RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 C14orf132Q9NPU4 83 aa9.44□□□□□ -0.9
SNRPA1-201ENST00000254193 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
SNRPA1-201ENST00000254193 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
SNRPA1-201ENST00000254193 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
SNRPA1-201ENST00000254193 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
SNRPA1-201ENST00000254193 PDE6GP18545 87 aa9.4□□□□□ -0.9
SNRPA1-201ENST00000254193 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
SNRPA1-201ENST00000254193 H3BT86 120 aa9.37□□□□□ -0.91
SNRPA1-201ENST00000254193 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
SNRPA1-201ENST00000254193 A0A1B0GW54 56 aa9.36□□□□□ -0.91
SNRPA1-201ENST00000254193 J3KT08 172 aa9.35□□□□□ -0.91
SNRPA1-201ENST00000254193 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
SNRPA1-201ENST00000254193 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
SNRPA1-201ENST00000254193 MT1HP80294 61 aa9.33□□□□□ -0.92
SNRPA1-201ENST00000254193 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
SNRPA1-201ENST00000254193 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
SNRPA1-201ENST00000254193 NDUFB1O75438 58 aa9.28□□□□□ -0.92
SNRPA1-201ENST00000254193 NREPQ16612 68 aa9.27□□□□□ -0.93
SNRPA1-201ENST00000254193 PCP4L1A6NKN8 68 aa9.26□□□□□ -0.93
SNRPA1-201ENST00000254193 A8MWP4 228 aa9.26□□□□□ -0.93
SNRPA1-201ENST00000254193 IGKV3D-7A0A0C4DH55 119 aa9.25□□□□□ -0.93
SNRPA1-201ENST00000254193 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
SNRPA1-201ENST00000254193 K7EP34 96 aa9.22□□□□□ -0.93
SNRPA1-201ENST00000254193 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
SNRPA1-201ENST00000254193 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
SNRPA1-201ENST00000254193 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
SNRPA1-201ENST00000254193 M0R2T5 61 aa9.18□□□□□ -0.94
SNRPA1-201ENST00000254193 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-201ENST00000254193 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
SNRPA1-201ENST00000254193 Q6ZVQ6 151 aa9.14□□□□□ -0.95
SNRPA1-201ENST00000254193 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-201ENST00000254193 K7EQZ3 153 aa9.12□□□□□ -0.95
SNRPA1-201ENST00000254193 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
SNRPA1-201ENST00000254193 BPY2O14599 106 aa9.11□□□□□ -0.95
SNRPA1-201ENST00000254193 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
SNRPA1-201ENST00000254193 HRES1P13985 223 aa9.1□□□□□ -0.95
SNRPA1-201ENST00000254193 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
SNRPA1-201ENST00000254193 MPLKIPQ8TAP9 179 aa9.06□□□□□ -0.96
SNRPA1-201ENST00000254193 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-201ENST00000254193 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 SPINK7P58062 85 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 Q8N9L7 120 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
SNRPA1-201ENST00000254193 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-201ENST00000254193 F8W1H4 67 aa9.03□□□□□ -0.96
SNRPA1-201ENST00000254193 RBM12B-AS1Q9P1G2 102 aa9.03□□□□□ -0.96
SNRPA1-201ENST00000254193 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
SNRPA1-201ENST00000254193 NDUFS5O43920 106 aa9□□□□□ -0.97
SNRPA1-201ENST00000254193 ETDBQ3ZM63 59 aa9□□□□□ -0.97
SNRPA1-201ENST00000254193 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
SNRPA1-201ENST00000254193 CASC2Q6XLA1 102 aa8.95□□□□□ -0.98
SNRPA1-201ENST00000254193 Q5W150 140 aa8.9□□□□□ -0.98
SNRPA1-201ENST00000254193 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
SNRPA1-201ENST00000254193 KRTAP9-6A0A140TA67 174 aa8.86□□□□□ -0.99
SNRPA1-201ENST00000254193 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
SNRPA1-201ENST00000254193 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
SNRPA1-201ENST00000254193 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
SNRPA1-201ENST00000254193 CXCL6P80162 114 aa8.82□□□□□ -1
SNRPA1-201ENST00000254193 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
SNRPA1-201ENST00000254193 MT2AP02795 61 aa8.75□□□□□ -1.01
SNRPA1-201ENST00000254193 ACYP1P07311 99 aa8.75□□□□□ -1.01
SNRPA1-201ENST00000254193 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
SNRPA1-201ENST00000254193 A0A1B0GV90 55 aa8.74□□□□□ -1.01
SNRPA1-201ENST00000254193 FAM240AA0A1B0GVK7 77 aa8.72□□□□□ -1.01
SNRPA1-201ENST00000254193 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
SNRPA1-201ENST00000254193 MT1FP04733 61 aa8.69□□□□□ -1.02
SNRPA1-201ENST00000254193 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SNRPA1-201ENST00000254193 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
SNRPA1-201ENST00000254193 C4orf26Q17RF5 130 aa8.67□□□□□ -1.02
SNRPA1-201ENST00000254193 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
SNRPA1-201ENST00000254193 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.02
SNRPA1-201ENST00000254193 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
SNRPA1-201ENST00000254193 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
SNRPA1-201ENST00000254193 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
SNRPA1-201ENST00000254193 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
SNRPA1-201ENST00000254193 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
SNRPA1-201ENST00000254193 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
SNRPA1-201ENST00000254193 A0A087WVE0 104 aa8.52□□□□□ -1.05
SNRPA1-201ENST00000254193 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
SNRPA1-201ENST00000254193 TRAV22A0A0B4J277 110 aa8.51□□□□□ -1.05
SNRPA1-201ENST00000254193 CYP4F30PQ9H0H9 118 aa8.51□□□□□ -1.05
SNRPA1-201ENST00000254193 UQCRQO14949 82 aa8.47□□□□□ -1.05
SNRPA1-201ENST00000254193 USH2AO75445 5202 aa8.46□□□□□ -1.06
SNRPA1-201ENST00000254193 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
SNRPA1-201ENST00000254193 J3QR89 54 aa8.44□□□□□ -1.06
SNRPA1-201ENST00000254193 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
SNRPA1-201ENST00000254193 S4R3F8 94 aa8.43□□□□□ -1.06
SNRPA1-201ENST00000254193 H0Y9P7 68 aa8.42□□□□□ -1.06
SNRPA1-201ENST00000254193 ATOX1O00244 68 aa8.39□□□□□ -1.07
SNRPA1-201ENST00000254193 LCA10Q71F78 164 aa8.38□□□□□ -1.07
SNRPA1-201ENST00000254193 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
SNRPA1-201ENST00000254193 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
SNRPA1-201ENST00000254193 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
SNRPA1-201ENST00000254193 LINC00208Q96KT6 92 aa8.31□□□□□ -1.08
SNRPA1-201ENST00000254193 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
SNRPA1-201ENST00000254193 MP68P56378 58 aa8.27□□□□□ -1.09
SNRPA1-201ENST00000254193 FAM236AA0A1B0GUQ0 79 aa8.26□□□□□ -1.09
SNRPA1-201ENST00000254193 FAM236BA0A1B0GV22 79 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms