RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 XP32Q5T750 250 aa2.89□□□□□ -1.95
LRIT3-201ENST00000327908 C8orf17Q9NRJ1 99 aa2.89□□□□□ -1.95
LRIT3-201ENST00000327908 LINC00846Q9NV44 126 aa2.88□□□□□ -1.95
LRIT3-201ENST00000327908 IGHV6-1A0A0B4J1U7 121 aa2.87□□□□□ -1.95
LRIT3-201ENST00000327908 ATP11AUNQ6ZP68 121 aa2.87□□□□□ -1.95
LRIT3-201ENST00000327908 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
LRIT3-201ENST00000327908 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
LRIT3-201ENST00000327908 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
LRIT3-201ENST00000327908 MRPL34Q9BQ48 92 aaKnown RBP2.87□□□□□ -1.95
LRIT3-201ENST00000327908 A8MUU9 505 aa2.87□□□□□ -1.95
LRIT3-201ENST00000327908 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
LRIT3-201ENST00000327908 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
LRIT3-201ENST00000327908 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
LRIT3-201ENST00000327908 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 ATOX1O00244 68 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 FLG2Q5D862 2391 aaPredicted RBP2.85□□□□□ -1.95
LRIT3-201ENST00000327908 A0A0G2JQZ4 141 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 H3BPC8 53 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 DSCR10P59022 87 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 RETNLBQ9BQ08 111 aa2.85□□□□□ -1.95
LRIT3-201ENST00000327908 UQCRQO14949 82 aa2.84□□□□□ -1.95
LRIT3-201ENST00000327908 Q8N9P0 234 aaPredicted RBP2.84□□□□□ -1.95
LRIT3-201ENST00000327908 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
LRIT3-201ENST00000327908 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.95
LRIT3-201ENST00000327908 FAT1Q14517 4588 aa2.83□□□□□ -1.96
LRIT3-201ENST00000327908 HIST1H4AP62805 103 aaKnown RBP2.83□□□□□ -1.96
LRIT3-201ENST00000327908 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
LRIT3-201ENST00000327908 K7EQZ3 153 aa2.82□□□□□ -1.96
LRIT3-201ENST00000327908 C9orf92A6NGG3 77 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 NDUFS5O43920 106 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 KRTAP3-3Q9BYR6 98 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 KRTAP3-2Q9BYR7 98 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 SCGB1A1P11684 91 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 MP68P56378 58 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 KRTAP16-1A8MUX0 517 aa2.81□□□□□ -1.96
LRIT3-201ENST00000327908 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
LRIT3-201ENST00000327908 LOC101927531A0A1B0GV80 90 aa2.8□□□□□ -1.96
LRIT3-201ENST00000327908 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
LRIT3-201ENST00000327908 C5orf47Q569G3 176 aa2.8□□□□□ -1.96
LRIT3-201ENST00000327908 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
LRIT3-201ENST00000327908 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
LRIT3-201ENST00000327908 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
LRIT3-201ENST00000327908 TRAV22A0A0B4J277 110 aa2.78□□□□□ -1.96
LRIT3-201ENST00000327908 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
LRIT3-201ENST00000327908 PCOTHQ58A44 107 aa2.76□□□□□ -1.97
LRIT3-201ENST00000327908 H3BS24 57 aa2.75□□□□□ -1.97
LRIT3-201ENST00000327908 Q8N9L7 120 aa2.75□□□□□ -1.97
LRIT3-201ENST00000327908 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
LRIT3-201ENST00000327908 A8MUN3 132 aa2.74□□□□□ -1.97
LRIT3-201ENST00000327908 H0Y9P7 68 aa2.74□□□□□ -1.97
LRIT3-201ENST00000327908 NOTCH2NLQ7Z3S9 236 aa2.74□□□□□ -1.97
LRIT3-201ENST00000327908 TNXBP22105 4242 aa2.74□□□□□ -1.97
LRIT3-201ENST00000327908 IGKV2-30P06310 120 aa2.74□□□□□ -1.97
LRIT3-201ENST00000327908 NDUFC1O43677 76 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 MT-ATP8P03928 68 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 FAM236AA0A1B0GUQ0 79 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 FAM236BA0A1B0GV22 79 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 OCR1Q9BZK8 76 aa2.73□□□□□ -1.97
LRIT3-201ENST00000327908 FAM236DA0A1B0GTK5 79 aa2.72□□□□□ -1.97
LRIT3-201ENST00000327908 FAM236CP0DP71 79 aa2.72□□□□□ -1.97
LRIT3-201ENST00000327908 Q5W150 140 aa2.72□□□□□ -1.97
LRIT3-201ENST00000327908 SPINK7P58062 85 aa2.72□□□□□ -1.97
LRIT3-201ENST00000327908 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
LRIT3-201ENST00000327908 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
LRIT3-201ENST00000327908 ABCA13Q86UQ4 5058 aa2.71□□□□□ -1.98
LRIT3-201ENST00000327908 C1orf64Q8NEQ6 169 aa2.71□□□□□ -1.98
LRIT3-201ENST00000327908 IGKV2D-30A0A075B6S6 120 aa2.7□□□□□ -1.98
LRIT3-201ENST00000327908 A0A087WVE0 104 aa2.7□□□□□ -1.98
LRIT3-201ENST00000327908 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
LRIT3-201ENST00000327908 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
LRIT3-201ENST00000327908 LINC00208Q96KT6 92 aa2.69□□□□□ -1.98
LRIT3-201ENST00000327908 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
LRIT3-201ENST00000327908 COX7CP15954 63 aa2.68□□□□□ -1.98
LRIT3-201ENST00000327908 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
LRIT3-201ENST00000327908 HRES1P13985 223 aa2.67□□□□□ -1.98
LRIT3-201ENST00000327908 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
LRIT3-201ENST00000327908 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
LRIT3-201ENST00000327908 MPLKIPQ8TAP9 179 aa2.66□□□□□ -1.98
LRIT3-201ENST00000327908 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
LRIT3-201ENST00000327908 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
LRIT3-201ENST00000327908 KLKP1Q107X0 134 aa2.65□□□□□ -1.98
LRIT3-201ENST00000327908 CCDC179H3BU77 68 aa2.64□□□□□ -1.99
LRIT3-201ENST00000327908 ACYP2P14621 99 aa2.64□□□□□ -1.99
LRIT3-201ENST00000327908 HERC1Q15751 4861 aa2.63□□□□□ -1.99
LRIT3-201ENST00000327908 KRTAP4-8Q9BYQ9 185 aa2.63□□□□□ -1.99
LRIT3-201ENST00000327908 C20orf197Q8N268 126 aa2.62□□□□□ -1.99
LRIT3-201ENST00000327908 DMAC1Q96GE9 116 aa2.62□□□□□ -1.99
LRIT3-201ENST00000327908 S4R3F8 94 aa2.62□□□□□ -1.99
LRIT3-201ENST00000327908 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
LRIT3-201ENST00000327908 CYSTM1Q9H1C7 97 aa2.6□□□□□ -1.99
LRIT3-201ENST00000327908 CHKB-CPT1BH3BT56 60 aa2.59□□□□□ -1.99
LRIT3-201ENST00000327908 HMCN2Q8NDA2 5059 aa2.59□□□□□ -2
LRIT3-201ENST00000327908 TMEM258P61165 79 aa2.59□□□□□ -2
LRIT3-201ENST00000327908 M0R2T5 61 aa2.58□□□□□ -2
LRIT3-201ENST00000327908 C4orf26Q17RF5 130 aa2.58□□□□□ -2
LRIT3-201ENST00000327908 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
LRIT3-201ENST00000327908 H0YAA0 97 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms