RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 PDE6GP18545 87 aa10.25□□□□□ -0.77
CEACAM3-201ENST00000344550 Q6ZQT0 140 aa10.24□□□□□ -0.77
CEACAM3-201ENST00000344550 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
CEACAM3-201ENST00000344550 NOTCH2NLQ7Z3S9 236 aa10.23□□□□□ -0.77
CEACAM3-201ENST00000344550 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
CEACAM3-201ENST00000344550 CRCT1Q9UGL9 99 aa10.21□□□□□ -0.77
CEACAM3-201ENST00000344550 FSIP2Q5CZC0 6907 aa10.18□□□□□ -0.78
CEACAM3-201ENST00000344550 NDUFB1O75438 58 aa10.18□□□□□ -0.78
CEACAM3-201ENST00000344550 TSTD3H0UI37 97 aa10.16□□□□□ -0.78
CEACAM3-201ENST00000344550 RBM12B-AS1Q9P1G2 102 aa10.14□□□□□ -0.79
CEACAM3-201ENST00000344550 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
CEACAM3-201ENST00000344550 NAA38Q9BRA0 125 aaKnown RBP10.13□□□□□ -0.79
CEACAM3-201ENST00000344550 A8MWP4 228 aa10.1□□□□□ -0.79
CEACAM3-201ENST00000344550 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
CEACAM3-201ENST00000344550 HRES1P13985 223 aa10.09□□□□□ -0.79
CEACAM3-201ENST00000344550 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 ZCCHC13Q8WW36 166 aaKnown RBP10.08□□□□□ -0.8
CEACAM3-201ENST00000344550 C14orf132Q9NPU4 83 aa10.06□□□□□ -0.8
CEACAM3-201ENST00000344550 MTURNQ8N3F0 131 aa10.05□□□□□ -0.8
CEACAM3-201ENST00000344550 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
CEACAM3-201ENST00000344550 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 H3BT86 120 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 NREPQ16612 68 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
CEACAM3-201ENST00000344550 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
CEACAM3-201ENST00000344550 BATFQ16520 125 aa10.01□□□□□ -0.81
CEACAM3-201ENST00000344550 PRR15Q8IV56 129 aa10□□□□□ -0.81
CEACAM3-201ENST00000344550 SPINK7P58062 85 aa9.99□□□□□ -0.81
CEACAM3-201ENST00000344550 Q6ZVQ6 151 aa9.97□□□□□ -0.81
CEACAM3-201ENST00000344550 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
CEACAM3-201ENST00000344550 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
CEACAM3-201ENST00000344550 TAX1BP3O14907 124 aa9.94□□□□□ -0.82
CEACAM3-201ENST00000344550 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
CEACAM3-201ENST00000344550 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
CEACAM3-201ENST00000344550 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
CEACAM3-201ENST00000344550 hDV103S1A0JD37 113 aa9.85□□□□□ -0.83
CEACAM3-201ENST00000344550 MT2AP02795 61 aa9.85□□□□□ -0.83
CEACAM3-201ENST00000344550 BPY2O14599 106 aa9.83□□□□□ -0.84
CEACAM3-201ENST00000344550 K7EQZ3 153 aa9.82□□□□□ -0.84
CEACAM3-201ENST00000344550 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
CEACAM3-201ENST00000344550 SPCS1Q9Y6A9 102 aa9.81□□□□□ -0.84
CEACAM3-201ENST00000344550 NDUFS5O43920 106 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 MT1FP04733 61 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 COL5A1-AS1Q5SY13 56 aa9.75□□□□□ -0.85
CEACAM3-201ENST00000344550 KRTAP9-3Q9BYQ3 159 aa9.71□□□□□ -0.86
CEACAM3-201ENST00000344550 SMCPP49901 116 aaPredicted RBP9.7□□□□□ -0.86
CEACAM3-201ENST00000344550 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
CEACAM3-201ENST00000344550 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 C7orf65Q6ZTY9 151 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CEACAM3-201ENST00000344550 PRO0461Q9UI25 63 aa9.66□□□□□ -0.86
CEACAM3-201ENST00000344550 K7EP34 96 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 CXCL6P80162 114 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 USH2AO75445 5202 aa9.64□□□□□ -0.87
CEACAM3-201ENST00000344550 Q5W150 140 aa9.63□□□□□ -0.87
CEACAM3-201ENST00000344550 LCE2BO14633 110 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 Q8N9L7 120 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
CEACAM3-201ENST00000344550 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 HCG22E2RYF7 251 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
CEACAM3-201ENST00000344550 GTF2H5Q6ZYL4 71 aa9.58□□□□□ -0.88
CEACAM3-201ENST00000344550 SSPOA2VEC9 5147 aa9.55□□□□□ -0.88
CEACAM3-201ENST00000344550 F8W1H4 67 aa9.53□□□□□ -0.88
CEACAM3-201ENST00000344550 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.48□□□□□ -0.89
CEACAM3-201ENST00000344550 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
CEACAM3-201ENST00000344550 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
CEACAM3-201ENST00000344550 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
CEACAM3-201ENST00000344550 ETDBQ3ZM63 59 aa9.41□□□□□ -0.9
CEACAM3-201ENST00000344550 FCGBPQ9Y6R7 5405 aaPredicted RBP9.4□□□□□ -0.9
CEACAM3-201ENST00000344550 KRTAP9-7A8MTY7 169 aa9.38□□□□□ -0.91
CEACAM3-201ENST00000344550 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
CEACAM3-201ENST00000344550 ACYP1P07311 99 aa9.34□□□□□ -0.91
CEACAM3-201ENST00000344550 PCP4L1A6NKN8 68 aa9.33□□□□□ -0.92
CEACAM3-201ENST00000344550 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CEACAM3-201ENST00000344550 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
CEACAM3-201ENST00000344550 CSAG1Q6PB30 78 aa9.28□□□□□ -0.92
CEACAM3-201ENST00000344550 S4R3F8 94 aa9.28□□□□□ -0.92
CEACAM3-201ENST00000344550 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
CEACAM3-201ENST00000344550 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
CEACAM3-201ENST00000344550 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
CEACAM3-201ENST00000344550 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
CEACAM3-201ENST00000344550 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
CEACAM3-201ENST00000344550 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
CEACAM3-201ENST00000344550 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
CEACAM3-201ENST00000344550 LCA10Q71F78 164 aa9.19□□□□□ -0.94
CEACAM3-201ENST00000344550 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
CEACAM3-201ENST00000344550 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
CEACAM3-201ENST00000344550 UQCRQO14949 82 aa9.13□□□□□ -0.95
CEACAM3-201ENST00000344550 ATOX1O00244 68 aa9.12□□□□□ -0.95
CEACAM3-201ENST00000344550 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
CEACAM3-201ENST00000344550 SPRR2GQ9BYE4 73 aa9.09□□□□□ -0.95
CEACAM3-201ENST00000344550 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
CEACAM3-201ENST00000344550 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
CEACAM3-201ENST00000344550 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
CEACAM3-201ENST00000344550 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
CEACAM3-201ENST00000344550 H0Y9P7 68 aa9.02□□□□□ -0.97
CEACAM3-201ENST00000344550 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms