENST00000373514 SNURFQ9Y675 71 aa9.66□□□□□ -0.86
CDX4-201ENST00000373514 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
CDX4-201ENST00000373514 H3BPC8 53 aa9.63□□□□□ -0.87
CDX4-201ENST00000373514 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
CDX4-201ENST00000373514 KRTAP19-2Q3LHN2 52 aa9.61□□□□□ -0.87
CDX4-201ENST00000373514 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
CDX4-201ENST00000373514 CYSTM1Q9H1C7 97 aa9.6□□□□□ -0.87
CDX4-201ENST00000373514 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
CDX4-201ENST00000373514 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
CDX4-201ENST00000373514 IGKV2-30P06310 120 aa9.53□□□□□ -0.88
CDX4-201ENST00000373514 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.88
CDX4-201ENST00000373514 IGKV2D-30A0A075B6S6 120 aa9.51□□□□□ -0.89
CDX4-201ENST00000373514 CYP4F30PQ9H0H9 118 aa9.51□□□□□ -0.89
CDX4-201ENST00000373514 NDUFC1O43677 76 aa9.49□□□□□ -0.89
CDX4-201ENST00000373514 H7BZZ5 65 aa9.48□□□□□ -0.89
CDX4-201ENST00000373514 C7orf65Q6ZTY9 151 aa9.46□□□□□ -0.89
CDX4-201ENST00000373514 HRES1P13985 223 aa9.46□□□□□ -0.9
CDX4-201ENST00000373514 COX6B2Q6YFQ2 88 aa9.46□□□□□ -0.9
CDX4-201ENST00000373514 SPINK7P58062 85 aa9.44□□□□□ -0.9
CDX4-201ENST00000373514 MT1HP80294 61 aa9.41□□□□□ -0.9
CDX4-201ENST00000373514 MPLKIPQ8TAP9 179 aa9.38□□□□□ -0.91
CDX4-201ENST00000373514 TMEM258P61165 79 aa9.37□□□□□ -0.91
CDX4-201ENST00000373514 SPANXA2-OT1Q8N9U9 137 aa9.33□□□□□ -0.92
CDX4-201ENST00000373514 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
CDX4-201ENST00000373514 LCE2BO14633 110 aa9.32□□□□□ -0.92
CDX4-201ENST00000373514 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
CDX4-201ENST00000373514 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
CDX4-201ENST00000373514 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
CDX4-201ENST00000373514 ATP5EP56381 51 aaPredicted RBP9.26□□□□□ -0.93
CDX4-201ENST00000373514 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
CDX4-201ENST00000373514 M0R2T5 61 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms