RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TRACP01848 142 aa7.9□□□□□ -1.14
CKS1B-202ENST00000368436 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
CKS1B-202ENST00000368436 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
CKS1B-202ENST00000368436 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-202ENST00000368436 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
CKS1B-202ENST00000368436 PSMB2P49721 201 aa7.88□□□□□ -1.15
CKS1B-202ENST00000368436 UBE2V1Q13404 147 aa7.88□□□□□ -1.15
CKS1B-202ENST00000368436 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
CKS1B-202ENST00000368436 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
CKS1B-202ENST00000368436 K7ERJ3 54 aa7.86□□□□□ -1.15
CKS1B-202ENST00000368436 COX6CP09669 75 aa7.86□□□□□ -1.15
CKS1B-202ENST00000368436 KRTAP4-12Q9BQ66 201 aa7.86□□□□□ -1.15
CKS1B-202ENST00000368436 HSD52Q0P140 79 aa7.85□□□□□ -1.15
CKS1B-202ENST00000368436 MTURNQ8N3F0 131 aa7.83□□□□□ -1.16
CKS1B-202ENST00000368436 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
CKS1B-202ENST00000368436 H3BS24 57 aa7.81□□□□□ -1.16
CKS1B-202ENST00000368436 RBM3P98179 157 aaKnown RBP7.81□□□□□ -1.16
CKS1B-202ENST00000368436 KRTAP9-9Q9BYP9 154 aa7.81□□□□□ -1.16
CKS1B-202ENST00000368436 KRTAP9-4Q9BYQ2 154 aa7.81□□□□□ -1.16
CKS1B-202ENST00000368436 SPINK7P58062 85 aa7.8□□□□□ -1.16
CKS1B-202ENST00000368436 VPS25Q9BRG1 176 aa7.8□□□□□ -1.16
CKS1B-202ENST00000368436 MACF1Q9UPN3 7388 aaKnown RBP7.79□□□□□ -1.16
CKS1B-202ENST00000368436 J3KT08 172 aa7.78□□□□□ -1.16
CKS1B-202ENST00000368436 DSCR8Q96T75 97 aa7.78□□□□□ -1.16
CKS1B-202ENST00000368436 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
CKS1B-202ENST00000368436 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-202ENST00000368436 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
CKS1B-202ENST00000368436 Q6ZQT0 140 aa7.74□□□□□ -1.17
CKS1B-202ENST00000368436 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
CKS1B-202ENST00000368436 C9JAW5 83 aa7.73□□□□□ -1.17
CKS1B-202ENST00000368436 SCGB1C2P0DMR2 95 aa7.73□□□□□ -1.17
CKS1B-202ENST00000368436 NDUFB1O75438 58 aa7.71□□□□□ -1.18
CKS1B-202ENST00000368436 BAALC-AS2P0C853 105 aa7.71□□□□□ -1.18
CKS1B-202ENST00000368436 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
CKS1B-202ENST00000368436 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
CKS1B-202ENST00000368436 SYNE2Q8WXH0 6885 aaKnown RBP7.71□□□□□ -1.18
CKS1B-202ENST00000368436 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
CKS1B-202ENST00000368436 A8MWP4 228 aa7.69□□□□□ -1.18
CKS1B-202ENST00000368436 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
CKS1B-202ENST00000368436 C8orf17Q9NRJ1 99 aa7.68□□□□□ -1.18
CKS1B-202ENST00000368436 A0A1B0GW54 56 aa7.65□□□□□ -1.18
CKS1B-202ENST00000368436 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
CKS1B-202ENST00000368436 LYRM7Q5U5X0 104 aa7.63□□□□□ -1.19
CKS1B-202ENST00000368436 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
CKS1B-202ENST00000368436 JMJD7-PLA2G4BH0Y9G9 81 aa7.62□□□□□ -1.19
CKS1B-202ENST00000368436 Q6ZVQ6 151 aa7.61□□□□□ -1.19
CKS1B-202ENST00000368436 PDE6GP18545 87 aa7.59□□□□□ -1.19
CKS1B-202ENST00000368436 PRR15Q8IV56 129 aa7.59□□□□□ -1.19
CKS1B-202ENST00000368436 ATXN8Q156A1 80 aa7.57□□□□□ -1.2
CKS1B-202ENST00000368436 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
CKS1B-202ENST00000368436 TMEM254Q8TBM7 123 aa7.55□□□□□ -1.2
CKS1B-202ENST00000368436 MMP24-AS1A0A0U1RRL7 71 aa7.54□□□□□ -1.2
CKS1B-202ENST00000368436 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
CKS1B-202ENST00000368436 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
CKS1B-202ENST00000368436 NREPQ16612 68 aa7.52□□□□□ -1.21
CKS1B-202ENST00000368436 NAA38Q9BRA0 125 aaKnown RBP7.52□□□□□ -1.21
CKS1B-202ENST00000368436 M0R143 59 aa7.49□□□□□ -1.21
CKS1B-202ENST00000368436 KRTAP6-3Q3LI67 103 aa7.49□□□□□ -1.21
CKS1B-202ENST00000368436 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
CKS1B-202ENST00000368436 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
CKS1B-202ENST00000368436 K7EQZ3 153 aa7.45□□□□□ -1.22
CKS1B-202ENST00000368436 NDUFS5O43920 106 aa7.45□□□□□ -1.22
CKS1B-202ENST00000368436 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
CKS1B-202ENST00000368436 IGKV2-30P06310 120 aa7.42□□□□□ -1.22
CKS1B-202ENST00000368436 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
CKS1B-202ENST00000368436 Q5W150 140 aa7.42□□□□□ -1.22
CKS1B-202ENST00000368436 C7orf65Q6ZTY9 151 aa7.4□□□□□ -1.22
CKS1B-202ENST00000368436 BPY2O14599 106 aa7.36□□□□□ -1.23
CKS1B-202ENST00000368436 H3BT86 120 aa7.34□□□□□ -1.23
CKS1B-202ENST00000368436 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
CKS1B-202ENST00000368436 HCG22E2RYF7 251 aa7.31□□□□□ -1.24
CKS1B-202ENST00000368436 CASC2Q6XLA1 102 aa7.31□□□□□ -1.24
CKS1B-202ENST00000368436 Q8N9L7 120 aa7.29□□□□□ -1.24
CKS1B-202ENST00000368436 CXCL6P80162 114 aa7.27□□□□□ -1.25
CKS1B-202ENST00000368436 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
CKS1B-202ENST00000368436 NEBP20929 6669 aa7.27□□□□□ -1.25
CKS1B-202ENST00000368436 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
CKS1B-202ENST00000368436 MT1BP07438 61 aa7.26□□□□□ -1.25
CKS1B-202ENST00000368436 SMIM6P0DI80 62 aa7.26□□□□□ -1.25
CKS1B-202ENST00000368436 BATFQ16520 125 aa7.26□□□□□ -1.25
CKS1B-202ENST00000368436 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
CKS1B-202ENST00000368436 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
CKS1B-202ENST00000368436 A6NN06 94 aa7.24□□□□□ -1.25
CKS1B-202ENST00000368436 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
CKS1B-202ENST00000368436 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
CKS1B-202ENST00000368436 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
CKS1B-202ENST00000368436 TSTD3H0UI37 97 aa7.23□□□□□ -1.25
CKS1B-202ENST00000368436 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
CKS1B-202ENST00000368436 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
CKS1B-202ENST00000368436 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
CKS1B-202ENST00000368436 Q5VV11 94 aa7.21□□□□□ -1.26
CKS1B-202ENST00000368436 S4R3F8 94 aa7.2□□□□□ -1.26
CKS1B-202ENST00000368436 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
CKS1B-202ENST00000368436 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
CKS1B-202ENST00000368436 KRTAP4-2Q9BYR5 136 aa7.17□□□□□ -1.26
CKS1B-202ENST00000368436 LCA10Q71F78 164 aa7.16□□□□□ -1.26
CKS1B-202ENST00000368436 KRTAP10-5P60370 271 aa7.14□□□□□ -1.27
CKS1B-202ENST00000368436 UBL5Q9BZL1 73 aa7.12□□□□□ -1.27
CKS1B-202ENST00000368436 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
CKS1B-202ENST00000368436 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms