RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 BPY2O14599 106 aa10.6□□□□□ -0.71
SDF4-201ENST00000263741 NDUFC1O43677 76 aa10.59□□□□□ -0.71
SDF4-201ENST00000263741 A0A0G2JQZ4 141 aa10.58□□□□□ -0.72
SDF4-201ENST00000263741 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
SDF4-201ENST00000263741 SSBP3-AS1Q7Z2R9 100 aa10.57□□□□□ -0.72
SDF4-201ENST00000263741 H7BZZ5 65 aa10.56□□□□□ -0.72
SDF4-201ENST00000263741 IGKV4-1P06312 121 aa10.56□□□□□ -0.72
SDF4-201ENST00000263741 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
SDF4-201ENST00000263741 HRCT1Q6UXD1 115 aa10.54□□□□□ -0.72
SDF4-201ENST00000263741 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
SDF4-201ENST00000263741 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
SDF4-201ENST00000263741 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
SDF4-201ENST00000263741 F8WEM9 126 aa10.52□□□□□ -0.73
SDF4-201ENST00000263741 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
SDF4-201ENST00000263741 Q8N9L7 120 aa10.51□□□□□ -0.73
SDF4-201ENST00000263741 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
SDF4-201ENST00000263741 TMEM254Q8TBM7 123 aa10.49□□□□□ -0.73
SDF4-201ENST00000263741 PRO0628Q9UI54 55 aa10.49□□□□□ -0.73
SDF4-201ENST00000263741 SPINK1P00995 79 aa10.48□□□□□ -0.73
SDF4-201ENST00000263741 PRR4Q16378 134 aa10.47□□□□□ -0.73
SDF4-201ENST00000263741 OCR1Q9BZK8 76 aa10.45□□□□□ -0.74
SDF4-201ENST00000263741 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
SDF4-201ENST00000263741 LPAP08519 4548 aa10.43□□□□□ -0.74
SDF4-201ENST00000263741 IGLV8-61A0A075B6I0 122 aa10.43□□□□□ -0.74
SDF4-201ENST00000263741 C4orf26Q17RF5 130 aa10.42□□□□□ -0.74
SDF4-201ENST00000263741 LRP2P98164 4655 aa10.4□□□□□ -0.74
SDF4-201ENST00000263741 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
SDF4-201ENST00000263741 Q5XG85 94 aa10.39□□□□□ -0.75
SDF4-201ENST00000263741 RPS29P62273 56 aaKnown RBP10.38□□□□□ -0.75
SDF4-201ENST00000263741 CD164Q04900 197 aa10.38□□□□□ -0.75
SDF4-201ENST00000263741 LIMD2Q9BT23 127 aa10.35□□□□□ -0.75
SDF4-201ENST00000263741 SMIM26A0A096LP01 95 aa10.34□□□□□ -0.75
SDF4-201ENST00000263741 DSCR10P59022 87 aa10.34□□□□□ -0.75
SDF4-201ENST00000263741 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
SDF4-201ENST00000263741 K7EQZ3 153 aa10.32□□□□□ -0.76
SDF4-201ENST00000263741 HCG22E2RYF7 251 aa10.3□□□□□ -0.76
SDF4-201ENST00000263741 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
SDF4-201ENST00000263741 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
SDF4-201ENST00000263741 A0A087WSZ3 146 aa10.26□□□□□ -0.77
SDF4-201ENST00000263741 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
SDF4-201ENST00000263741 TPRXLQ17RH7 258 aa10.21□□□□□ -0.78
SDF4-201ENST00000263741 KRTAP13-3Q3SY46 172 aa10.19□□□□□ -0.78
SDF4-201ENST00000263741 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
SDF4-201ENST00000263741 NDUFB1O75438 58 aa10.17□□□□□ -0.78
SDF4-201ENST00000263741 MP68P56378 58 aa10.17□□□□□ -0.78
SDF4-201ENST00000263741 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
SDF4-201ENST00000263741 DEFB116Q30KQ4 102 aa10.16□□□□□ -0.78
SDF4-201ENST00000263741 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
SDF4-201ENST00000263741 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
SDF4-201ENST00000263741 A8MWP4 228 aa10.13□□□□□ -0.79
SDF4-201ENST00000263741 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
SDF4-201ENST00000263741 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
SDF4-201ENST00000263741 Q96NJ1 140 aa10.11□□□□□ -0.79
SDF4-201ENST00000263741 H3BPC8 53 aa10.1□□□□□ -0.79
SDF4-201ENST00000263741 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
SDF4-201ENST00000263741 hDV103S1A0JD37 113 aa10.08□□□□□ -0.8
SDF4-201ENST00000263741 H3BS24 57 aa10.08□□□□□ -0.8
SDF4-201ENST00000263741 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
SDF4-201ENST00000263741 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
SDF4-201ENST00000263741 XP32Q5T750 250 aa10.05□□□□□ -0.8
SDF4-201ENST00000263741 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
SDF4-201ENST00000263741 H0Y9P7 68 aa10.04□□□□□ -0.8
SDF4-201ENST00000263741 C1orf64Q8NEQ6 169 aa10.03□□□□□ -0.8
SDF4-201ENST00000263741 LINC00208Q96KT6 92 aa10.03□□□□□ -0.8
SDF4-201ENST00000263741 RNF213Q63HN8 5207 aa9.99□□□□□ -0.81
SDF4-201ENST00000263741 SPANXA2-OT1Q8N9U9 137 aa9.98□□□□□ -0.81
SDF4-201ENST00000263741 PMAIP1Q13794 54 aa9.98□□□□□ -0.81
SDF4-201ENST00000263741 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
SDF4-201ENST00000263741 MUC17Q685J3 4493 aa9.95□□□□□ -0.82
SDF4-201ENST00000263741 Q1T7F1 81 aa9.95□□□□□ -0.82
SDF4-201ENST00000263741 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
SDF4-201ENST00000263741 BRK1Q8WUW1 75 aa9.93□□□□□ -0.82
SDF4-201ENST00000263741 MUC2Q02817 5179 aa9.9□□□□□ -0.82
SDF4-201ENST00000263741 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
SDF4-201ENST00000263741 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
SDF4-201ENST00000263741 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
SDF4-201ENST00000263741 SEC61BP60468 96 aaKnown RBP9.86□□□□□ -0.83
SDF4-201ENST00000263741 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
SDF4-201ENST00000263741 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
SDF4-201ENST00000263741 PCOTHQ58A44 107 aa9.85□□□□□ -0.83
SDF4-201ENST00000263741 LINC00313P59037 77 aa9.83□□□□□ -0.84
SDF4-201ENST00000263741 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
SDF4-201ENST00000263741 NDUFS5O43920 106 aa9.8□□□□□ -0.84
SDF4-201ENST00000263741 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
SDF4-201ENST00000263741 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
SDF4-201ENST00000263741 Q75L30 129 aa9.77□□□□□ -0.85
SDF4-201ENST00000263741 PSPHP1O15172 72 aa9.76□□□□□ -0.85
SDF4-201ENST00000263741 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
SDF4-201ENST00000263741 A8MUU9 505 aa9.74□□□□□ -0.85
SDF4-201ENST00000263741 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
SDF4-201ENST00000263741 COA5Q86WW8 74 aa9.73□□□□□ -0.85
SDF4-201ENST00000263741 A8MUN3 132 aa9.69□□□□□ -0.86
SDF4-201ENST00000263741 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
SDF4-201ENST00000263741 Q8N9P0 234 aaPredicted RBP9.69□□□□□ -0.86
SDF4-201ENST00000263741 LOC101927531A0A1B0GV80 90 aa9.67□□□□□ -0.86
SDF4-201ENST00000263741 Q5VV11 94 aa9.65□□□□□ -0.87
SDF4-201ENST00000263741 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
SDF4-201ENST00000263741 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
SDF4-201ENST00000263741 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
SDF4-201ENST00000263741 A0A0A0MQY5 61 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms