RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 C1orf195Q5TG92 126 aa3.34□□□□□ -1.87
ITGB1-201ENST00000302278 MIR7-3HGQ8N6C7 128 aa3.34□□□□□ -1.87
ITGB1-201ENST00000302278 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
ITGB1-201ENST00000302278 A0A0U1RRA0 63 aa3.34□□□□□ -1.88
ITGB1-201ENST00000302278 IGKV3D-7A0A0C4DH55 119 aa3.33□□□□□ -1.88
ITGB1-201ENST00000302278 HRCT1Q6UXD1 115 aa3.33□□□□□ -1.88
ITGB1-201ENST00000302278 Q75L30 129 aa3.33□□□□□ -1.88
ITGB1-201ENST00000302278 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
ITGB1-201ENST00000302278 TRAV23DV6A0A075B6W5 121 aa3.32□□□□□ -1.88
ITGB1-201ENST00000302278 TRAV13-2A0A0B4J235 113 aa3.32□□□□□ -1.88
ITGB1-201ENST00000302278 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
ITGB1-201ENST00000302278 ST20-AS1Q8NBB2 130 aa3.32□□□□□ -1.88
ITGB1-201ENST00000302278 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
ITGB1-201ENST00000302278 DSCR8Q96T75 97 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-201ENST00000302278 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 MT1FP04733 61 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 TSPEAR-AS2P59090 65 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 RBM3P98179 157 aaKnown RBP3.31□□□□□ -1.88
ITGB1-201ENST00000302278 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 V9GYY9 64 aa3.31□□□□□ -1.88
ITGB1-201ENST00000302278 H0YGX0 51 aa3.3□□□□□ -1.88
ITGB1-201ENST00000302278 TIMM17BO60830 172 aa3.3□□□□□ -1.88
ITGB1-201ENST00000302278 LINC00846Q9NV44 126 aa3.3□□□□□ -1.88
ITGB1-201ENST00000302278 LAMTOR3Q9UHA4 124 aa3.3□□□□□ -1.88
ITGB1-201ENST00000302278 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
ITGB1-201ENST00000302278 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
ITGB1-201ENST00000302278 Q6JHZ5 121 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 IGLV5-48A0A075B6I7 105 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 ATP5EP2Q5VTU8 51 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 TRBV7-6A0A0J9YX20 115 aa3.29□□□□□ -1.88
ITGB1-201ENST00000302278 SMIM26A0A096LP01 95 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 JMJD7-PLA2G4BH0Y9G9 81 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 ELOF1P60002 83 aaKnown RBP3.28□□□□□ -1.88
ITGB1-201ENST00000302278 C14orf132Q9NPU4 83 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 ORMDL1Q9P0S3 153 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
ITGB1-201ENST00000302278 C4orf26Q17RF5 130 aa3.27□□□□□ -1.89
ITGB1-201ENST00000302278 LINC00308Q8TCZ7 52 aa3.27□□□□□ -1.89
ITGB1-201ENST00000302278 MPLKIPQ8TAP9 179 aa3.26□□□□□ -1.89
ITGB1-201ENST00000302278 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
ITGB1-201ENST00000302278 NDUFC1O43677 76 aa3.25□□□□□ -1.89
ITGB1-201ENST00000302278 ATP5EP56381 51 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-201ENST00000302278 ADAMTSL4-AS1Q5T5F5 129 aa3.25□□□□□ -1.89
ITGB1-201ENST00000302278 A0A087WVE0 104 aa3.25□□□□□ -1.89
ITGB1-201ENST00000302278 SEC61GP60059 68 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 A8MUU9 505 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 NEBP20929 6669 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 TMEM256-PLSCR3K7ERE1 68 aa3.24□□□□□ -1.89
ITGB1-201ENST00000302278 LITAFQ99732 161 aa3.23□□□□□ -1.89
ITGB1-201ENST00000302278 C6orf99Q4VX62 202 aa3.22□□□□□ -1.89
ITGB1-201ENST00000302278 COX7BP24311 80 aa3.22□□□□□ -1.89
ITGB1-201ENST00000302278 CCKP06307 115 aa3.21□□□□□ -1.89
ITGB1-201ENST00000302278 PDE6GP18545 87 aa3.21□□□□□ -1.89
ITGB1-201ENST00000302278 F8WEM9 126 aa3.21□□□□□ -1.9
ITGB1-201ENST00000302278 H3BQ85 93 aa3.2□□□□□ -1.9
ITGB1-201ENST00000302278 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
ITGB1-201ENST00000302278 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
ITGB1-201ENST00000302278 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
ITGB1-201ENST00000302278 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
ITGB1-201ENST00000302278 HRES1P13985 223 aa3.18□□□□□ -1.9
ITGB1-201ENST00000302278 FAM218AQ96MZ4 157 aa3.18□□□□□ -1.9
ITGB1-201ENST00000302278 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
ITGB1-201ENST00000302278 OBSCN-AS1Q96MR7 158 aa3.17□□□□□ -1.9
ITGB1-201ENST00000302278 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
ITGB1-201ENST00000302278 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
ITGB1-201ENST00000302278 IGFL1Q6UW32 110 aa3.16□□□□□ -1.9
ITGB1-201ENST00000302278 KLKP1Q107X0 134 aa3.15□□□□□ -1.9
ITGB1-201ENST00000302278 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.9
ITGB1-201ENST00000302278 H7BZZ5 65 aa3.15□□□□□ -1.9
ITGB1-201ENST00000302278 NREPQ16612 68 aa3.15□□□□□ -1.9
ITGB1-201ENST00000302278 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
ITGB1-201ENST00000302278 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
ITGB1-201ENST00000302278 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
ITGB1-201ENST00000302278 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
ITGB1-201ENST00000302278 CXCL6P80162 114 aa3.14□□□□□ -1.91
ITGB1-201ENST00000302278 BPY2O14599 106 aa3.13□□□□□ -1.91
ITGB1-201ENST00000302278 Q96NJ1 140 aa3.13□□□□□ -1.91
ITGB1-201ENST00000302278 Q6ZVQ6 151 aa3.13□□□□□ -1.91
ITGB1-201ENST00000302278 NOTCH2NLQ7Z3S9 236 aa3.13□□□□□ -1.91
ITGB1-201ENST00000302278 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
ITGB1-201ENST00000302278 RBM12B-AS1Q9P1G2 102 aa3.12□□□□□ -1.91
ITGB1-201ENST00000302278 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
ITGB1-201ENST00000302278 A8MWP4 228 aa3.12□□□□□ -1.91
ITGB1-201ENST00000302278 Q6ZQY7 126 aa3.11□□□□□ -1.91
ITGB1-201ENST00000302278 MP68P56378 58 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 NDUFB1O75438 58 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 LINC00575Q6W349 94 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 Q6ZQT0 140 aa3.1□□□□□ -1.91
ITGB1-201ENST00000302278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-201ENST00000302278 PSPHP1O15172 72 aa3.08□□□□□ -1.92
ITGB1-201ENST00000302278 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms