RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 IGFL1Q6UW32 110 aa6.31□□□□□ -1.4
COL5A1-202ENST00000371820 Q8N9L7 120 aa6.31□□□□□ -1.4
COL5A1-202ENST00000371820 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
COL5A1-202ENST00000371820 LRP2P98164 4655 aa6.3□□□□□ -1.4
COL5A1-202ENST00000371820 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
COL5A1-202ENST00000371820 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
COL5A1-202ENST00000371820 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
COL5A1-202ENST00000371820 IGLV7-43P04211 117 aa6.27□□□□□ -1.41
COL5A1-202ENST00000371820 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
COL5A1-202ENST00000371820 V9GYY9 64 aa6.27□□□□□ -1.41
COL5A1-202ENST00000371820 K7EQZ3 153 aa6.26□□□□□ -1.41
COL5A1-202ENST00000371820 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
COL5A1-202ENST00000371820 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
COL5A1-202ENST00000371820 A0A087WSZ3 146 aa6.25□□□□□ -1.41
COL5A1-202ENST00000371820 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
COL5A1-202ENST00000371820 A8MWP4 228 aa6.24□□□□□ -1.41
COL5A1-202ENST00000371820 PRLHP81277 87 aa6.24□□□□□ -1.41
COL5A1-202ENST00000371820 HRCT1Q6UXD1 115 aa6.24□□□□□ -1.41
COL5A1-202ENST00000371820 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
COL5A1-202ENST00000371820 TP53AIP1Q9HCN2 124 aa6.24□□□□□ -1.41
COL5A1-202ENST00000371820 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
COL5A1-202ENST00000371820 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
COL5A1-202ENST00000371820 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
COL5A1-202ENST00000371820 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
COL5A1-202ENST00000371820 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
COL5A1-202ENST00000371820 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
COL5A1-202ENST00000371820 KRTAP11-1Q8IUC1 163 aa6.2□□□□□ -1.42
COL5A1-202ENST00000371820 ZNF861PO60384 105 aa6.19□□□□□ -1.42
COL5A1-202ENST00000371820 Q1T7F1 81 aa6.19□□□□□ -1.42
COL5A1-202ENST00000371820 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
COL5A1-202ENST00000371820 MOBPQ13875 183 aa6.17□□□□□ -1.42
COL5A1-202ENST00000371820 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
COL5A1-202ENST00000371820 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
COL5A1-202ENST00000371820 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
COL5A1-202ENST00000371820 H0Y9P7 68 aa6.16□□□□□ -1.42
COL5A1-202ENST00000371820 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
COL5A1-202ENST00000371820 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
COL5A1-202ENST00000371820 PRR26Q8N8Z3 221 aa6.15□□□□□ -1.42
COL5A1-202ENST00000371820 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.42
COL5A1-202ENST00000371820 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
COL5A1-202ENST00000371820 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
COL5A1-202ENST00000371820 CD164Q04900 197 aa6.11□□□□□ -1.43
COL5A1-202ENST00000371820 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
COL5A1-202ENST00000371820 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
COL5A1-202ENST00000371820 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
COL5A1-202ENST00000371820 LPAP08519 4548 aa6.09□□□□□ -1.43
COL5A1-202ENST00000371820 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
COL5A1-202ENST00000371820 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
COL5A1-202ENST00000371820 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
COL5A1-202ENST00000371820 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
COL5A1-202ENST00000371820 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
COL5A1-202ENST00000371820 A0A1B0GVX0 72 aa6.07□□□□□ -1.44
COL5A1-202ENST00000371820 FAM229BQ4G0N7 80 aa6.07□□□□□ -1.44
COL5A1-202ENST00000371820 TYMSOSQ8TAI1 123 aa6.07□□□□□ -1.44
COL5A1-202ENST00000371820 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
COL5A1-202ENST00000371820 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
COL5A1-202ENST00000371820 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
COL5A1-202ENST00000371820 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
COL5A1-202ENST00000371820 A0A087X002 238 aa6.03□□□□□ -1.44
COL5A1-202ENST00000371820 Q96NJ1 140 aa6.03□□□□□ -1.44
COL5A1-202ENST00000371820 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
COL5A1-202ENST00000371820 PRR4Q16378 134 aa6.01□□□□□ -1.45
COL5A1-202ENST00000371820 NDUFS5O43920 106 aa6□□□□□ -1.45
COL5A1-202ENST00000371820 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
COL5A1-202ENST00000371820 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
COL5A1-202ENST00000371820 ANAPC11Q9NYG5 84 aa5.99□□□□□ -1.45
COL5A1-202ENST00000371820 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
COL5A1-202ENST00000371820 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
COL5A1-202ENST00000371820 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
COL5A1-202ENST00000371820 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
COL5A1-202ENST00000371820 COA5Q86WW8 74 aa5.95□□□□□ -1.46
COL5A1-202ENST00000371820 MUC2Q02817 5179 aa5.95□□□□□ -1.46
COL5A1-202ENST00000371820 ACYP2P14621 99 aa5.93□□□□□ -1.46
COL5A1-202ENST00000371820 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
COL5A1-202ENST00000371820 PSPHP1O15172 72 aa5.92□□□□□ -1.46
COL5A1-202ENST00000371820 Q75L30 129 aa5.92□□□□□ -1.46
COL5A1-202ENST00000371820 A8MUN3 132 aa5.91□□□□□ -1.46
COL5A1-202ENST00000371820 LINC00313P59037 77 aa5.91□□□□□ -1.46
COL5A1-202ENST00000371820 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
COL5A1-202ENST00000371820 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
COL5A1-202ENST00000371820 Q5VV11 94 aa5.89□□□□□ -1.47
COL5A1-202ENST00000371820 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
COL5A1-202ENST00000371820 SPINK1P00995 79 aa5.88□□□□□ -1.47
COL5A1-202ENST00000371820 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
COL5A1-202ENST00000371820 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
COL5A1-202ENST00000371820 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
COL5A1-202ENST00000371820 RPS29P62273 56 aaKnown RBP5.86□□□□□ -1.47
COL5A1-202ENST00000371820 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
COL5A1-202ENST00000371820 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
COL5A1-202ENST00000371820 A6NED7 52 aa5.84□□□□□ -1.47
COL5A1-202ENST00000371820 HRES1P13985 223 aa5.83□□□□□ -1.48
COL5A1-202ENST00000371820 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
COL5A1-202ENST00000371820 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
COL5A1-202ENST00000371820 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
COL5A1-202ENST00000371820 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
COL5A1-202ENST00000371820 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
COL5A1-202ENST00000371820 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
COL5A1-202ENST00000371820 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
COL5A1-202ENST00000371820 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
COL5A1-202ENST00000371820 Q5W150 140 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms