RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
HERPUD1-202ENST00000344114 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
HERPUD1-202ENST00000344114 Q8N9L7 120 aa7.85□□□□□ -1.15
HERPUD1-202ENST00000344114 LINC00472Q9H8W2 130 aa7.85□□□□□ -1.15
HERPUD1-202ENST00000344114 MUC2Q02817 5179 aa7.84□□□□□ -1.15
HERPUD1-202ENST00000344114 K7EQZ3 153 aa7.83□□□□□ -1.16
HERPUD1-202ENST00000344114 Q96NJ1 140 aa7.82□□□□□ -1.16
HERPUD1-202ENST00000344114 DEFB116Q30KQ4 102 aa7.81□□□□□ -1.16
HERPUD1-202ENST00000344114 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
HERPUD1-202ENST00000344114 A8MWP4 228 aa7.8□□□□□ -1.16
HERPUD1-202ENST00000344114 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
HERPUD1-202ENST00000344114 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
HERPUD1-202ENST00000344114 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
HERPUD1-202ENST00000344114 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
HERPUD1-202ENST00000344114 TYMSOSQ8TAI1 123 aa7.78□□□□□ -1.16
HERPUD1-202ENST00000344114 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 NDUFB1O75438 58 aa7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 COX7CP15954 63 aa7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 Q5XG85 94 aa7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
HERPUD1-202ENST00000344114 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
HERPUD1-202ENST00000344114 LIMD2Q9BT23 127 aa7.76□□□□□ -1.17
HERPUD1-202ENST00000344114 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
HERPUD1-202ENST00000344114 UQCRQO14949 82 aa7.75□□□□□ -1.17
HERPUD1-202ENST00000344114 FAT4Q6V0I7 4981 aa7.74□□□□□ -1.17
HERPUD1-202ENST00000344114 CCDC179H3BU77 68 aa7.72□□□□□ -1.17
HERPUD1-202ENST00000344114 SPINK1P00995 79 aa7.71□□□□□ -1.17
HERPUD1-202ENST00000344114 PRR4Q16378 134 aa7.71□□□□□ -1.17
HERPUD1-202ENST00000344114 A0A1B0GVX0 72 aa7.71□□□□□ -1.18
HERPUD1-202ENST00000344114 RPS29P62273 56 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-202ENST00000344114 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
HERPUD1-202ENST00000344114 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
HERPUD1-202ENST00000344114 LINC00304Q8N9R0 145 aa7.7□□□□□ -1.18
HERPUD1-202ENST00000344114 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
HERPUD1-202ENST00000344114 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
HERPUD1-202ENST00000344114 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
HERPUD1-202ENST00000344114 OCR1Q9BZK8 76 aa7.69□□□□□ -1.18
HERPUD1-202ENST00000344114 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
HERPUD1-202ENST00000344114 IGHV6-1A0A0B4J1U7 121 aa7.65□□□□□ -1.18
HERPUD1-202ENST00000344114 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
HERPUD1-202ENST00000344114 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
HERPUD1-202ENST00000344114 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
HERPUD1-202ENST00000344114 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
HERPUD1-202ENST00000344114 C20orf197Q8N268 126 aa7.6□□□□□ -1.19
HERPUD1-202ENST00000344114 KLKP1Q107X0 134 aa7.59□□□□□ -1.2
HERPUD1-202ENST00000344114 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-202ENST00000344114 C5orf47Q569G3 176 aa7.57□□□□□ -1.2
HERPUD1-202ENST00000344114 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
HERPUD1-202ENST00000344114 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
HERPUD1-202ENST00000344114 LINC00313P59037 77 aa7.55□□□□□ -1.2
HERPUD1-202ENST00000344114 NOTCH2NLQ7Z3S9 236 aa7.54□□□□□ -1.2
HERPUD1-202ENST00000344114 NDUFC1O43677 76 aa7.52□□□□□ -1.21
HERPUD1-202ENST00000344114 MP68P56378 58 aa7.52□□□□□ -1.21
HERPUD1-202ENST00000344114 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
HERPUD1-202ENST00000344114 SNURFQ9Y675 71 aa7.52□□□□□ -1.21
HERPUD1-202ENST00000344114 H3BPC8 53 aa7.51□□□□□ -1.21
HERPUD1-202ENST00000344114 TRAV22A0A0B4J277 110 aa7.5□□□□□ -1.21
HERPUD1-202ENST00000344114 NDUFS5O43920 106 aa7.5□□□□□ -1.21
HERPUD1-202ENST00000344114 TMEM258P61165 79 aa7.5□□□□□ -1.21
HERPUD1-202ENST00000344114 H0Y9P7 68 aa7.49□□□□□ -1.21
HERPUD1-202ENST00000344114 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
HERPUD1-202ENST00000344114 H7BZZ5 65 aa7.47□□□□□ -1.21
HERPUD1-202ENST00000344114 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-202ENST00000344114 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.21
HERPUD1-202ENST00000344114 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-202ENST00000344114 RETNLBQ9BQ08 111 aa7.46□□□□□ -1.22
HERPUD1-202ENST00000344114 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-202ENST00000344114 LINC00208Q96KT6 92 aa7.43□□□□□ -1.22
HERPUD1-202ENST00000344114 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 C1orf64Q8NEQ6 169 aa7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
HERPUD1-202ENST00000344114 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
HERPUD1-202ENST00000344114 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
HERPUD1-202ENST00000344114 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
HERPUD1-202ENST00000344114 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
HERPUD1-202ENST00000344114 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
HERPUD1-202ENST00000344114 Q5W150 140 aa7.34□□□□□ -1.23
HERPUD1-202ENST00000344114 C9orf92A6NGG3 77 aa7.33□□□□□ -1.24
HERPUD1-202ENST00000344114 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
HERPUD1-202ENST00000344114 A8MUU9 505 aa7.31□□□□□ -1.24
HERPUD1-202ENST00000344114 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
HERPUD1-202ENST00000344114 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
HERPUD1-202ENST00000344114 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
HERPUD1-202ENST00000344114 IGKV2-30P06310 120 aa7.26□□□□□ -1.25
HERPUD1-202ENST00000344114 RPS28P62857 69 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-202ENST00000344114 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
HERPUD1-202ENST00000344114 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
HERPUD1-202ENST00000344114 PCOTHQ58A44 107 aa7.25□□□□□ -1.25
HERPUD1-202ENST00000344114 Q75L30 129 aa7.25□□□□□ -1.25
HERPUD1-202ENST00000344114 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.25
HERPUD1-202ENST00000344114 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
HERPUD1-202ENST00000344114 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
HERPUD1-202ENST00000344114 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
HERPUD1-202ENST00000344114 XP32Q5T750 250 aa7.16□□□□□ -1.26
HERPUD1-202ENST00000344114 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
HERPUD1-202ENST00000344114 HRES1P13985 223 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms