RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
TPM3-212ENST00000368533 RYR2Q92736 4967 aa6.53□□□□□ -1.36
TPM3-212ENST00000368533 ANAPC11Q9NYG5 84 aa6.52□□□□□ -1.37
TPM3-212ENST00000368533 MP68P56378 58 aa6.52□□□□□ -1.37
TPM3-212ENST00000368533 A6NN06 94 aa6.52□□□□□ -1.37
TPM3-212ENST00000368533 PSORS1C2Q9UIG4 136 aa6.52□□□□□ -1.37
TPM3-212ENST00000368533 CIRBP-AS1Q8TBR5 109 aa6.51□□□□□ -1.37
TPM3-212ENST00000368533 RYR3Q15413 4870 aa6.5□□□□□ -1.37
TPM3-212ENST00000368533 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
TPM3-212ENST00000368533 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
TPM3-212ENST00000368533 NDUFB1O75438 58 aa6.49□□□□□ -1.37
TPM3-212ENST00000368533 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
TPM3-212ENST00000368533 H0Y9P7 68 aa6.49□□□□□ -1.37
TPM3-212ENST00000368533 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
TPM3-212ENST00000368533 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
TPM3-212ENST00000368533 IGLV9-49A0A0B4J1Y8 123 aa6.47□□□□□ -1.37
TPM3-212ENST00000368533 MOBPQ13875 183 aa6.47□□□□□ -1.37
TPM3-212ENST00000368533 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
TPM3-212ENST00000368533 H0Y9J4 135 aa6.46□□□□□ -1.37
TPM3-212ENST00000368533 COA5Q86WW8 74 aa6.46□□□□□ -1.37
TPM3-212ENST00000368533 FAT1Q14517 4588 aa6.46□□□□□ -1.38
TPM3-212ENST00000368533 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
TPM3-212ENST00000368533 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
TPM3-212ENST00000368533 NDUFS5O43920 106 aa6.45□□□□□ -1.38
TPM3-212ENST00000368533 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
TPM3-212ENST00000368533 SPINK7P58062 85 aa6.45□□□□□ -1.38
TPM3-212ENST00000368533 Q75L30 129 aa6.45□□□□□ -1.38
TPM3-212ENST00000368533 C8orf87E5RJ46 101 aa6.44□□□□□ -1.38
TPM3-212ENST00000368533 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
TPM3-212ENST00000368533 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
TPM3-212ENST00000368533 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
TPM3-212ENST00000368533 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
TPM3-212ENST00000368533 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
TPM3-212ENST00000368533 LOC101927531A0A1B0GV80 90 aa6.42□□□□□ -1.38
TPM3-212ENST00000368533 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
TPM3-212ENST00000368533 SPRR1BP22528 89 aa6.39□□□□□ -1.39
TPM3-212ENST00000368533 H3BS24 57 aa6.39□□□□□ -1.39
TPM3-212ENST00000368533 A8MWP4 228 aa6.38□□□□□ -1.39
TPM3-212ENST00000368533 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
TPM3-212ENST00000368533 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
TPM3-212ENST00000368533 ZNF861PO60384 105 aa6.38□□□□□ -1.39
TPM3-212ENST00000368533 LINC00313P59037 77 aa6.38□□□□□ -1.39
TPM3-212ENST00000368533 IGLV7-43P04211 117 aa6.37□□□□□ -1.39
TPM3-212ENST00000368533 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
TPM3-212ENST00000368533 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
TPM3-212ENST00000368533 Q6ZSA8 131 aa6.35□□□□□ -1.39
TPM3-212ENST00000368533 CDK2AP2O75956 126 aa6.34□□□□□ -1.4
TPM3-212ENST00000368533 IGHV6-1A0A0B4J1U7 121 aa6.33□□□□□ -1.4
TPM3-212ENST00000368533 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
TPM3-212ENST00000368533 A0A1B0GVY2 172 aa6.31□□□□□ -1.4
TPM3-212ENST00000368533 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
TPM3-212ENST00000368533 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
TPM3-212ENST00000368533 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
TPM3-212ENST00000368533 LCE2BO14633 110 aa6.3□□□□□ -1.4
TPM3-212ENST00000368533 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
TPM3-212ENST00000368533 MMP24-AS1A0A0U1RRL7 71 aa6.3□□□□□ -1.4
TPM3-212ENST00000368533 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
TPM3-212ENST00000368533 A0A087X002 238 aa6.29□□□□□ -1.4
TPM3-212ENST00000368533 HRES1P13985 223 aa6.28□□□□□ -1.4
TPM3-212ENST00000368533 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
TPM3-212ENST00000368533 H3BPC8 53 aa6.27□□□□□ -1.41
TPM3-212ENST00000368533 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
TPM3-212ENST00000368533 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
TPM3-212ENST00000368533 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
TPM3-212ENST00000368533 Q96NJ1 140 aa6.25□□□□□ -1.41
TPM3-212ENST00000368533 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
TPM3-212ENST00000368533 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
TPM3-212ENST00000368533 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
TPM3-212ENST00000368533 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
TPM3-212ENST00000368533 HSPG2P98160 4391 aa6.21□□□□□ -1.41
TPM3-212ENST00000368533 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.42
TPM3-212ENST00000368533 LRP1Q07954 4544 aaKnown RBP6.21□□□□□ -1.42
TPM3-212ENST00000368533 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
TPM3-212ENST00000368533 LCE2CQ5TA81 110 aa6.2□□□□□ -1.42
TPM3-212ENST00000368533 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
TPM3-212ENST00000368533 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
TPM3-212ENST00000368533 RYR1P21817 5038 aa6.15□□□□□ -1.42
TPM3-212ENST00000368533 CSAG1Q6PB30 78 aa6.15□□□□□ -1.43
TPM3-212ENST00000368533 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.43
TPM3-212ENST00000368533 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
TPM3-212ENST00000368533 RETNLBQ9BQ08 111 aa6.14□□□□□ -1.43
TPM3-212ENST00000368533 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
TPM3-212ENST00000368533 ASB16-AS1Q495Z4 193 aa6.13□□□□□ -1.43
TPM3-212ENST00000368533 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
TPM3-212ENST00000368533 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
TPM3-212ENST00000368533 KRTAP10-4P60372 401 aaPredicted RBP6.11□□□□□ -1.43
TPM3-212ENST00000368533 Q5VSD8 79 aa6.1□□□□□ -1.43
TPM3-212ENST00000368533 SSBP3-AS1Q7Z2R9 100 aa6.1□□□□□ -1.43
TPM3-212ENST00000368533 Q5W150 140 aa6.1□□□□□ -1.43
TPM3-212ENST00000368533 A0A1B0GU69 56 aa6.08□□□□□ -1.44
TPM3-212ENST00000368533 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
TPM3-212ENST00000368533 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
TPM3-212ENST00000368533 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
TPM3-212ENST00000368533 ACYP2P14621 99 aa6.02□□□□□ -1.45
TPM3-212ENST00000368533 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
TPM3-212ENST00000368533 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
TPM3-212ENST00000368533 IGKV2-30P06310 120 aa5.98□□□□□ -1.45
TPM3-212ENST00000368533 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
TPM3-212ENST00000368533 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
TPM3-212ENST00000368533 TNXBP22105 4242 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms