RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TEN1Q86WV5 123 aa7.79□□□□□ -1.16
SSR4-204ENST00000370087 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
SSR4-204ENST00000370087 SS18L2Q9UHA2 77 aa7.78□□□□□ -1.16
SSR4-204ENST00000370087 C9JAW5 83 aa7.76□□□□□ -1.17
SSR4-204ENST00000370087 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
SSR4-204ENST00000370087 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
SSR4-204ENST00000370087 A0A1B0GV72 72 aa7.75□□□□□ -1.17
SSR4-204ENST00000370087 GTF2H5Q6ZYL4 71 aa7.75□□□□□ -1.17
SSR4-204ENST00000370087 JMJD7-PLA2G4BH0Y9G9 81 aa7.74□□□□□ -1.17
SSR4-204ENST00000370087 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
SSR4-204ENST00000370087 CCKP06307 115 aa7.71□□□□□ -1.18
SSR4-204ENST00000370087 KRTAP10-10P60014 251 aa7.71□□□□□ -1.18
SSR4-204ENST00000370087 Q96NJ1 140 aa7.71□□□□□ -1.18
SSR4-204ENST00000370087 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
SSR4-204ENST00000370087 A0A087WSZ3 146 aa7.69□□□□□ -1.18
SSR4-204ENST00000370087 H3BT86 120 aa7.69□□□□□ -1.18
SSR4-204ENST00000370087 PDE6GP18545 87 aa7.69□□□□□ -1.18
SSR4-204ENST00000370087 C20orf166-AS1Q96NR2 134 aa7.69□□□□□ -1.18
SSR4-204ENST00000370087 A0A1W2PNM2 257 aa7.68□□□□□ -1.18
SSR4-204ENST00000370087 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
SSR4-204ENST00000370087 A8MUU9 505 aa7.67□□□□□ -1.18
SSR4-204ENST00000370087 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
SSR4-204ENST00000370087 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
SSR4-204ENST00000370087 PRO0461Q9UI25 63 aa7.67□□□□□ -1.18
SSR4-204ENST00000370087 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
SSR4-204ENST00000370087 LOC110117498A0A087WWA1 95 aa7.63□□□□□ -1.19
SSR4-204ENST00000370087 A0A1B0GW54 56 aa7.63□□□□□ -1.19
SSR4-204ENST00000370087 FAM236DA0A1B0GTK5 79 aa7.61□□□□□ -1.19
SSR4-204ENST00000370087 FAM236CP0DP71 79 aa7.61□□□□□ -1.19
SSR4-204ENST00000370087 C14orf132Q9NPU4 83 aa7.61□□□□□ -1.19
SSR4-204ENST00000370087 F8W1H4 67 aa7.6□□□□□ -1.19
SSR4-204ENST00000370087 Q6ZQT0 140 aa7.6□□□□□ -1.19
SSR4-204ENST00000370087 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
SSR4-204ENST00000370087 MPLKIPQ8TAP9 179 aa7.59□□□□□ -1.19
SSR4-204ENST00000370087 ETDBQ3ZM63 59 aa7.58□□□□□ -1.2
SSR4-204ENST00000370087 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
SSR4-204ENST00000370087 HRES1P13985 223 aa7.57□□□□□ -1.2
SSR4-204ENST00000370087 IGKV4-1P06312 121 aa7.55□□□□□ -1.2
SSR4-204ENST00000370087 DSCR10P59022 87 aa7.55□□□□□ -1.2
SSR4-204ENST00000370087 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
SSR4-204ENST00000370087 J3KT08 172 aa7.53□□□□□ -1.2
SSR4-204ENST00000370087 LINC00472Q9H8W2 130 aa7.53□□□□□ -1.2
SSR4-204ENST00000370087 NREPQ16612 68 aa7.5□□□□□ -1.21
SSR4-204ENST00000370087 NDUFB1O75438 58 aa7.49□□□□□ -1.21
SSR4-204ENST00000370087 DEFB116Q30KQ4 102 aa7.49□□□□□ -1.21
SSR4-204ENST00000370087 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
SSR4-204ENST00000370087 LINC00313P59037 77 aa7.47□□□□□ -1.21
SSR4-204ENST00000370087 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
SSR4-204ENST00000370087 NEBP20929 6669 aa7.45□□□□□ -1.22
SSR4-204ENST00000370087 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
SSR4-204ENST00000370087 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
SSR4-204ENST00000370087 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
SSR4-204ENST00000370087 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.22
SSR4-204ENST00000370087 A8MWP4 228 aa7.4□□□□□ -1.22
SSR4-204ENST00000370087 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
SSR4-204ENST00000370087 BPY2O14599 106 aa7.38□□□□□ -1.23
SSR4-204ENST00000370087 Q8N9P0 234 aaPredicted RBP7.38□□□□□ -1.23
SSR4-204ENST00000370087 Q6ZVQ6 151 aa7.36□□□□□ -1.23
SSR4-204ENST00000370087 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
SSR4-204ENST00000370087 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
SSR4-204ENST00000370087 J3QR89 54 aa7.33□□□□□ -1.24
SSR4-204ENST00000370087 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
SSR4-204ENST00000370087 K7ERU9 68 aa7.3□□□□□ -1.24
SSR4-204ENST00000370087 ACYP1P07311 99 aa7.3□□□□□ -1.24
SSR4-204ENST00000370087 FAM240AA0A1B0GVK7 77 aa7.28□□□□□ -1.24
SSR4-204ENST00000370087 K7EQZ3 153 aa7.28□□□□□ -1.24
SSR4-204ENST00000370087 KRTAP20-1Q3LI63 56 aa7.28□□□□□ -1.24
SSR4-204ENST00000370087 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
SSR4-204ENST00000370087 SPINK7P58062 85 aa7.25□□□□□ -1.25
SSR4-204ENST00000370087 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
SSR4-204ENST00000370087 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
SSR4-204ENST00000370087 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
SSR4-204ENST00000370087 CXCL6P80162 114 aa7.23□□□□□ -1.25
SSR4-204ENST00000370087 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
SSR4-204ENST00000370087 NDUFS5O43920 106 aa7.21□□□□□ -1.26
SSR4-204ENST00000370087 Q8N9L7 120 aa7.21□□□□□ -1.26
SSR4-204ENST00000370087 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
SSR4-204ENST00000370087 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
SSR4-204ENST00000370087 ATP5EP2Q5VTU8 51 aa7.18□□□□□ -1.26
SSR4-204ENST00000370087 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
SSR4-204ENST00000370087 LINC00643Q86TS7 51 aa7.16□□□□□ -1.26
SSR4-204ENST00000370087 MT-ATP8P03928 68 aa7.13□□□□□ -1.27
SSR4-204ENST00000370087 MDN1Q9NU22 5596 aa7.1□□□□□ -1.27
SSR4-204ENST00000370087 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
SSR4-204ENST00000370087 A6NN06 94 aa7.09□□□□□ -1.27
SSR4-204ENST00000370087 A0A087WVE0 104 aa7.08□□□□□ -1.28
SSR4-204ENST00000370087 KMT2DO14686 5537 aa7.07□□□□□ -1.28
SSR4-204ENST00000370087 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
SSR4-204ENST00000370087 MT1BP07438 61 aa7.06□□□□□ -1.28
SSR4-204ENST00000370087 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
SSR4-204ENST00000370087 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
SSR4-204ENST00000370087 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
SSR4-204ENST00000370087 IGKV2D-30A0A075B6S6 120 aa7□□□□□ -1.29
SSR4-204ENST00000370087 IGKV2-30P06310 120 aa7□□□□□ -1.29
SSR4-204ENST00000370087 Q5W150 140 aa6.99□□□□□ -1.29
SSR4-204ENST00000370087 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
SSR4-204ENST00000370087 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
SSR4-204ENST00000370087 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
SSR4-204ENST00000370087 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
SSR4-204ENST00000370087 Q5VV11 94 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms