RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 DSCR10P59022 87 aa15.17■□□□□ 0.02
CHCHD4-201ENST00000295767 IGHV6-1A0A0B4J1U7 121 aa15.16■□□□□ 0.02
CHCHD4-201ENST00000295767 XP32Q5T750 250 aa15.15■□□□□ 0.02
CHCHD4-201ENST00000295767 IGKV3D-7A0A0C4DH55 119 aa15.14■□□□□ 0.01
CHCHD4-201ENST00000295767 NDUFB1O75438 58 aa15.14■□□□□ 0.01
CHCHD4-201ENST00000295767 J3QR89 54 aa15.13■□□□□ 0.01
CHCHD4-201ENST00000295767 NOTCH2NLQ7Z3S9 236 aa15.11■□□□□ 0.01
CHCHD4-201ENST00000295767 LINC00313P59037 77 aa15.1■□□□□ 0.01
CHCHD4-201ENST00000295767 K7EQZ3 153 aa15.09■□□□□ 0.01
CHCHD4-201ENST00000295767 PRR15Q8IV56 129 aa15.08■□□□□ 0
CHCHD4-201ENST00000295767 C8orf87E5RJ46 101 aa15.06■□□□□ 0
CHCHD4-201ENST00000295767 Q8N9L7 120 aa15.03■□□□□ -0
CHCHD4-201ENST00000295767 C8orf17Q9NRJ1 99 aa15.01□□□□□ -0.01
CHCHD4-201ENST00000295767 KRTAP16-1A8MUX0 517 aa15□□□□□ -0.01
CHCHD4-201ENST00000295767 CXCL6P80162 114 aa15□□□□□ -0.01
CHCHD4-201ENST00000295767 K7ERU9 68 aa14.95□□□□□ -0.02
CHCHD4-201ENST00000295767 MMP24-AS1A0A0U1RRL7 71 aa14.94□□□□□ -0.02
CHCHD4-201ENST00000295767 RPL37P61927 97 aaKnown RBP14.93□□□□□ -0.02
CHCHD4-201ENST00000295767 LINC00643Q86TS7 51 aa14.92□□□□□ -0.02
CHCHD4-201ENST00000295767 UBR4Q5T4S7 5183 aa14.92□□□□□ -0.02
CHCHD4-201ENST00000295767 ATP5EP2Q5VTU8 51 aa14.92□□□□□ -0.02
CHCHD4-201ENST00000295767 C20orf166-AS1Q96NR2 134 aa14.92□□□□□ -0.02
CHCHD4-201ENST00000295767 Q75L30 129 aa14.91□□□□□ -0.02
CHCHD4-201ENST00000295767 A8MUU9 505 aa14.89□□□□□ -0.03
CHCHD4-201ENST00000295767 SEC61BP60468 96 aaKnown RBP14.85□□□□□ -0.03
CHCHD4-201ENST00000295767 hDV103S1A0JD37 113 aa14.84□□□□□ -0.03
CHCHD4-201ENST00000295767 TMEM254Q8TBM7 123 aa14.82□□□□□ -0.04
CHCHD4-201ENST00000295767 WFDC13Q8IUB5 93 aa14.81□□□□□ -0.04
CHCHD4-201ENST00000295767 PCOTHQ58A44 107 aa14.81□□□□□ -0.04
CHCHD4-201ENST00000295767 MUC17Q685J3 4493 aa14.8□□□□□ -0.04
CHCHD4-201ENST00000295767 MRPL34Q9BQ48 92 aaKnown RBP14.8□□□□□ -0.04
CHCHD4-201ENST00000295767 CASC2Q6XLA1 102 aa14.79□□□□□ -0.04
CHCHD4-201ENST00000295767 HCG22E2RYF7 251 aa14.78□□□□□ -0.04
CHCHD4-201ENST00000295767 Q8N9P0 234 aaPredicted RBP14.78□□□□□ -0.04
CHCHD4-201ENST00000295767 HIST1H4AP62805 103 aaKnown RBP14.75□□□□□ -0.05
CHCHD4-201ENST00000295767 ATP11AUNQ6ZP68 121 aa14.74□□□□□ -0.05
CHCHD4-201ENST00000295767 A0A087WVE0 104 aa14.66□□□□□ -0.06
CHCHD4-201ENST00000295767 NDUFS5O43920 106 aa14.66□□□□□ -0.06
CHCHD4-201ENST00000295767 RNF213Q63HN8 5207 aa14.66□□□□□ -0.06
CHCHD4-201ENST00000295767 KRTAP4-1Q9BYQ7 146 aa14.64□□□□□ -0.07
CHCHD4-201ENST00000295767 ZCCHC13Q8WW36 166 aaKnown RBP14.6□□□□□ -0.07
CHCHD4-201ENST00000295767 MT-ATP8P03928 68 aa14.59□□□□□ -0.07
CHCHD4-201ENST00000295767 MUC2Q02817 5179 aa14.51□□□□□ -0.09
CHCHD4-201ENST00000295767 IMUPQ9GZP8 106 aa14.49□□□□□ -0.09
CHCHD4-201ENST00000295767 Q5W150 140 aa14.45□□□□□ -0.1
CHCHD4-201ENST00000295767 TP53AIP1Q9HCN2 124 aa14.43□□□□□ -0.1
CHCHD4-201ENST00000295767 SPINK7P58062 85 aa14.31□□□□□ -0.12
CHCHD4-201ENST00000295767 FAM236AA0A1B0GUQ0 79 aa14.26□□□□□ -0.13
CHCHD4-201ENST00000295767 FAM236BA0A1B0GV22 79 aa14.26□□□□□ -0.13
CHCHD4-201ENST00000295767 UQCRQO14949 82 aa14.26□□□□□ -0.13
CHCHD4-201ENST00000295767 SCGB1A1P11684 91 aa14.26□□□□□ -0.13
CHCHD4-201ENST00000295767 OCR1Q9BZK8 76 aa14.26□□□□□ -0.13
CHCHD4-201ENST00000295767 TRAV22A0A0B4J277 110 aa14.23□□□□□ -0.13
CHCHD4-201ENST00000295767 IGKV2D-30A0A075B6S6 120 aa14.23□□□□□ -0.13
CHCHD4-201ENST00000295767 IGKV2-30P06310 120 aa14.23□□□□□ -0.13
CHCHD4-201ENST00000295767 HRES1P13985 223 aa14.21□□□□□ -0.13
CHCHD4-201ENST00000295767 C7orf65Q6ZTY9 151 aa14.2□□□□□ -0.14
CHCHD4-201ENST00000295767 KRTAP19-2Q3LHN2 52 aa14.17□□□□□ -0.14
CHCHD4-201ENST00000295767 A0A0U1RQV1 116 aa14.15□□□□□ -0.14
CHCHD4-201ENST00000295767 H0Y9P7 68 aa14.15□□□□□ -0.14
CHCHD4-201ENST00000295767 MPLKIPQ8TAP9 179 aa14.12□□□□□ -0.15
CHCHD4-201ENST00000295767 ATOX1O00244 68 aa14.08□□□□□ -0.15
CHCHD4-201ENST00000295767 LCE2CQ5TA81 110 aa14.07□□□□□ -0.16
CHCHD4-201ENST00000295767 FAT4Q6V0I7 4981 aa14.05□□□□□ -0.16
CHCHD4-201ENST00000295767 LOC101927531A0A1B0GV80 90 aa14.04□□□□□ -0.16
CHCHD4-201ENST00000295767 C5orf47Q569G3 176 aa14.04□□□□□ -0.16
CHCHD4-201ENST00000295767 COX6B2Q6YFQ2 88 aa14.04□□□□□ -0.16
CHCHD4-201ENST00000295767 SMIM20Q8N5G0 67 aa14.04□□□□□ -0.16
CHCHD4-201ENST00000295767 RBM12B-AS1Q9P1G2 102 aa14.04□□□□□ -0.16
CHCHD4-201ENST00000295767 MP68P56378 58 aa14.02□□□□□ -0.16
CHCHD4-201ENST00000295767 CYP4F30PQ9H0H9 118 aa14.02□□□□□ -0.16
CHCHD4-201ENST00000295767 TRAV7A0A075B6U4 112 aa14.01□□□□□ -0.17
CHCHD4-201ENST00000295767 PCP4P48539 62 aa14.01□□□□□ -0.17
CHCHD4-201ENST00000295767 LINC00208Q96KT6 92 aa14□□□□□ -0.17
CHCHD4-201ENST00000295767 C1orf64Q8NEQ6 169 aa13.99□□□□□ -0.17
CHCHD4-201ENST00000295767 FAM236DA0A1B0GTK5 79 aa13.97□□□□□ -0.17
CHCHD4-201ENST00000295767 FAM236CP0DP71 79 aa13.97□□□□□ -0.17
CHCHD4-201ENST00000295767 H3BPC8 53 aa13.91□□□□□ -0.18
CHCHD4-201ENST00000295767 C4orf26Q17RF5 130 aa13.91□□□□□ -0.18
CHCHD4-201ENST00000295767 SERP2Q8N6R1 65 aa13.86□□□□□ -0.19
CHCHD4-201ENST00000295767 MT1HP80294 61 aa13.83□□□□□ -0.2
CHCHD4-201ENST00000295767 LCE2AQ5TA79 106 aaPredicted RBP13.82□□□□□ -0.2
CHCHD4-201ENST00000295767 KLKP1Q107X0 134 aa13.81□□□□□ -0.2
CHCHD4-201ENST00000295767 FLGP20930 4061 aaPredicted RBP13.76□□□□□ -0.21
CHCHD4-201ENST00000295767 ANAPC13Q9BS18 74 aa13.75□□□□□ -0.21
CHCHD4-201ENST00000295767 KRTAP3-1Q9BYR8 98 aa13.72□□□□□ -0.21
CHCHD4-201ENST00000295767 H1FX-AS1Q4G0G2 97 aa13.7□□□□□ -0.22
CHCHD4-201ENST00000295767 C20orf197Q8N268 126 aa13.68□□□□□ -0.22
CHCHD4-201ENST00000295767 SNURFQ9Y675 71 aa13.68□□□□□ -0.22
CHCHD4-201ENST00000295767 COX7CP15954 63 aa13.67□□□□□ -0.22
CHCHD4-201ENST00000295767 M0R2T5 61 aa13.62□□□□□ -0.23
CHCHD4-201ENST00000295767 A8MUN3 132 aa13.48□□□□□ -0.25
CHCHD4-201ENST00000295767 CCDC179H3BU77 68 aa13.46□□□□□ -0.26
CHCHD4-201ENST00000295767 S4R3F8 94 aa13.45□□□□□ -0.26
CHCHD4-201ENST00000295767 KRTAP10-6P60371 365 aaPredicted RBP13.43□□□□□ -0.26
CHCHD4-201ENST00000295767 DMAC1Q96GE9 116 aa13.42□□□□□ -0.26
CHCHD4-201ENST00000295767 LCA10Q71F78 164 aa13.39□□□□□ -0.27
CHCHD4-201ENST00000295767 CYSTM1Q9H1C7 97 aa13.39□□□□□ -0.27
CHCHD4-201ENST00000295767 LORP23490 312 aaPredicted RBP13.38□□□□□ -0.27
CHCHD4-201ENST00000295767 SPANXA2-OT1Q8N9U9 137 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms