RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CXCL6P80162 114 aa7.77□□□□□ -1.17
VEGFA-201ENST00000230480 C4orf26Q17RF5 130 aa7.77□□□□□ -1.17
VEGFA-201ENST00000230480 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.17
VEGFA-201ENST00000230480 HRCT1Q6UXD1 115 aa7.77□□□□□ -1.17
VEGFA-201ENST00000230480 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
VEGFA-201ENST00000230480 Q6ZQT0 140 aa7.76□□□□□ -1.17
VEGFA-201ENST00000230480 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
VEGFA-201ENST00000230480 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
VEGFA-201ENST00000230480 MUC2Q02817 5179 aa7.76□□□□□ -1.17
VEGFA-201ENST00000230480 H7BZZ5 65 aa7.75□□□□□ -1.17
VEGFA-201ENST00000230480 Q8N377 158 aa7.75□□□□□ -1.17
VEGFA-201ENST00000230480 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
VEGFA-201ENST00000230480 RBM3P98179 157 aaKnown RBP7.74□□□□□ -1.17
VEGFA-201ENST00000230480 LINC00575Q6W349 94 aa7.74□□□□□ -1.17
VEGFA-201ENST00000230480 SPINK1P00995 79 aa7.73□□□□□ -1.17
VEGFA-201ENST00000230480 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
VEGFA-201ENST00000230480 IGLV7-46A0A075B6I9 117 aa7.7□□□□□ -1.18
VEGFA-201ENST00000230480 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
VEGFA-201ENST00000230480 Q6ZVQ6 151 aa7.7□□□□□ -1.18
VEGFA-201ENST00000230480 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
VEGFA-201ENST00000230480 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
VEGFA-201ENST00000230480 LCE2BO14633 110 aa7.67□□□□□ -1.18
VEGFA-201ENST00000230480 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
VEGFA-201ENST00000230480 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
VEGFA-201ENST00000230480 Q6ZQY7 126 aa7.66□□□□□ -1.18
VEGFA-201ENST00000230480 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
VEGFA-201ENST00000230480 TRBV7-4A0A0J9YYF1 115 aa7.64□□□□□ -1.19
VEGFA-201ENST00000230480 F8WEM9 126 aa7.64□□□□□ -1.19
VEGFA-201ENST00000230480 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
VEGFA-201ENST00000230480 CD164Q04900 197 aa7.61□□□□□ -1.19
VEGFA-201ENST00000230480 NREPQ16612 68 aa7.61□□□□□ -1.19
VEGFA-201ENST00000230480 FAT4Q6V0I7 4981 aa7.6□□□□□ -1.19
VEGFA-201ENST00000230480 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
VEGFA-201ENST00000230480 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
VEGFA-201ENST00000230480 A0A1B0GW54 56 aa7.57□□□□□ -1.2
VEGFA-201ENST00000230480 IGFL1Q6UW32 110 aa7.57□□□□□ -1.2
VEGFA-201ENST00000230480 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
VEGFA-201ENST00000230480 SNURFQ9Y675 71 aa7.57□□□□□ -1.2
VEGFA-201ENST00000230480 BPY2O14599 106 aa7.55□□□□□ -1.2
VEGFA-201ENST00000230480 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
VEGFA-201ENST00000230480 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
VEGFA-201ENST00000230480 XP32Q5T750 250 aa7.52□□□□□ -1.21
VEGFA-201ENST00000230480 OCR1Q9BZK8 76 aa7.52□□□□□ -1.21
VEGFA-201ENST00000230480 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
VEGFA-201ENST00000230480 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
VEGFA-201ENST00000230480 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
VEGFA-201ENST00000230480 A0A1W2PNM2 257 aa7.44□□□□□ -1.22
VEGFA-201ENST00000230480 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
VEGFA-201ENST00000230480 V9GYY9 64 aa7.44□□□□□ -1.22
VEGFA-201ENST00000230480 Q1T7F1 81 aa7.42□□□□□ -1.22
VEGFA-201ENST00000230480 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
VEGFA-201ENST00000230480 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
VEGFA-201ENST00000230480 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
VEGFA-201ENST00000230480 Q96NJ1 140 aa7.41□□□□□ -1.22
VEGFA-201ENST00000230480 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.22
VEGFA-201ENST00000230480 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
VEGFA-201ENST00000230480 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
VEGFA-201ENST00000230480 MPLKIPQ8TAP9 179 aa7.36□□□□□ -1.23
VEGFA-201ENST00000230480 A0A087WSZ3 146 aa7.35□□□□□ -1.23
VEGFA-201ENST00000230480 NDUFB1O75438 58 aa7.35□□□□□ -1.23
VEGFA-201ENST00000230480 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
VEGFA-201ENST00000230480 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
VEGFA-201ENST00000230480 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
VEGFA-201ENST00000230480 Q8N9L7 120 aa7.34□□□□□ -1.23
VEGFA-201ENST00000230480 SEC61GP60059 68 aa7.33□□□□□ -1.24
VEGFA-201ENST00000230480 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
VEGFA-201ENST00000230480 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
VEGFA-201ENST00000230480 H3BPC8 53 aa7.29□□□□□ -1.24
VEGFA-201ENST00000230480 LINC00472Q9H8W2 130 aa7.28□□□□□ -1.24
VEGFA-201ENST00000230480 HCG22E2RYF7 251 aa7.27□□□□□ -1.25
VEGFA-201ENST00000230480 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
VEGFA-201ENST00000230480 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
VEGFA-201ENST00000230480 DSCR10P59022 87 aa7.26□□□□□ -1.25
VEGFA-201ENST00000230480 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
VEGFA-201ENST00000230480 MP68P56378 58 aa7.25□□□□□ -1.25
VEGFA-201ENST00000230480 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
VEGFA-201ENST00000230480 TRAV22A0A0B4J277 110 aa7.23□□□□□ -1.25
VEGFA-201ENST00000230480 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
VEGFA-201ENST00000230480 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
VEGFA-201ENST00000230480 Q75L30 129 aa7.21□□□□□ -1.26
VEGFA-201ENST00000230480 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
VEGFA-201ENST00000230480 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
VEGFA-201ENST00000230480 A8MUU9 505 aa7.2□□□□□ -1.26
VEGFA-201ENST00000230480 K7EQZ3 153 aa7.2□□□□□ -1.26
VEGFA-201ENST00000230480 MT1HP80294 61 aa7.15□□□□□ -1.26
VEGFA-201ENST00000230480 Q5VV11 94 aa7.14□□□□□ -1.27
VEGFA-201ENST00000230480 LINC00208Q96KT6 92 aa7.14□□□□□ -1.27
VEGFA-201ENST00000230480 PSPHP1O15172 72 aa7.13□□□□□ -1.27
VEGFA-201ENST00000230480 A8MUN3 132 aa7.12□□□□□ -1.27
VEGFA-201ENST00000230480 H0Y9P7 68 aa7.11□□□□□ -1.27
VEGFA-201ENST00000230480 LINC00313P59037 77 aa7.11□□□□□ -1.27
VEGFA-201ENST00000230480 Q8N9P0 234 aaPredicted RBP7.11□□□□□ -1.27
VEGFA-201ENST00000230480 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
VEGFA-201ENST00000230480 NDUFS5O43920 106 aa7.09□□□□□ -1.27
VEGFA-201ENST00000230480 A0A1B0GVX0 72 aa7.08□□□□□ -1.28
VEGFA-201ENST00000230480 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
VEGFA-201ENST00000230480 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
VEGFA-201ENST00000230480 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
VEGFA-201ENST00000230480 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
VEGFA-201ENST00000230480 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms