RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 HIST1H2BDP58876 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 SNRPEP62304 92 aaKnown RBP5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST1H2BCP62807 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST2H2BEQ16778 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST1H2BHQ93079 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST1H2BNQ99877 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 HIST1H2BMQ99879 126 aa5.24□□□□□ -1.57
SMIM4-201ENST00000307106 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
SMIM4-201ENST00000307106 IGKV3D-7A0A0C4DH55 119 aa5.22□□□□□ -1.57
SMIM4-201ENST00000307106 A0A1B0GX51 115 aa5.22□□□□□ -1.57
SMIM4-201ENST00000307106 CCKP06307 115 aa5.22□□□□□ -1.57
SMIM4-201ENST00000307106 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
SMIM4-201ENST00000307106 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
SMIM4-201ENST00000307106 H3BQ85 93 aa5.18□□□□□ -1.58
SMIM4-201ENST00000307106 J3KT08 172 aa5.18□□□□□ -1.58
SMIM4-201ENST00000307106 SPRR2DP22532 72 aa5.18□□□□□ -1.58
SMIM4-201ENST00000307106 C5orf47Q569G3 176 aa5.17□□□□□ -1.58
SMIM4-201ENST00000307106 HIST1H4GQ99525 98 aa5.17□□□□□ -1.58
SMIM4-201ENST00000307106 C21orf62-AS1Q17RA5 79 aa5.16□□□□□ -1.58
SMIM4-201ENST00000307106 NDUFB1O75438 58 aa5.15□□□□□ -1.59
SMIM4-201ENST00000307106 C8orf17Q9NRJ1 99 aa5.15□□□□□ -1.59
SMIM4-201ENST00000307106 VPS25Q9BRG1 176 aa5.14□□□□□ -1.59
SMIM4-201ENST00000307106 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
SMIM4-201ENST00000307106 COA6Q5JTJ3 125 aaKnown RBP5.11□□□□□ -1.59
SMIM4-201ENST00000307106 Q6ZVQ6 151 aa5.11□□□□□ -1.59
SMIM4-201ENST00000307106 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
SMIM4-201ENST00000307106 A0A0B4J2C4 111 aa5.1□□□□□ -1.59
SMIM4-201ENST00000307106 HSBP1L1C9JCN9 74 aa5.1□□□□□ -1.59
SMIM4-201ENST00000307106 DNAL4O96015 105 aa5.1□□□□□ -1.59
SMIM4-201ENST00000307106 SMCPP49901 116 aaPredicted RBP5.1□□□□□ -1.59
SMIM4-201ENST00000307106 TMEM256-PLSCR3K7ERE1 68 aa5.09□□□□□ -1.59
SMIM4-201ENST00000307106 KLKP1Q107X0 134 aa5.09□□□□□ -1.59
SMIM4-201ENST00000307106 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
SMIM4-201ENST00000307106 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SMIM4-201ENST00000307106 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SMIM4-201ENST00000307106 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
SMIM4-201ENST00000307106 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
SMIM4-201ENST00000307106 TRIAP1O43715 76 aa5.05□□□□□ -1.6
SMIM4-201ENST00000307106 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
SMIM4-201ENST00000307106 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
SMIM4-201ENST00000307106 UBE2V1Q13404 147 aa5.04□□□□□ -1.6
SMIM4-201ENST00000307106 MRPL34Q9BQ48 92 aaKnown RBP5.04□□□□□ -1.6
SMIM4-201ENST00000307106 Q6ZQT0 140 aa5.03□□□□□ -1.6
SMIM4-201ENST00000307106 S4R3F8 94 aa5.03□□□□□ -1.6
SMIM4-201ENST00000307106 NDUFS5O43920 106 aa5.02□□□□□ -1.61
SMIM4-201ENST00000307106 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
SMIM4-201ENST00000307106 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
SMIM4-201ENST00000307106 PRO1854Q9UHT4 67 aa5.02□□□□□ -1.61
SMIM4-201ENST00000307106 COX8AP10176 69 aa5□□□□□ -1.61
SMIM4-201ENST00000307106 CRIPTQ9P021 101 aa5□□□□□ -1.61
SMIM4-201ENST00000307106 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
SMIM4-201ENST00000307106 LCA10Q71F78 164 aa4.99□□□□□ -1.61
SMIM4-201ENST00000307106 PRR15Q8IV56 129 aa4.99□□□□□ -1.61
SMIM4-201ENST00000307106 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
SMIM4-201ENST00000307106 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
SMIM4-201ENST00000307106 TMEM238LA0A1B0GVL6 79 aa4.98□□□□□ -1.61
SMIM4-201ENST00000307106 A0A1B0GW54 56 aa4.98□□□□□ -1.61
SMIM4-201ENST00000307106 A6NJY4 79 aa4.98□□□□□ -1.61
SMIM4-201ENST00000307106 C9JAW5 83 aa4.97□□□□□ -1.61
SMIM4-201ENST00000307106 DLEU1O43261 78 aa4.97□□□□□ -1.61
SMIM4-201ENST00000307106 Q5W150 140 aa4.97□□□□□ -1.61
SMIM4-201ENST00000307106 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
SMIM4-201ENST00000307106 hDV103S1A0JD37 113 aa4.95□□□□□ -1.62
SMIM4-201ENST00000307106 MT1XP80297 61 aa4.95□□□□□ -1.62
SMIM4-201ENST00000307106 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
SMIM4-201ENST00000307106 PSMB2P49721 201 aa4.94□□□□□ -1.62
SMIM4-201ENST00000307106 CEND1Q8N111 149 aa4.94□□□□□ -1.62
SMIM4-201ENST00000307106 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
SMIM4-201ENST00000307106 COX6CP09669 75 aa4.93□□□□□ -1.62
SMIM4-201ENST00000307106 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
SMIM4-201ENST00000307106 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
SMIM4-201ENST00000307106 HIST3H2BBQ8N257 126 aa4.92□□□□□ -1.62
SMIM4-201ENST00000307106 HIST1H2BLQ99880 126 aa4.92□□□□□ -1.62
SMIM4-201ENST00000307106 FXYD2P54710 66 aa4.91□□□□□ -1.62
SMIM4-201ENST00000307106 C14orf144Q96I85 54 aa4.91□□□□□ -1.62
SMIM4-201ENST00000307106 S100A2P29034 98 aa4.9□□□□□ -1.63
SMIM4-201ENST00000307106 K7EQZ3 153 aa4.89□□□□□ -1.63
SMIM4-201ENST00000307106 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
SMIM4-201ENST00000307106 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
SMIM4-201ENST00000307106 K7ERJ3 54 aa4.84□□□□□ -1.63
SMIM4-201ENST00000307106 BAALC-AS2P0C853 105 aa4.84□□□□□ -1.63
SMIM4-201ENST00000307106 PDE6GP18545 87 aa4.84□□□□□ -1.63
SMIM4-201ENST00000307106 NREPQ16612 68 aa4.84□□□□□ -1.63
SMIM4-201ENST00000307106 LOC110117498A0A087WWA1 95 aa4.82□□□□□ -1.64
SMIM4-201ENST00000307106 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
SMIM4-201ENST00000307106 PAM16Q9Y3D7 125 aa4.82□□□□□ -1.64
SMIM4-201ENST00000307106 JMJD7-PLA2G4BH0Y9G9 81 aa4.81□□□□□ -1.64
SMIM4-201ENST00000307106 SPATA45Q537H7 98 aa4.81□□□□□ -1.64
SMIM4-201ENST00000307106 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
SMIM4-201ENST00000307106 A8MUN3 132 aa4.79□□□□□ -1.64
SMIM4-201ENST00000307106 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
SMIM4-201ENST00000307106 CXCL6P80162 114 aa4.78□□□□□ -1.64
SMIM4-201ENST00000307106 CASC2Q6XLA1 102 aa4.77□□□□□ -1.65
SMIM4-201ENST00000307106 C14orf132Q9NPU4 83 aa4.75□□□□□ -1.65
SMIM4-201ENST00000307106 H0YAA0 97 aa4.73□□□□□ -1.65
SMIM4-201ENST00000307106 VAMP8Q9BV40 100 aa4.73□□□□□ -1.65
SMIM4-201ENST00000307106 A0A087WVE0 104 aa4.72□□□□□ -1.65
SMIM4-201ENST00000307106 S100A6P06703 90 aa4.72□□□□□ -1.65
SMIM4-201ENST00000307106 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms